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Properties
Property Name | Value |
TranscriptId | 566810 |
Track | FilteredModels2 |
ProteinId | 566724 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_13 | supercontig | scaffold_13:706474..707568 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_5551 ID=mRNA_5551|Name=jgi.p|Nanoce1779_2|566724|organism=Nannochloropsis oceanica|type=mRNA|length=1095bp ATGGTGGACGAGGTCGACTTTGGGAATTTGGCGGGCTCGATCAAACTTGT CCAACTTTCTTACGGGGCATTCAATGAGAGGTGCAAGACACACAAAGGCG ACGAGATAGAAGAAGACGGGGACCGTACCGGGCTGCGAGTCTACACTGGG GCACAAGCCATGGTCCGATTCCTGTACCGCTTCCCATGGCTGATAAAAGG ACAGCGTGTGGTGGAACTGGGATGTGGGGTGGGCGCCGTGGGACTGTTAG CGTCCCGATTGGGGCCGACGTGCGTAGTGCTGACGGACGGAAGTGTAGAA ACGCTGGAACTGACGCAAAGGAACGTGGCTACCTTTCAAGCTTTACCCTC GTTGTCCCCCGGGTTTTCTCCATCTTCGCACGGAAGTACTTCAGCTGTCG CCTCCCTTCCCTCCCTTGCTGTGCACAAGCTGCAGTGGGACTCGCACGCT GCCATCGTTGATTTGTTACACGCGCAAAAAGTGGACAAATTTGATGTTGT GATAGGCACGGACCTCATGTACTATAACGTAGATGCCTCGGTGGTATTGA CGGCCGCGACTTGCTTGCTGGATGGGAGGGTAAAAAAAAGAGAAAAAGAA GGGGGAGGAGGTGGAGGAGGACGAAAGGTGGGAGAAGAGAGCGAACCCCC ATACAAAGTGAACAAAGATGAGCGAGAAGGGTGTACTAACAGCGGACTTG CGTTCGGCAAGAGGAGAAGTGAGAGCGAGGGTAAGGGTGGCATCATCCTC CTCGCGCATATATTCCGCGGAGCCCATCTTCCTTACACACTCTTGGCGGC CGCAGAGTCCCTGGGATGGGCCTTGTTGGAGGTGCCGATGGAGGAGGTCG TCTCGGAGGAAGGGGAGGGAGGGGGGGAGGGAAAAGTACCCGGAACAACG CCGGAGTGGTGGGGGAGCATGTGTGTGTTGGTGGGGGTGAGGGATGGAGG GAGGGAGGAAGGGAAGGAAGAAATGCTTGCGCGTTTGCCGCAGGGGAGTC GGGTTTTTGTGCCATATTGGAAGGAGGGAGGGGAGGGAGGGGGGGAAGAA GACGAGGAGTTGTGGTCCTGGCAGTTACCACGTGCAATAAACTAG back to topprotein sequence of jgi.p|Nanoce1779_2|566724 >mRNA_5551-protein ID=mRNA_5551-protein|Name=jgi.p|Nanoce1779_2|566724|organism=Nannochloropsis oceanica|type=polypeptide|length=365bp MVDEVDFGNLAGSIKLVQLSYGAFNERCKTHKGDEIEEDGDRTGLRVYTG AQAMVRFLYRFPWLIKGQRVVELGCGVGAVGLLASRLGPTCVVLTDGSVE TLELTQRNVATFQALPSLSPGFSPSSHGSTSAVASLPSLAVHKLQWDSHA AIVDLLHAQKVDKFDVVIGTDLMYYNVDASVVLTAATCLLDGRVKKREKE GGGGGGGRKVGEESEPPYKVNKDEREGCTNSGLAFGKRRSESEGKGGIIL LAHIFRGAHLPYTLLAAAESLGWALLEVPMEEVVSEEGEGGGEGKVPGTT PEWWGSMCVLVGVRDGGREEGKEEMLARLPQGSRVFVPYWKEGGEGGGEE DEELWSWQLPRAIN* back to topmRNA from alignment at scaffold_13:706474..707568+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_5551 ID=mRNA_5551|Name=jgi.p|Nanoce1779_2|566724|organism=Nannochloropsis oceanica|type=mRNA|length=1095bp|location=Sequence derived from alignment at scaffold_13:706474..707568+ (Nannochloropsis oceanica) ATGGTGGACGAGGTCGACTTTGGGAATTTGGCGGGCTCGATCAAACTTGT
CCAACTTTCTTACGGGGCATTCAATGAGAGGTGCAAGACACACAAAGGCG
ACGAGATAGAAGAAGACGGGGACCGTACCGGGCTGCGAGTCTACACTGGG
GCACAAGCCATGGTCCGATTCCTGTACCGCTTCCCATGGCTGATAAAAGG
ACAGCGTGTGGTGGAACTGGGATGTGGGGTGGGCGCCGTGGGACTGTTAG
CGTCCCGATTGGGGCCGACGTGCGTAGTGCTGACGGACGGAAGTGTAGAA
ACGCTGGAACTGACGCAAAGGAACGTGGCTACCTTTCAAGCTTTACCCTC
GTTGTCCCCCGGGTTTTCTCCATCTTCGCACGGAAGTACTTCAGCTGTCG
CCTCCCTTCCCTCCCTTGCTGTGCACAAGCTGCAGTGGGACTCGCACGCT
GCCATCGTTGATTTGTTACACGCGCAAAAAGTGGACAAATTTGATGTTGT
GATAGGCACGGACCTCATGTACTATAACGTAGATGCCTCGGTGGTATTGA
CGGCCGCGACTTGCTTGCTGGATGGGAGGGTAAAAAAAAGAGAAAAAGAA
GGGGGAGGAGGTGGAGGAGGACGAAAGGTGGGAGAAGAGAGCGAACCCCC
ATACAAAGTGAACAAAGATGAGCGAGAAGGGTGTACTAACAGCGGACTTG
CGTTCGGCAAGAGGAGAAGTGAGAGCGAGGGTAAGGGTGGCATCATCCTC
CTCGCGCATATATTCCGCGGAGCCCATCTTCCTTACACACTCTTGGCGGC
CGCAGAGTCCCTGGGATGGGCCTTGTTGGAGGTGCCGATGGAGGAGGTCG
TCTCGGAGGAAGGGGAGGGAGGGGGGGAGGGAAAAGTACCCGGAACAACG
CCGGAGTGGTGGGGGAGCATGTGTGTGTTGGTGGGGGTGAGGGATGGAGG
GAGGGAGGAAGGGAAGGAAGAAATGCTTGCGCGTTTGCCGCAGGGGAGTC
GGGTTTTTGTGCCATATTGGAAGGAGGGAGGGGAGGGAGGGGGGGAAGAA
GACGAGGAGTTGTGGTCCTGGCAGTTACCACGTGCAATAAACTAG back to topCoding sequence (CDS) from alignment at scaffold_13:706474..707568+ >mRNA_5551 ID=mRNA_5551|Name=jgi.p|Nanoce1779_2|566724|organism=Nannochloropsis oceanica|type=CDS|length=1095bp|location=Sequence derived from alignment at scaffold_13:706474..707568+ (Nannochloropsis oceanica) ATGGTGGACGAGGTCGACTTTGGGAATTTGGCGGGCTCGATCAAACTTGT CCAACTTTCTTACGGGGCATTCAATGAGAGGTGCAAGACACACAAAGGCG ACGAGATAGAAGAAGACGGGGACCGTACCGGGCTGCGAGTCTACACTGGG GCACAAGCCATGGTCCGATTCCTGTACCGCTTCCCATGGCTGATAAAAGG ACAGCGTGTGGTGGAACTGGGATGTGGGGTGGGCGCCGTGGGACTGTTAG CGTCCCGATTGGGGCCGACGTGCGTAGTGCTGACGGACGGAAGTGTAGAA ACGCTGGAACTGACGCAAAGGAACGTGGCTACCTTTCAAGCTTTACCCTC GTTGTCCCCCGGGTTTTCTCCATCTTCGCACGGAAGTACTTCAGCTGTCG CCTCCCTTCCCTCCCTTGCTGTGCACAAGCTGCAGTGGGACTCGCACGCT GCCATCGTTGATTTGTTACACGCGCAAAAAGTGGACAAATTTGATGTTGT GATAGGCACGGACCTCATGTACTATAACGTAGATGCCTCGGTGGTATTGA CGGCCGCGACTTGCTTGCTGGATGGGAGGGTAAAAAAAAGAGAAAAAGAA GGGGGAGGAGGTGGAGGAGGACGAAAGGTGGGAGAAGAGAGCGAACCCCC ATACAAAGTGAACAAAGATGAGCGAGAAGGGTGTACTAACAGCGGACTTG CGTTCGGCAAGAGGAGAAGTGAGAGCGAGGGTAAGGGTGGCATCATCCTC CTCGCGCATATATTCCGCGGAGCCCATCTTCCTTACACACTCTTGGCGGC CGCAGAGTCCCTGGGATGGGCCTTGTTGGAGGTGCCGATGGAGGAGGTCG TCTCGGAGGAAGGGGAGGGAGGGGGGGAGGGAAAAGTACCCGGAACAACG CCGGAGTGGTGGGGGAGCATGTGTGTGTTGGTGGGGGTGAGGGATGGAGG GAGGGAGGAAGGGAAGGAAGAAATGCTTGCGCGTTTGCCGCAGGGGAGTC GGGTTTTTGTGCCATATTGGAAGGAGGGAGGGGAGGGAGGGGGGGAAGAA GACGAGGAGTTGTGGTCCTGGCAGTTACCACGTGCAATAAACTAG back to top
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