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Properties
Property Name | Value |
TranscriptId | 640027 |
Track | FilteredModels2 |
ProteinId | 639941 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_13 | supercontig | scaffold_13:639799..640821 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_5529 ID=mRNA_5529|Name=jgi.p|Nanoce1779_2|639941|organism=Nannochloropsis oceanica|type=mRNA|length=1023bp ATGTTGGCCTTTCTACCCCCCACGACCACCGTATATCATCATCATATCAT CAGTACGAAAGCGTCGTCCTCGTCTGCCTCCTTTTCTTCTGCTCCGTCCT CTCTATTGGCCTCCACCTCCACCAGCAGTAGCAGCAGTAGCTCTCGCCGG GACCTTGTCGAGAACATCGGGCGTCTTGGTCTGGGCTTGGGCGCGCTCAC CCTCCTCCCCTCCCTCACCGTCTCCGCCGCAGCCGACCGTAGCGCACCGA TTGCCGTCCTCGGTGCCCGCGGCAAGACGGGCAAGCTCATCGTGCAACAA CTCCTGGCGCAAGGGAAGTGCGTGCGTGCACTCTCCTACCAACCCTTTGA GTACGACAAAAAGGACATTCCCTCGGGCGTGGACGTTTCCAGCCTTCTCA CTTACGCCATTGGTGACGTAACCAAGCCTGAAACTCTTTCTCCCGCCATC AAGGGAGCGAGTGCGGTTATTTTCGCGGCGTCAGCAAGTAAAAACGGCGG GAAAGCCCAAGCCGTGGATTGTGACGGTGTCGAGAACATCGCCCGTTCTT GCATCGCGGAGAAGATTCCTCGGCTCCTCGTTATTTCCTCGGGGGCTGTC ACCAAGCCCGATTCATTCGGGTATAAAGTTACGAATTTGTTCGCACGGGG GATCATGGGCCTGAAGCTGGAGGGCGAGAACAGGCTGCGTGCCCTCTATG CTTCCTCTGCCCCTCCTGGAGTCACCTATACCGTCCTCCGTCCGGGAGGC CTGTCAAATGACAAGGGGCTAGGAGTTTCTGGAATAGAGCTCAATCAGAA GGATACGATCATTGGGGAGATTTCCCGGGTGGATGTGGCAGCGACCGCGG TAGCAGCAATAGGAGCAGCAGACGCAGCAGATGTGACTTTCGAGGTGTAT GAAATCGGGAGGAGGACACCACTGCAGAAGGAGTTTCCTGAGAAGAGCGG GATGGAAAGGAGGGCGGGGACATGGGAGGAGATCTTCAAGGGTTTGGTGA AGGATAGCGCGCTGCAGGTATAG back to topprotein sequence of jgi.p|Nanoce1779_2|639941 >mRNA_5529-protein ID=mRNA_5529-protein|Name=jgi.p|Nanoce1779_2|639941|organism=Nannochloropsis oceanica|type=polypeptide|length=341bp MLAFLPPTTTVYHHHIISTKASSSSASFSSAPSSLLASTSTSSSSSSSRR DLVENIGRLGLGLGALTLLPSLTVSAAADRSAPIAVLGARGKTGKLIVQQ LLAQGKCVRALSYQPFEYDKKDIPSGVDVSSLLTYAIGDVTKPETLSPAI KGASAVIFAASASKNGGKAQAVDCDGVENIARSCIAEKIPRLLVISSGAV TKPDSFGYKVTNLFARGIMGLKLEGENRLRALYASSAPPGVTYTVLRPGG LSNDKGLGVSGIELNQKDTIIGEISRVDVAATAVAAIGAADAADVTFEVY EIGRRTPLQKEFPEKSGMERRAGTWEEIFKGLVKDSALQV* back to topmRNA from alignment at scaffold_13:639799..640821+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_5529 ID=mRNA_5529|Name=jgi.p|Nanoce1779_2|639941|organism=Nannochloropsis oceanica|type=mRNA|length=1023bp|location=Sequence derived from alignment at scaffold_13:639799..640821+ (Nannochloropsis oceanica) ATGTTGGCCTTTCTACCCCCCACGACCACCGTATATCATCATCATATCAT
CAGTACGAAAGCGTCGTCCTCGTCTGCCTCCTTTTCTTCTGCTCCGTCCT
CTCTATTGGCCTCCACCTCCACCAGCAGTAGCAGCAGTAGCTCTCGCCGG
GACCTTGTCGAGAACATCGGGCGTCTTGGTCTGGGCTTGGGCGCGCTCAC
CCTCCTCCCCTCCCTCACCGTCTCCGCCGCAGCCGACCGTAGCGCACCGA
TTGCCGTCCTCGGTGCCCGCGGCAAGACGGGCAAGCTCATCGTGCAACAA
CTCCTGGCGCAAGGGAAGTGCGTGCGTGCACTCTCCTACCAACCCTTTGA
GTACGACAAAAAGGACATTCCCTCGGGCGTGGACGTTTCCAGCCTTCTCA
CTTACGCCATTGGTGACGTAACCAAGCCTGAAACTCTTTCTCCCGCCATC
AAGGGAGCGAGTGCGGTTATTTTCGCGGCGTCAGCAAGTAAAAACGGCGG
GAAAGCCCAAGCCGTGGATTGTGACGGTGTCGAGAACATCGCCCGTTCTT
GCATCGCGGAGAAGATTCCTCGGCTCCTCGTTATTTCCTCGGGGGCTGTC
ACCAAGCCCGATTCATTCGGGTATAAAGTTACGAATTTGTTCGCACGGGG
GATCATGGGCCTGAAGCTGGAGGGCGAGAACAGGCTGCGTGCCCTCTATG
CTTCCTCTGCCCCTCCTGGAGTCACCTATACCGTCCTCCGTCCGGGAGGC
CTGTCAAATGACAAGGGGCTAGGAGTTTCTGGAATAGAGCTCAATCAGAA
GGATACGATCATTGGGGAGATTTCCCGGGTGGATGTGGCAGCGACCGCGG
TAGCAGCAATAGGAGCAGCAGACGCAGCAGATGTGACTTTCGAGGTGTAT
GAAATCGGGAGGAGGACACCACTGCAGAAGGAGTTTCCTGAGAAGAGCGG
GATGGAAAGGAGGGCGGGGACATGGGAGGAGATCTTCAAGGGTTTGGTGA
AGGATAGCGCGCTGCAGGTATAG back to topCoding sequence (CDS) from alignment at scaffold_13:639799..640821+ >mRNA_5529 ID=mRNA_5529|Name=jgi.p|Nanoce1779_2|639941|organism=Nannochloropsis oceanica|type=CDS|length=1023bp|location=Sequence derived from alignment at scaffold_13:639799..640821+ (Nannochloropsis oceanica) ATGTTGGCCTTTCTACCCCCCACGACCACCGTATATCATCATCATATCAT CAGTACGAAAGCGTCGTCCTCGTCTGCCTCCTTTTCTTCTGCTCCGTCCT CTCTATTGGCCTCCACCTCCACCAGCAGTAGCAGCAGTAGCTCTCGCCGG GACCTTGTCGAGAACATCGGGCGTCTTGGTCTGGGCTTGGGCGCGCTCAC CCTCCTCCCCTCCCTCACCGTCTCCGCCGCAGCCGACCGTAGCGCACCGA TTGCCGTCCTCGGTGCCCGCGGCAAGACGGGCAAGCTCATCGTGCAACAA CTCCTGGCGCAAGGGAAGTGCGTGCGTGCACTCTCCTACCAACCCTTTGA GTACGACAAAAAGGACATTCCCTCGGGCGTGGACGTTTCCAGCCTTCTCA CTTACGCCATTGGTGACGTAACCAAGCCTGAAACTCTTTCTCCCGCCATC AAGGGAGCGAGTGCGGTTATTTTCGCGGCGTCAGCAAGTAAAAACGGCGG GAAAGCCCAAGCCGTGGATTGTGACGGTGTCGAGAACATCGCCCGTTCTT GCATCGCGGAGAAGATTCCTCGGCTCCTCGTTATTTCCTCGGGGGCTGTC ACCAAGCCCGATTCATTCGGGTATAAAGTTACGAATTTGTTCGCACGGGG GATCATGGGCCTGAAGCTGGAGGGCGAGAACAGGCTGCGTGCCCTCTATG CTTCCTCTGCCCCTCCTGGAGTCACCTATACCGTCCTCCGTCCGGGAGGC CTGTCAAATGACAAGGGGCTAGGAGTTTCTGGAATAGAGCTCAATCAGAA GGATACGATCATTGGGGAGATTTCCCGGGTGGATGTGGCAGCGACCGCGG TAGCAGCAATAGGAGCAGCAGACGCAGCAGATGTGACTTTCGAGGTGTAT GAAATCGGGAGGAGGACACCACTGCAGAAGGAGTTTCCTGAGAAGAGCGG GATGGAAAGGAGGGCGGGGACATGGGAGGAGATCTTCAAGGGTTTGGTGA AGGATAGCGCGCTGCAGGTATAG back to top
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