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Properties
Property Name | Value |
TranscriptId | 592919 |
Track | FilteredModels2 |
ProteinId | 592833 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_13 | supercontig | scaffold_13:628789..630039 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_5524 ID=mRNA_5524|Name=jgi.p|Nanoce1779_2|592833|organism=Nannochloropsis oceanica|type=mRNA|length=1251bp GCCAATCCACTCTTTGCCTCCTTCTTATTTCTCATCCTCATCGCCATCCT TCAATGCCACGTGCTGGTACAGTAAGGGTGATGTGGAAGCGGAGGAGAAA GCGGAAAGGGAGCAAAAGCTGAAGGAGAAGAAGGAGGACGAGGACGAAGA CTACTTCGACGCCCTCTCTCCCTCCAGCACCAGTAGCTCCCCCCATGAGG ACAATCCGCGCCCGAAGCAGCACCAGCATTGGCAGCAAGAGCACCAGGAC AATGACACCACCTTTTCGACTGGAGAAGAAGTTGAGCGCCCTACGACTCA CGTCTATCCTTGCGAATTGTGTGGGCGCAGCTTCAATCAACGCGCCCTCT CGGTGCACTCTCGTGTGTGTCAGAAAGTATTCATTTCGACCCGTCCTAGG TTTGACTCGCGACAGCGACGGACTCAAGGAACGGAAGCAGAAAAATATGT GAAGCAGCAGCTGATGCGCCCTCTTGTGAACAGACGGTTGGGAGGAGTGG GAGGAGGGACGGGTAGTGCTGCTGCTGTGAGTGGTAGCACGGAAAATCAA AGAATGATGAAAAAAAGGACGGCAGCCTCCGCAGGGACAGCCTGGTCACA GTCACAAGCTGCATCTGTCGCTTGTCTGGCGCGTTGTCGCCAGAGAGAGG AGCAGCAGCAGGAGAAGAAAGAGGTGGATCGGACGGACATAGCCACACTC GCAGCCACGCGCAGACCACTGCCGCAGAAACAGGTCAAAAGACAATATAT CACGGGCACCACATTTTCATCCCTCCCCTCCGTTTCCCTCGACTCCACTG CTGCCGCCATCCCTGCCGCCGAAGATGGCAAGAAATGGCTCCAGCAATCC CAAGGCTTCCGGGCCATGCTCAAGGCAAACCGTCGCGTCGCGCAAGCCGA GAAGGAGGGCCGTCCAGTTAGCCCCACTCTCCTTGCAGCTCTCTCATCAT CCGCCGCTGCTGCATCTGGGATGCAGTCACAGAGCTTGGTCCCTTGCCCG CATTGCCTACGAAAATACAATGAGCAGGCTGCCGCACGACATATCCCCAA GTGCAAAGACATCAGGGCCAAGCCTAGTCGGTTACACAAGGGACAAGGAA TGCTGTTGGGAGCCCGGCATCGTGTGGTCAAGGAGAGTTGGGGGGGAAGG GTGGTCGGTGGAAGGTTTGATGCAGGGGGAGGTTCTGCGGAAACGCGGGG AGGCAGAGGTGGGCGACGAGGATGACTTTGAAGTAGACATGTAAGAAGCT A back to topprotein sequence of jgi.p|Nanoce1779_2|592833 >mRNA_5524-protein ID=mRNA_5524-protein|Name=jgi.p|Nanoce1779_2|592833|organism=Nannochloropsis oceanica|type=polypeptide|length=254bp MRPLVNRRLGGVGGGTGSAAAVSGSTENQRMMKKRTAASAGTAWSQSQAA SVACLARCRQREEQQQEKKEVDRTDIATLAATRRPLPQKQVKRQYITGTT FSSLPSVSLDSTAAAIPAAEDGKKWLQQSQGFRAMLKANRRVAQAEKEGR PVSPTLLAALSSSAAAASGMQSQSLVPCPHCLRKYNEQAAARHIPKCKDI RAKPSRLHKGQGMLLGARHRVVKESWGGRVVGGRFDAGGGSAETRGGRGG RRG* back to topmRNA from alignment at scaffold_13:628789..630039+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_5524 ID=mRNA_5524|Name=jgi.p|Nanoce1779_2|592833|organism=Nannochloropsis oceanica|type=mRNA|length=1251bp|location=Sequence derived from alignment at scaffold_13:628789..630039+ (Nannochloropsis oceanica) GCCAATCCACTCTTTGCCTCCTTCTTATTTCTCATCCTCATCGCCATCCT
TCAATGCCACGTGCTGGTACAGTAAGGGTGATGTGGAAGCGGAGGAGAAA
GCGGAAAGGGAGCAAAAGCTGAAGGAGAAGAAGGAGGACGAGGACGAAGA
CTACTTCGACGCCCTCTCTCCCTCCAGCACCAGTAGCTCCCCCCATGAGG
ACAATCCGCGCCCGAAGCAGCACCAGCATTGGCAGCAAGAGCACCAGGAC
AATGACACCACCTTTTCGACTGGAGAAGAAGTTGAGCGCCCTACGACTCA
CGTCTATCCTTGCGAATTGTGTGGGCGCAGCTTCAATCAACGCGCCCTCT
CGGTGCACTCTCGTGTGTGTCAGAAAGTATTCATTTCGACCCGTCCTAGG
TTTGACTCGCGACAGCGACGGACTCAAGGAACGGAAGCAGAAAAATATGT
GAAGCAGCAGCTGATGCGCCCTCTTGTGAACAGACGGTTGGGAGGAGTGG
GAGGAGGGACGGGTAGTGCTGCTGCTGTGAGTGGTAGCACGGAAAATCAA
AGAATGATGAAAAAAAGGACGGCAGCCTCCGCAGGGACAGCCTGGTCACA
GTCACAAGCTGCATCTGTCGCTTGTCTGGCGCGTTGTCGCCAGAGAGAGG
AGCAGCAGCAGGAGAAGAAAGAGGTGGATCGGACGGACATAGCCACACTC
GCAGCCACGCGCAGACCACTGCCGCAGAAACAGGTCAAAAGACAATATAT
CACGGGCACCACATTTTCATCCCTCCCCTCCGTTTCCCTCGACTCCACTG
CTGCCGCCATCCCTGCCGCCGAAGATGGCAAGAAATGGCTCCAGCAATCC
CAAGGCTTCCGGGCCATGCTCAAGGCAAACCGTCGCGTCGCGCAAGCCGA
GAAGGAGGGCCGTCCAGTTAGCCCCACTCTCCTTGCAGCTCTCTCATCAT
CCGCCGCTGCTGCATCTGGGATGCAGTCACAGAGCTTGGTCCCTTGCCCG
CATTGCCTACGAAAATACAATGAGCAGGCTGCCGCACGACATATCCCCAA
GTGCAAAGACATCAGGGCCAAGCCTAGTCGGTTACACAAGGGACAAGGAA
TGCTGTTGGGAGCCCGGCATCGTGTGGTCAAGGAGAGTTGGGGGGGAAGG
GTGGTCGGTGGAAGGTTTGATGCAGGGGGAGGTTCTGCGGAAACGCGGGG
AGGCAGAGGTGGGCGACGAGGATGACTTTGAAGTAGACATGTAAGAAGCT
A back to topCoding sequence (CDS) from alignment at scaffold_13:628789..630039+ >mRNA_5524 ID=mRNA_5524|Name=jgi.p|Nanoce1779_2|592833|organism=Nannochloropsis oceanica|type=CDS|length=762bp|location=Sequence derived from alignment at scaffold_13:628789..630039+ (Nannochloropsis oceanica) ATGCGCCCTCTTGTGAACAGACGGTTGGGAGGAGTGGGAGGAGGGACGGG TAGTGCTGCTGCTGTGAGTGGTAGCACGGAAAATCAAAGAATGATGAAAA AAAGGACGGCAGCCTCCGCAGGGACAGCCTGGTCACAGTCACAAGCTGCA TCTGTCGCTTGTCTGGCGCGTTGTCGCCAGAGAGAGGAGCAGCAGCAGGA GAAGAAAGAGGTGGATCGGACGGACATAGCCACACTCGCAGCCACGCGCA GACCACTGCCGCAGAAACAGGTCAAAAGACAATATATCACGGGCACCACA TTTTCATCCCTCCCCTCCGTTTCCCTCGACTCCACTGCTGCCGCCATCCC TGCCGCCGAAGATGGCAAGAAATGGCTCCAGCAATCCCAAGGCTTCCGGG CCATGCTCAAGGCAAACCGTCGCGTCGCGCAAGCCGAGAAGGAGGGCCGT CCAGTTAGCCCCACTCTCCTTGCAGCTCTCTCATCATCCGCCGCTGCTGC ATCTGGGATGCAGTCACAGAGCTTGGTCCCTTGCCCGCATTGCCTACGAA AATACAATGAGCAGGCTGCCGCACGACATATCCCCAAGTGCAAAGACATC AGGGCCAAGCCTAGTCGGTTACACAAGGGACAAGGAATGCTGTTGGGAGC CCGGCATCGTGTGGTCAAGGAGAGTTGGGGGGGAAGGGTGGTCGGTGGAA GGTTTGATGCAGGGGGAGGTTCTGCGGAAACGCGGGGAGGCAGAGGTGGG CGACGAGGATGA back to top
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