Properties
| Property Name | Value |
|---|
| TranscriptId | 631178 |
| Track | FilteredModels2 |
| ProteinId | 631092 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_13 | supercontig | scaffold_13:519045..521106 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_5482 ID=mRNA_5482|Name=jgi.p|Nanoce1779_2|631092|organism=Nannochloropsis oceanica|type=mRNA|length=1126bp
GGGAAGCTGTTGGGGTCTAATCTTACGCCCACTTGTGCTTTTACCCTTCA
GAGACACAGTACGCGCAGCATGGCGTCCTTGTCTTCCTCGTCGTCATCGT
TGGTCCATCAGCTCGCGGCTTGTTTTGCGAAAGACCCGCTCATCGACGAG
TACGATTTTGTCTTGCTTCCTTCACCATCCGATTTAGCGAAGGGCGCACC
GATAGAAGATACTATGGCTTTTGTGTTGGAGGCACACAAGCTTGGGATTG
CCACTTGGGCACTGAAACCGATATTCAAAGAAGCTTTACATATGATCCGC
CGCATCACCACCGCCTCTTCAAAGGCGAGGGAGCGGGGGGAAACCGGACA
AGACGACGAGAAAGAGGACATGATGGTAGATGAGATGGCAACGCGGGCTT
TATTGCTGATAAATCCTGACACTTATACAGCGTGGAATGTGCGAAAACGA
CTGATTGTGGGGGGCTACCTTAGTGCGGTCGATGAGCTGGCCTTCATTGA
CCTGATCTTCAGCAAATACACTAAGAAAGCCTCTGCCTGGGCCCATCGAC
GATGGTGTGTGTCGCGGCTCTTGGAGCATTTGGCAAAAAACAGCAGGAAA
GTCAGCAAGGTTGGGGAGAAGGATCAGCATCACCAGCAGCAGCAGCAGTG
GTGTTGGAGCCAGCAGCGAGAGAAGGAACTGGAAGTAACGGCAAAGATTG
CCGAGGCGCTTCCCAAGAATTACTATGCCTGGACGCACCGTTGGAGGGTG
GTTAGAGGCAAGGACGTAGGGATGTGTGATGCCCACTGGGAAGAAAAGGG
GTTAACGTTGAAAATAGAAACGTCAGACGAGGAGAAGAAAGAGGAGGCAG
CGTTATGGCAGCAGGAAGTGGAATTTGTGCAGGGATGGACTGGGCGTCAT
GTGGGGGATATGGCAGCCATGAATTACTTGCAGCAGGTTACAAGTGCCTG
CTTTTGTCAAGAGGCATGTGCGAACGGGACGGGGGGCGGGATGAGAGGGG
TACTGAGGTGCGGAGAGGAAGAGGAAATAGGTGTTAAAAAGATGTAAATG
AGAAATTGAAATCACCTGCAGTAGAAATGTGAGAATACTGCATTACTGAA
AGAAAAAATTTAAGGCGAACTCCACG back to topprotein sequence of jgi.p|Nanoce1779_2|631092 >mRNA_5482-protein ID=mRNA_5482-protein|Name=jgi.p|Nanoce1779_2|631092|organism=Nannochloropsis oceanica|type=polypeptide|length=326bp
MASLSSSSSSLVHQLAACFAKDPLIDEYDFVLLPSPSDLAKGAPIEDTMA
FVLEAHKLGIATWALKPIFKEALHMIRRITTASSKARERGETGQDDEKED
MMVDEMATRALLLINPDTYTAWNVRKRLIVGGYLSAVDELAFIDLIFSKY
TKKASAWAHRRWCVSRLLEHLAKNSRKVSKVGEKDQHHQQQQQWCWSQQR
EKELEVTAKIAEALPKNYYAWTHRWRVVRGKDVGMCDAHWEEKGLTLKIE
TSDEEKKEEAALWQQEVEFVQGWTGRHVGDMAAMNYLQQVTSACFCQEAC
ANGTGGGMRGVLRCGEEEEIGVKKM* back to topmRNA from alignment at scaffold_13:519045..521106- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_5482 ID=mRNA_5482|Name=jgi.p|Nanoce1779_2|631092|organism=Nannochloropsis oceanica|type=mRNA|length=2062bp|location=Sequence derived from alignment at scaffold_13:519045..521106- (Nannochloropsis oceanica)
GGGAAGCTGTTGGGGTCTAATCTTACGCCCACTTGTGCTTTTACCCTTCA
GAGACACAGTACGCGCAGCATGGCGTCCTTGTCTTCCTCGTCGTCATCGT
TGGTCCATCAGCTCGCGGCTTGTTTTGCGAAAGACCCGCTCATGTAAGTT
TTTGCGCATCTGCTGCGGGGGACATTACGCCTAGTGTTGATCAGCTTCTT
ATGATGCCTAACTTACCCGTTCGCATTATGCTCCGCACGCAGCGACGAGT
ACGATTTTGTCTTGCTTCCTTCACCATCCGATTTAGCGAAGGGCGCACCG
ATAGAAGATACTATGGCTTTTGTGTTGGAGGCACACAAGCTTGGGATTGC
CACTTGGGCACTGAAACCGATATTCAAAGAAGCTTTACATATGATCCGCC
GCATCACCACCGCCTCTTCAAAGGCGAGGGAGCGGGGGGAAACCGGACAA
GACGACGAGAAAGAGGACATGATGGTAGATGAGATGGCAACGCGGGCTTT
ATTGCTGATAAATCCTGACACTTATACAGCGTGGAATGTGCGAAAACGAC
TGATTGTGGGGGGCTACCTTAGGTAAGGAGTGGAGGATGCGTGGACGAGG
CGCATGCAGATTTTTAAAATAATGGGAGATAATTTATTTTGTTTCCCCCT
GGCCTGTCATACGGTACACATACCCCTTTACGTTTGTCATCACCCCTGCA
TACAATCAGTGCGGTCGATGAGCTGGCCTTCATTGACCTGATCTTCAGCA
AATACACTAAGAAAGCCTCTGCCTGGGCCCATCGACGATGGTGTGTGTCG
CGGCTCTTGGAGCATTTGGCAAAAAACAGCAGGAAAGTCAGCAAGGTTGG
GGAGAAGGATCAGCATCACCAGCAGCAGCAGCAGTGGTGTTGGAGCCAGC
AGCGAGAGAAGGAACTGGAAGTAACGGCAAAGATTGCCGAGGCGCTTCCC
AAGAATTACTATGCCTGGACGCACCGTTGGAGGGTGGTTAGAGGCAAGGA
CGTAGGGATGTGTGATGCCCACTGGGAAGAAAAGGGGTTAACGTTGAAAA
TAGAAACGTCAGACGAGGAGAAGAAAGAGGAGGCAGCGTTATGGCAGCAG
GAAGTGGAATTTGTGCAGGGATGGACTGGGCGTCATGTGGGGGATATGGC
AGCCATGAATTACTTGCAGCAGGTTTTGACTCATGCCATTTCGGTCTCTC
CTTCTCCTCCCTCTTCCTCTTCCTCCTCTTCCTCCTCCTGCTCCTGCTGC
TCCTCCTGCATCTCCTGCTCCTCCTCCTCTATCCCTGCTGTTGCATTCAC
TCCCCTTTCGAAAAGCGAGAGGGAGCAAAACCAGTCATTGGCGAGACTTC
GTTCCATCACTTCTTCCCTAAATTCGCTGCTGGAGTTGAACTTTGCATCC
CTCGACACTTATCCAGGTCACGAAAGCCTGTGGTACCAACGACGGGGCCT
ACTGGAACTATGGATGGCGACAATGAGGCGACGAGAAGTAGCAGGATCCC
TCTCGTCTTCTCCTTTTTCTTCCTCCTCCTCCTCCTCCACTTCAGCTATT
GCCACCGCTGCCGCCGTTCCCCCCTCCTACCATGCTCAGATTACTCTCTA
CAATGCTGAGATGGACCGCGGTAGTCACTACATGCAGGGGGAGAGACCGT
GGGAGGGAGGAGAGGGAGGGAGGGAGGGAGGGCTGTTGTGGGATGCAGCA
GCGAAACGGAAGCAGAAGCTTAGTGCGTGGGCACATAGGTGCTGGATGGT
ACTTCGTTGGAGGAAAGGAGAAGGGTGGGACGGGAAAGGGGCAAAGGAGA
ATGAGAGGGCAGCATTATGGGAGGAGTTGATGGCATTGGAGGCGAGTGAC
TCTCTTTTGTTTGTCCCTCCAGGTTACAAGTGCCTGCTTTTGTCAAGAGG
CATGTGCGAACGGGACGGGGGGCGGGATGAGAGGGGTACTGAGGTGCGGA
GAGGAAGAGGAAATAGGTGTTAAAAAGATGTAAATGAGAAATTGAAATCA
CCTGCAGTAGAAATGTGAGAATACTGCATTACTGAAAGAAAAAATTTAAG
GCGAACTCCACG back to topCoding sequence (CDS) from alignment at scaffold_13:519045..521106- >mRNA_5482 ID=mRNA_5482|Name=jgi.p|Nanoce1779_2|631092|organism=Nannochloropsis oceanica|type=CDS|length=3912bp|location=Sequence derived from alignment at scaffold_13:519045..521106- (Nannochloropsis oceanica)
GTTACAAGTGCCTGCTTTTGTCAAGAGGCATGTGCGAACGGGACGGGGGG
CGGGATGAGAGGGGTACTGAGGTGCGGAGAGGAAGAGGAAATAGGTGTTA
AAAAGATGTAATGCGGTCGATGAGCTGGCCTTCATTGACCTGATCTTCAG
CAAATACACTAAGAAAGCCTCTGCCTGGGCCCATCGACGATGGTGTGTGT
CGCGGCTCTTGGAGCATTTGGCAAAAAACAGCAGGAAAGTCAGCAAGGTT
GGGGAGAAGGATCAGCATCACCAGCAGCAGCAGCAGTGGTGTTGGAGCCA
GCAGCGAGAGAAGGAACTGGAAGTAACGGCAAAGATTGCCGAGGCGCTTC
CCAAGAATTACTATGCCTGGACGCACCGTTGGAGGGTGGTTAGAGGCAAG
GACGTAGGGATGTGTGATGCCCACTGGGAAGAAAAGGGGTTAACGTTGAA
AATAGAAACGTCAGACGAGGAGAAGAAAGAGGAGGCAGCGTTATGGCAGC
AGGAAGTGGAATTTGTGCAGGGATGGACTGGGCGTCATGTGGGGGATATG
GCAGCCATGAATTACTTGCAGCAGCGACGAGTACGATTTTGTCTTGCTTC
CTTCACCATCCGATTTAGCGAAGGGCGCACCGATAGAAGATACTATGGCT
TTTGTGTTGGAGGCACACAAGCTTGGGATTGCCACTTGGGCACTGAAACC
GATATTCAAAGAAGCTTTACATATGATCCGCCGCATCACCACCGCCTCTT
CAAAGGCGAGGGAGCGGGGGGAAACCGGACAAGACGACGAGAAAGAGGAC
ATGATGGTAGATGAGATGGCAACGCGGGCTTTATTGCTGATAAATCCTGA
CACTTATACAGCGTGGAATGTGCGAAAACGACTGATTGTGGGGGGCTACC
TTAGATGGCGTCCTTGTCTTCCTCGTCGTCATCGTTGGTCCATCAGCTCG
CGGCTTGTTTTGCGAAAGACCCGCTCATGTTACAAGTGCCTGCTTTTGTC
AAGAGGCATGTGCGAACGGGACGGGGGGCGGGATGAGAGGGGTACTGAGG
TGCGGAGAGGAAGAGGAAATAGGTGTTAAAAAGATGTAATGCGGTCGATG
AGCTGGCCTTCATTGACCTGATCTTCAGCAAATACACTAAGAAAGCCTCT
GCCTGGGCCCATCGACGATGGTGTGTGTCGCGGCTCTTGGAGCATTTGGC
AAAAAACAGCAGGAAAGTCAGCAAGGTTGGGGAGAAGGATCAGCATCACC
AGCAGCAGCAGCAGTGGTGTTGGAGCCAGCAGCGAGAGAAGGAACTGGAA
GTAACGGCAAAGATTGCCGAGGCGCTTCCCAAGAATTACTATGCCTGGAC
GCACCGTTGGAGGGTGGTTAGAGGCAAGGACGTAGGGATGTGTGATGCCC
ACTGGGAAGAAAAGGGGTTAACGTTGAAAATAGAAACGTCAGACGAGGAG
AAGAAAGAGGAGGCAGCGTTATGGCAGCAGGAAGTGGAATTTGTGCAGGG
ATGGACTGGGCGTCATGTGGGGGATATGGCAGCCATGAATTACTTGCAGC
AGCGACGAGTACGATTTTGTCTTGCTTCCTTCACCATCCGATTTAGCGAA
GGGCGCACCGATAGAAGATACTATGGCTTTTGTGTTGGAGGCACACAAGC
TTGGGATTGCCACTTGGGCACTGAAACCGATATTCAAAGAAGCTTTACAT
ATGATCCGCCGCATCACCACCGCCTCTTCAAAGGCGAGGGAGCGGGGGGA
AACCGGACAAGACGACGAGAAAGAGGACATGATGGTAGATGAGATGGCAA
CGCGGGCTTTATTGCTGATAAATCCTGACACTTATACAGCGTGGAATGTG
CGAAAACGACTGATTGTGGGGGGCTACCTTAGATGGCGTCCTTGTCTTCC
TCGTCGTCATCGTTGGTCCATCAGCTCGCGGCTTGTTTTGCGAAAGACCC
GCTCATGTTACAAGTGCCTGCTTTTGTCAAGAGGCATGTGCGAACGGGAC
GGGGGGCGGGATGAGAGGGGTACTGAGGTGCGGAGAGGAAGAGGAAATAG
GTGTTAAAAAGATGTAATGCGGTCGATGAGCTGGCCTTCATTGACCTGAT
CTTCAGCAAATACACTAAGAAAGCCTCTGCCTGGGCCCATCGACGATGGT
GTGTGTCGCGGCTCTTGGAGCATTTGGCAAAAAACAGCAGGAAAGTCAGC
AAGGTTGGGGAGAAGGATCAGCATCACCAGCAGCAGCAGCAGTGGTGTTG
GAGCCAGCAGCGAGAGAAGGAACTGGAAGTAACGGCAAAGATTGCCGAGG
CGCTTCCCAAGAATTACTATGCCTGGACGCACCGTTGGAGGGTGGTTAGA
GGCAAGGACGTAGGGATGTGTGATGCCCACTGGGAAGAAAAGGGGTTAAC
GTTGAAAATAGAAACGTCAGACGAGGAGAAGAAAGAGGAGGCAGCGTTAT
GGCAGCAGGAAGTGGAATTTGTGCAGGGATGGACTGGGCGTCATGTGGGG
GATATGGCAGCCATGAATTACTTGCAGCAGCGACGAGTACGATTTTGTCT
TGCTTCCTTCACCATCCGATTTAGCGAAGGGCGCACCGATAGAAGATACT
ATGGCTTTTGTGTTGGAGGCACACAAGCTTGGGATTGCCACTTGGGCACT
GAAACCGATATTCAAAGAAGCTTTACATATGATCCGCCGCATCACCACCG
CCTCTTCAAAGGCGAGGGAGCGGGGGGAAACCGGACAAGACGACGAGAAA
GAGGACATGATGGTAGATGAGATGGCAACGCGGGCTTTATTGCTGATAAA
TCCTGACACTTATACAGCGTGGAATGTGCGAAAACGACTGATTGTGGGGG
GCTACCTTAGATGGCGTCCTTGTCTTCCTCGTCGTCATCGTTGGTCCATC
AGCTCGCGGCTTGTTTTGCGAAAGACCCGCTCATGTTACAAGTGCCTGCT
TTTGTCAAGAGGCATGTGCGAACGGGACGGGGGGCGGGATGAGAGGGGTA
CTGAGGTGCGGAGAGGAAGAGGAAATAGGTGTTAAAAAGATGTAATGCGG
TCGATGAGCTGGCCTTCATTGACCTGATCTTCAGCAAATACACTAAGAAA
GCCTCTGCCTGGGCCCATCGACGATGGTGTGTGTCGCGGCTCTTGGAGCA
TTTGGCAAAAAACAGCAGGAAAGTCAGCAAGGTTGGGGAGAAGGATCAGC
ATCACCAGCAGCAGCAGCAGTGGTGTTGGAGCCAGCAGCGAGAGAAGGAA
CTGGAAGTAACGGCAAAGATTGCCGAGGCGCTTCCCAAGAATTACTATGC
CTGGACGCACCGTTGGAGGGTGGTTAGAGGCAAGGACGTAGGGATGTGTG
ATGCCCACTGGGAAGAAAAGGGGTTAACGTTGAAAATAGAAACGTCAGAC
GAGGAGAAGAAAGAGGAGGCAGCGTTATGGCAGCAGGAAGTGGAATTTGT
GCAGGGATGGACTGGGCGTCATGTGGGGGATATGGCAGCCATGAATTACT
TGCAGCAGCGACGAGTACGATTTTGTCTTGCTTCCTTCACCATCCGATTT
AGCGAAGGGCGCACCGATAGAAGATACTATGGCTTTTGTGTTGGAGGCAC
ACAAGCTTGGGATTGCCACTTGGGCACTGAAACCGATATTCAAAGAAGCT
TTACATATGATCCGCCGCATCACCACCGCCTCTTCAAAGGCGAGGGAGCG
GGGGGAAACCGGACAAGACGACGAGAAAGAGGACATGATGGTAGATGAGA
TGGCAACGCGGGCTTTATTGCTGATAAATCCTGACACTTATACAGCGTGG
AATGTGCGAAAACGACTGATTGTGGGGGGCTACCTTAGATGGCGTCCTTG
TCTTCCTCGTCGTCATCGTTGGTCCATCAGCTCGCGGCTTGTTTTGCGAA
AGACCCGCTCAT back to top
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