jgi.p|Nanoce1779_2|592644, mRNA_5477 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|592644
Unique Name	mRNA_5477
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	4819
Alignment location	scaffold_13:502045..507534 +

Link to JBrowse

Properties


Property Name	Value
TranscriptId	592730
Track	FilteredModels2
ProteinId	592644

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_13	supercontig	scaffold_13:502045..507534 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

Homology

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|592644	gene_5477	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|592644	mRNA_5477-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS_5477	CDS_5477	Nannochloropsis oceanica (N. oceanica CCMP1779)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at scaffold_13:502045..507534+
coding sequence from alignment at scaffold_13:502045..507534+

mRNA sequence

>mRNA_5477 ID=mRNA_5477|Name=jgi.p|Nanoce1779_2|592644|organism=Nannochloropsis oceanica|type=mRNA|length=4819bp
CGGGGCGACTCGTGGGGAATCCTCGGCATGGACCAATGCATAGTTATCTT
TCACTGCAATGCATTTTCCTCTGGTTAAACTTCCCTTTAGCTCAGCTTGC
GATCACCAAGTGTCCCCCCTCACCTTTTCCTCTCTGTCTCACTTCACAGT
GGTCCAAATTTCAATTTTAGAAAGAAATTTACGCTTCACCCCCTTGGATG
AGCGGAGGAAGGTTCCGCTTCCTCTCGATTTGATCTCAACTCGGTCGTTG
ACTCGAACACTCCACCACTGTTAATGTCACCATTGGCCTCTCAGAAAAAT
AATATCGTATTTAAAGTTATATGTTGGCACTAATATCTGCACGCGCGTAT
AGTTTAGAAGTGCTTGGGATGATAAGTGATGCTTTTTGGGGCCCTGACCT
CAGAGTTCGCCGCTGAGAGCCGAGAGAGTTTCGTGGCCCATGATTGTACT
TTCTTTCCATATGGTGATTCGCATGGGCATCAGCTTTCTTCTCATGTGAA
GCTATCCTGAAACTTGGCACCTGGCTTTTCGTGCGTGAGGCCATGGCAGC
ATTTACTCCCCTTAGTCATCTCCCCTTTACAGCCTTTTGACCATATTCGC
TTAACTGCCCACCTGACAATCACAGTTACTAAAATCTACAACGCTACTCG
GCGTCATTACATCGCCGCTGCGGTGTTGTATTTCTACTGGGATCTATCTT
GTCTCTACCTCTCCCTAACACTGCCTCTATTTCTGGCCCTCTTGACCTCT
TCTCCCTATTTACTCCTCCTATCACACACACGTGTTGACTCACCCACCCA
GCCAACGCGACAGACCCGACCCGATATCTAAAACGTGCTAACCTTGAAGC
CCCGGCGCAATTGTCGGCGGAGATGCATTGGATTTTTAACTGCATCTTTC
CGCTCCTTTGGCGGCGCGGCTGCCTGCTCTCTCTCCTTCTCCTTCTCCTC
AGACAGCGCCATCAGCTTGGTGCTGGGGTGGACATCCCTCTTGGGCAATA
CAGGCATGGCCTCCTCTTGCTTCATATTAGGTGTTGCAAGACTTGTGGGG
TTCTTGGACAGCGTTCTAGGATAAGAGGTGATGGGGAGGGACGCCGTCAT
GTTCGTGGCTGTCTTGGTCTCAACCACGGGCGGCGCCACCACCTTTTCCT
CCCTGGATGCAGCTGCGTCTTCCTTCTCGTTGCGGAACTTAGGCAGAAAA
GGAAGAATTGCTGTGTCTTCCGATTTTGGGGGCCTCTGTTTTGTGGGCGC
TGGCTCATCATCAGTAGGGGCCTTCCAGAGTTTTTCCGAAGAATAGGTGA
GAGAGGGGTTGAAATAGGAAAACAAGGACAAGTCGGGAGGAGCAGAGAAG
GTAAGAGGAGCAAGAGGTACAGAAGGATTGAAAGGAGGAGATACAATAAA
AGCAAAAGCAGAAGAAGGCGAAGAGGGTCTATACAGAGATGATCGTGTTG
ACAAGGACGATGAGCCAATAGGCGCCAGCAAGAAATGGCTTGTCTTGATC
GTCGTGGGGGCTGTCCCTGCCGTCGCTGCTACCGGAGCGGCTTCACGTAA
CCATCACCCATCCCAGTAGCTGTAGTAGCGTTCTTCTTCAGTAGATCGTC
GTTCCCACCCATCTTGGTTGCCTGGACTGGTGCCTCGAGCGCGGTCCACT
CACGTGCGGCGCTTGTGCGATACATGATAATCTCGTCATGAAGGGCTTAG
ATCTGCTCGTCCTCGTCCTCACCACTACTGTCCTTCAGCGCTTTACTTGC
GACCTCACACATACTGTACGTTTTGACTGCGTCATCGCGAAAAGAGCTGA
ATTCGCCGTTCAAAGCCTTGACCTGTGCATGGAGCTCAGTCTTGGTCTGC
GTCTCGATGGCGTGCCCATTGGTCTTCGATGTCCGCTCCTTGGATAATAC
TGTGATTTCCTCCCGGTATACAAGACGAGAAAACTGGCGATGAATCGGAC
CCTCCAACAGATGCTGGGCCTTTTTTAAGTCCTTGGGGCAATCAGGAAGG
GGCGAAGCGTTCCCAGCTGCGTCTGCCGCCATATCCTCTGAGTCGTCATT
CTCGCATATCTTCACGGCATACACAGCGATCAACGTGGCTAACATCACAT
TCATCGCATACACACAATTTCGTAACAACTTGCTCACACGGGCTACGTCT
TTTTCGAGTGACTGAGAGCGGTCAATACGCCCCAGGCAAGCAGCAAGGAG
GAGTACGCAGATGGGGAGCAAGAGCGAGTTGAGCACGGAGAAGATCATAA
CGCAGCCACAAACAATCCACATTTCAAAATGCTTGAAATTTGTCGTGATG
GCATCACCTGTTATTGTGCGTGGGTGTGGAAGGGGTGGTGAGGACGCGCG
TGCTTGGCCTGCTGCATGGTGGTAACGCCTAATTTACGCAGAAGGTGCGG
GGCAGATTCGGGCAAATAGTGATAGGGTTTTATAGTGATAGGGATTTATC
GTGAGAATGCATGCAATTTGATGTCCCAACGACGCGGGCTCAACAGGGTG
GCTTACTGTGTGGAGTCGATGCCGCGAAGGGCAGCGAGGGGAAAGGCCGC
CTATCGGCATCCAAAAGTCACTGACTAGGATTGTGCCCACAGATGGCATG
CGCTAGCGGTGCTGATGCCAAGTGACCATTCACATTTAACTAGTGTTGCT
TATGTGGGTTTGGCGGGGATGGTTGTCGTAAAGCCCAGGGCAAATGGAGG
GAGGGCCATGTTTTGGGGGGAGGTGCAGCTCGAAAGGTTACGGGCAAACG
AGTTGGCGAAACCTCTGGAGACGAGGCAACTGACATATCCCCACCACACG
CCACATAGACAGTGTGCTCAAGCAAGGAGCTGTCTTGTCCTTGTCTTGAA
CGACGCGGAAATGTGCTCTCAAAGTGAGGCCACCAGTGGCGCGGATGCAG
CACATGACCAACCTCCTGCCACGGTACCCAAGAAAAAATACTCAGGGCTC
ATCAAGCGCCATCCGCAGGACTTCGTAGTTCGTGAAATCGACTTGACAGG
GCGCGTAGCGGACATCGCAAGCCTTGCCGCTATGCCAGCGACATTGGGGC
CCATGACAGCAGGAGCAGAAGCAGCCGCCCAAGCCCCTGATGCTTCGACA
CCACCACCACCACCACCACCAGCAGCATCAGCTTCGTCGTCCTTGTTGTC
TGTCCCCCCATGCCACGACAAGCAGGCTCTTATATCGGTCCTTGGCCAAA
GGATCATGGAAACACTCGAAATATTTCATCGACAGCATGTAGTACAAGTG
CTAGAAGGGGGAAGAGATGGACAAGGACCTCATCAAATCCGCATCCCCCT
CCCCTCCGACCGCATCGCCCGCGGCGTCTTGCACCGTTCCCTCAAGCACG
CGTTCCCAGGCATTGCCACGCAACACGACGCCTCGGACCATTCCCTCCTC
GTTGTCACGACCGACGCGCGCAACTTGAATGTTGGCCGCGAGCTACTCGC
GCAAAAAATCACTCTCGCACAAGTCCTTGCCCTCTTTTCCTATGTGGGCC
GGGGACGTGGAGACCCCATCACTGTAGCCGCAGCAAGACAGGGAAGAGGA
TTACTTTTAAGTGAAATGATGGTCGATAAATCGGCACGTACAAAGGTGTA
TCGTGTCGTGAGTGATGCTTTCCCCGGACTGCAATGTTGGGACAAGTACG
GAGTACGTGTGCATGTGGCATGGAAGCCTTCGTCGATCCATCACCAGGAG
AAGAGAGAAAAAAGGAAAAGGAAACGTCAAATCCAAGAGAATGAGGGAGA
AGGAGGAGAAGGAGGAGGAGGAGGTGGTAAATCGTCTTCCCTCCTCCTTC
GTCTTGTCTTGCGCAAAGAAAATCTCGAGCACCTTGAGGCCCTTCAACGA
TTATCCTGCTCGTTGGGGGGTTTGTCCTTCCCTTCCTCCCTGGCTGTGGC
GGGAGTGAAAGACAAGAGGGCAATCACGTATCAATATGTCACAGTGAAGA
TATCAAGGAAAGTGATGGCCTTGGAACGAGTTAGGCAAGGGCTTTTGTCC
TTGAGCATTTCTCCTACTTCTACTACTCTTACCCCTCCTCCTCTTCCTAC
TCCTAATCTTCCTGCTGTTACTCCTCTTACTCTTACTCCTACTCCTGCGA
CTGCTGCAGGTGGTGGTGGGAATGCTGTTGCTTCTGCTGGTAAGGAGAGT
GGGAACGGCAACAGCAGCAGCAATACAGGAGGAATACATGTAGGCCATGC
GGAAGAATGGCAACGGCCGTTGCGGCTCGGGGAGAGTCGTGGAAACTACT
TCAACGTGATGGTGAGGGATGTGTGTTGTGTGTACGAGGACGGGGGGGGG
GAGAAGGAAAACGTGGATCTTGACGGTCCTACTGGTAAAGAGGAGAAGAA
AGATATGGAGGAAAAGAAGGAGGGGAAGGAGGAGGAAAAGGAGACGGATA
AAGACGAGGATAGTACAGCAGCAGTGACAACCGCAAAAAACACGATCCGA
TCCAACATGCTAAATCCCTCTTTTGGGACGGACAAACACCCATTCACACC
ATCCTCAAGCTCCTCCCTCCCTCCCTTGCGCGCGAACGGCTGTTCCTCCG
AGGCCTGCACAGGCATGGACGAGATCAATCTGCCCGGGCTGTGGCGTGCT
TACCCTATGGAGTCAGAACTCAGTGGCTTAGTGCTTATCAATCATGGTTG
TGGAATAGAATGGCAAAGTGGAGGGTGGAGAGGTTTGGATCGAAGGCTGT
AGAAGGGGATTTGGTGCTCGTAATATCGGAAAAGGAAGGAGGGAAGGAGG
GAGGGACAGAAGGAGGAATTGAGAAAGAGCCGGGGCAAGAGAAGCGTCCA
GTGGTGCGGCGTTTGACGA

protein sequence of jgi.p|Nanoce1779_2|592644

>mRNA_5477-protein ID=mRNA_5477-protein|Name=jgi.p|Nanoce1779_2|592644|organism=Nannochloropsis oceanica|type=polypeptide|length=696bp
MPSDHSHLTSVAYVGLAGMVVVKPRANGGRAMFWGEVQLERLRANELAKP
LETRQLTYPHHTPHRQCAQARSCLVLVLNDAEMCSQSEATSGADAAHDQP
PATVPKKKYSGLIKRHPQDFVVREIDLTGRVADIASLAAMPATLGPMTAG
AEAAAQAPDASTPPPPPPPAASASSSLLSVPPCHDKQALISVLGQRIMET
LEIFHRQHVVQVLEGGRDGQGPHQIRIPLPSDRIARGVLHRSLKHAFPGI
ATQHDASDHSLLVVTTDARNLNVGRELLAQKITLAQVLALFSYVGRGRGD
PITVAAARQGRGLLLSEMMVDKSARTKVYRVVSDAFPGLQCWDKYGVRVH
VAWKPSSIHHQEKREKRKRKRQIQENEGEGGEGGGGGGKSSSLLLRLVLR
KENLEHLEALQRLSCSLGGLSFPSSLAVAGVKDKRAITYQYVTVKISRKV
MALERVRQGLLSLSISPTSTTLTPPPLPTPNLPAVTPLTLTPTPATAAGG
GGNAVASAGKESGNGNSSSNTGGIHVGHAEEWQRPLRLGESRGNYFNVMV
RDVCCVYEDGGGEKENVDLDGPTGKEEKKDMEEKKEGKEEEKETDKDEDS
TAAVTTAKNTIRSNMLNPSFGTDKHPFTPSSSSSLPPLRANGCSSEACTG
MDEINLPGLWRAYPMESELSGLVLINHGCGIEWQSGGWRGLDRRL*

mRNA from alignment at scaffold_13:502045..507534+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_5477 ID=mRNA_5477|Name=jgi.p|Nanoce1779_2|592644|organism=Nannochloropsis oceanica|type=mRNA|length=5490bp|location=Sequence derived from alignment at scaffold_13:502045..507534+ (Nannochloropsis oceanica)
CGGGGCGACTCGTGGGGAATCCTCGGCATGGACCAATGCATAGTTATCTT
TCACTGCAATGCATTTTCCTCTGGTTAAACTTCCCTTTAGCTCAGCTTGC
GATCACCAAGTGTCCCCCCTCACCTTTTCCTCTCTGTCTCACTTCACAGT
GGTCCAAATTTCAATTTTAGAAAGAAATTTACGCTTCACCCCCTTGGATG
AGCGGAGGAAGGTTCCGCTTCCTCTCGATTTGATCTCAACTCGGTCGTTG
ACTCGAACACTCCACCACTGTTAATGTCACCATTGGCCTCTCAGAAAAAT
AATATCGTATTTAAAGTTATATGTTGGCACTAATATCTGCACGCGCGTAT
AGTTTAGAAGTGCTTGGGATGATAAGTGATGCTTTTTGGGGCCCTGACCT
CAGAGTTCGCCGCTGAGAGCCGAGAGAGTTTCGTGGCCCATGATTGTACT
TTCTTTCCATATGGTGATTCGCATGGGCATCAGCTTTCTTCTCATGTGAA
GCTATCCTGAAACTTGGCACCTGGCTTTTCGTGCGTGAGGCCATGGCAGC
ATTTACTCCCCTTAGTCATCTCCCCTTTACAGCCTTTTGACCATATTCGC
TTAACTGCCCACCTGACAATCACAGTTACTAAAATCTACAACGCTACTCG
GCGTCATTACATCGCCGCTGCGGTGTTGTATTTCTACTGGGATCTATCTT
GTCTCTACCTCTCCCTAACACTGCCTCTATTTCTGGCCCTCTTGACCTCT
TCTCCCTATTTACTCCTCCTATCACACACACGTGTTGACTCACCCACCCA
GCCAACGCGACAGACCCGACCCGATATCTAAAACGTGCTAACCTTGAAGC
CCCGGCGCAATTGTCGGCGGAGATGCATTGGATTTTTAACTGCATCTTTC
CGCTCCTTTGGCGGCGCGGCTGCCTGCTCTCTCTCCTTCTCCTTCTCCTC
AGACAGCGCCATCAGCTTGGTGCTGGGGTGGACATCCCTCTTGGGCAATA
CAGGCATGGCCTCCTCTTGCTTCATATTAGGTGTTGCAAGACTTGTGGGG
TTCTTGGACAGCGTTCTAGGATAAGAGGTGATGGGGAGGGACGCCGTCAT
GTTCGTGGCTGTCTTGGTCTCAACCACGGGCGGCGCCACCACCTTTTCCT
CCCTGGATGCAGCTGCGTCTTCCTTCTCGTTGCGGAACTTAGGCAGAAAA
GGAAGAATTGCTGTGTCTTCCGATTTTGGGGGCCTCTGTTTTGTGGGCGC
TGGCTCATCATCAGTAGGGGCCTTCCAGAGTTTTTCCGAAGAATAGGTGA
GAGAGGGGTTGAAATAGGAAAACAAGGACAAGTCGGGAGGAGCAGAGAAG
GTAAGAGGAGCAAGAGGTACAGAAGGATTGAAAGGAGGAGATACAATAAA
AGCAAAAGCAGAAGAAGGCGAAGAGGGTCTATACAGAGATGATCGTGTTG
ACAAGGACGATGAGCCAATAGGCGCCAGCAAGAAATGGCTTGTCTTGATC
GTCGTGGGGGCTGTCCCTGCCGTCGCTGCTACCGGAGCGGCTGACGCGTC
GAAAGACAAGGCGAGAGAGGAGAGAGAGCAGAATGAAGGGAGGAGAGACG
GGCACTGAGTTCTTGTCGTCGGCGAAGTCACGGCAGTCATGCCGTCTGCC
TTGGGCTCCTGCCCGGGCGTTTTCTTCCCTCCCTCCTTCCTCACCTTCAC
GTAACCATCACCCATCCCAGTAGCTGTAGTAGCGTTCTTCTTCAGTAGAT
CGTCGTTCCCACCCATCTTGGTTGCCTGGACTGGTGCCTCGAGCGCGGTC
CACTCACGTGCGGCGCTTGTGCGATACATGATAATCTCGTCATGAAGGGC
TTAGATCTGCTCGTCCTCGTCCTCACCACTACTGTCCTTCAGCGCTTTAC
TTGCGACCTCACACATACTGTACGTTTTGACTGCGTCATCGCGAAAAGAG
CTGAATTCGCCGTTCAAAGCCTTGACCTGTGCATGGAGCTCAGTCTTGGT
CTGCGTCTCGATGGCGTGCCCATTGGTCTTCGATGTCCGCTCCTTGGATA
ATACTGTGATTTCCTCCCGGTATACAAGACGAGAAAACTGGCGATGAATC
GGACCCTCCAACAGATGCTGGGCCTTTTTTAAGTCCTTGGGGCAATCAGG
AAGGGGCGAAGCGTTCCCAGCTGCGTCTGCCGCCATATCCTCTGAGTCGT
CATTCTCGCATATCTTCACGGCATACACAGCGATCAACGTGGCTAACATC
ACATTCATCGCATACACACAATTTCGTAACAACTTGCTCACACGGGCTAC
GTCTTTTTCGAGTGACTGAGAGCGGTCAATACGCCCCAGGCAAGCAGCAA
GGAGGAGTACGCAGATGGGGAGCAAGAGCGAGTTGAGCACGGAGAAGATC
ATAACGCAGCCACAAACAATCCACATTTCAAAATGCTTGAAATTTGTCGT
GATGGCATCACCTGTTATTGTGCGTGGGTGTGGAAGGGGTGGTGAGGACG
CGCGTGCTTGGCCTGCTGCATGGTGGTAACGCCTAATTTACGCAGAAGGT
GCGGGGCAGATTCGGGCAAATAGTGATAGGGTTTTATAGTGATAGGGATT
TATCGTGAGAATGCATGCAATTTGATGTCCCAACGACGCGGGCTCAACAG
GGTGGCTTACTGTGTGGAGTCGATGCCGCGAAGGGCAGCGAGGGGAAAGG
CCGCCTATCGGCATCCAAAAGTCACTGACTAGGATTGTGCCCACAGATGG
CATGCGCTAGCGGTGCTGATGCCAAGTGACCATTCACATTTAACTAGTGT
TGCTTATGTGGGTTTGGCGGGGATGGTTGTCGTAAAGCCCAGGGCAAATG
GAGGGAGGGCCATGTTTTGGGGGGAGGTGCAGCTCGAAAGGTTACGGGCA
AACGAGTTGGCGAAACCTCTGGAGACGAGGCAACTGACATATCCCCACCA
CACGCCACATAGACAGTGTGCTCAAGCAAGGAGCTGTCTTGTCCTTGTCT
TGAACGACGCGGAAATGTGCTCTCAAAGTGAGGCCACCAGTGGCGCGGAT
GCAGCACATGACCAACCTCCTGCCACGGTACCCAAGAAAAAATACTCAGG
GCTCATCAAGCGCCATCCGCAGGACTTCGTAGTTCGTGAAATCGACTTGA
CAGGGCGCGTAGCGGACATCGCAAGCCTTGCCGCTATGCCAGCGACATTG
GGGCCCATGACAGCAGGAGCAGAAGCAGCCGCCCAAGCCCCTGATGCTTC
GACACCACCACCACCACCACCACCAGCAGCATCAGCTTCGTCGTCCTTGT
TGTCTGTCCCCCCATGCCACGACAAGCAGGCTCTTATATCGGTCCTTGGC
CAAAGGATCATGGAAACACTCGAAATATTTCATCGACAGCATGTAGTACA
AGTGCTAGAAGGGGGAAGAGATGGACAAGGACCTCATCAAATCCGCATCC
CCCTCCCCTCCGACCGCATCGCCCGCGGCGTCTTGCACCGTTCCCTCAAG
CACGCGTTCCCAGGCATTGCCACGCAACACGACGCCTCGGACCATTCCCT
CCTCGTTGTCACGACCGACGCGCGCAACTTGAATGTTGGCCGCGAGCTAC
TCGCGCAAAAAATCACTCTCGCACAAGTCCTTGCCCTCTTTTCCTATGTG
GGCCGGGGACGTGGAGACCCCATCACTGTAGCCGCAGCAAGACAGGGAAG
AGGATTACTTTTAAGTGAAATGATGGTCGATAAATCGGCACGTACAAAGG
TGTATCGTGTCGTGAGTGATGCTTTCCCCGGACTGCAATGTTGGGACAAG
TACGGAGTACGTGTGCATGTGGCATGGAAGCCTTCGTCGATCCATCACCA
GGAGAAGAGAGAAAAAAGGAAAAGGAAACGTCAAATCCAAGAGAATGAGG
GAGAAGGAGGAGAAGGAGGAGGAGGAGGTGGTAAATCGTCTTCCCTCCTC
CTTCGTCTTGTCTTGCGCAAAGAAAATCTCGAGCACCTTGAGGCCCTTCA
ACGATTATCCTGCTCGTTGGGGGGTTTGTCCTTCCCTTCCTCCCTGGCTG
TGGCGGGAGTGAAAGACAAGAGGGCAATCACGTATCAATATGTCACAGTG
AAGATATCAAGGAAAGTGATGGCCTTGGAACGAGTTAGGCAAGGGCTTTT
GTCCTTGAGCATTTCTCCTACTTCTACTACTCTTACCCCTCCTCCTCTTC
CTACTCCTAATCTTCCTGCTGTTACTCCTCTTACTCTTACTCCTACTCCT
GCGACTGCTGCAGGTGGTGGTGGGAATGCTGTTGCTTCTGCTGGTAAGGA
GAGTGGGAACGGCAACAGCAGCAGCAATACAGGAGGAATACATGTAGGCC
ATGCGGAAGAATGGCAACGGCCGTTGCGGCTCGGGGAGAGTCGTGGAAAC
TACTTCAACGTGATGGTGAGGGATGTGTGTTGTGTGTACGAGGACGGGGG
GGGGGAGAAGGAAAACGTGGATCTTGACGGTCCTACTGGTAAAGAGGAGA
AGAAAGATATGGAGGAAAAGAAGGAGGGGAAGGAGGAGGAAAAGGAGACG
GATAAAGACGAGGATAGTACAGGTGATGTTGTTGTCGTTGCTGCTGCTGC
TGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTG
CTCGGAAAGATGAAGCGAGTACTCTCAATGTCATGCAAGAGGACTTGGAA
GCACGGCTATGTGAGCTTAGACGTGCAGGATTCGTTAATTATTTTGGGGT
GCAACGCGTGGGGATAGGTAGATCAAAGAAAGGAGGGAAAGCAACAGCAT
CTTCAGCATCAGCAGCGGCACGAGGAGGGACAGTAGGGCAGCCTTGGGAG
CTCGGACGGGCATTATTGAAGCAGGATTTTGAGGCGTTTAAACGGCTGTT
TCTCGGTGTCCGTCAGGAGGAAGAGAAGAAGAGGGAGAACGACGACGAAA
AGGGAGTCGCGACGAAGAGTATGATTGAGGGTAACAGAGCCTCAGGCAGC
ATCAGTAACAGTAGAGGTAGTTGTGGTGGTAGCAGGACTGGTGGTGATGG
CAGCAGGAGCAGCAGGAGCAGGAGCAACAGGAGCAGCAGCAGCAGTGACA
ACCGCAAAAAACACGATCCGATCCAACATGCTAAATCCCTCTTTTGGGAC
GGACAAACACCCATTCACACCATCCTCAAGCTCCTCCCTCCCTCCCTTGC
GCGCGAACGGCTGTTCCTCCGAGGCCTGCACAGGCATGGACGAGATCAAT
CTGCCCGGGCTGTGGCGTGCTTACCCTATGGAGTCAGAACTCAGTGGCTT
AGTGCTTATCAATCATGGTTGTGGAATAGAATGGCAAAGTGGAGGGTGGA
GAGGTTTGGATCGAAGGCTGTAGAAGGGGATTTGGTGCTCGTAATATCGG
AAAAGGAAGGAGGGAAGGAGGGAGGGACAGAAGGAGGAATTGAGAAAGAG
CCGGGGCAAGAGAAGCGTCCAGTGGTGCGGCGTTTGACGA

Coding sequence (CDS) from alignment at scaffold_13:502045..507534+

>mRNA_5477 ID=mRNA_5477|Name=jgi.p|Nanoce1779_2|592644|organism=Nannochloropsis oceanica|type=CDS|length=4176bp|location=Sequence derived from alignment at scaffold_13:502045..507534+ (Nannochloropsis oceanica)
ATGCCAAGTGACCATTCACATTTAACTAGTGTTGCTTATGTGGGTTTGGC
GGGGATGGTTGTCGTAAAGCCCAGGGCAAATGGAGGGAGGGCCATGTTTT
GGGGGGAGGTGCAGCTCGAAAGGTTACGGGCAAACGAGTTGGCGAAACCT
CTGGAGACGAGGCAACTGACATATCCCCACCACACGCCACATAGACAGTG
TGCTCAAGCAAGGAGCTGTCTTGTCCTTGTCTTGAACGACGCGGAAATGT
GCTCTCAAAGTGAGGCCACCAGTGGCGCGGATGCAGCACATGACCAACCT
CCTGCCACGGTACCCAAGAAAAAATACTCAGGGCTCATCAAGCGCCATCC
GCAGGACTTCGTAGTTCGTGAAATCGACTTGACAGGGCGCGTAGCGGACA
TCGCAAGCCTTGCCGCTATGCCAGCGACATTGGGGCCCATGACAGCAGGA
GCAGAAGCAGCCGCCCAAGCCCCTGATGCTTCGACACCACCACCACCACC
ACCACCAGCAGCATCAGCTTCGTCGTCCTTGTTGTCTGTCCCCCCATGCC
ACGACAAGCAGGCTCTTATATCGGTCCTTGGCCAAAGGATCATGGAAACA
CTCGAAATATTTCATCGACAGCATGTAGTACAAGTGCTAGAAGGGGGAAG
AGATGGACAAGGACCTCATCAAATCCGCATCCCCCTCCCCTCCGACCGCA
TCGCCCGCGGCGTCTTGCACCGTTCCCTCAAGCACGCGTTCCCAGGCATT
GCCACGCAACACGACGCCTCGGACCATTCCCTCCTCGTTGTCACGACCGA
CGCGCGCAACTTGAATGTTGGCCGCGAGCTACTCGCGCAAAAAATCACTC
TCGCACAAGTCCTTGCCCTCTTTTCCTATGTGGGCCGGGGACGTGGAGAC
CCCATCACTGTAGCCGCAGCAAGACAGGGAAGAGGATTACTTTTAAGTGA
AATGATGGTCGATAAATCGGCACGTACAAAGGTGTATCGTGTCGTGAGTG
ATGCTTTCCCCGGACTGCAATGTTGGGACAAGTACGGAGTACGTGTGCAT
GTGGCATGGAAGCCTTCGTCGATCCATCACCAGGAGAAGAGAGAAAAAAG
GAAAAGGAAACGTCAAATCCAAGAGAATGAGGGAGAAGGAGGAGAAGGAG
GAGGAGGAGGTGGTAAATCGTCTTCCCTCCTCCTTCGTCTTGTCTTGCGC
AAAGAAAATCTCGAGCACCTTGAGGCCCTTCAACGATTATCCTGCTCGTT
GGGGGGTTTGTCCTTCCCTTCCTCCCTGGCTGTGGCGGGAGTGAAAGACA
AGAGGGCAATCACGTATCAATATGTCACAGTGAAGATATCAAGGAAAGTG
ATGGCCTTGGAACGAGTTAGGCAAGGGCTTTTGTCCTTGAGCATTTCTCC
TACTTCTACTACTCTTACCCCTCCTCCTCTTCCTACTCCTAATCTTCCTG
CTGTTACTCCTCTTACTCTTACTCCTACTCCTGCGACTGCTGCAGGTGGT
GGTGGGAATGCTGTTGCTTCTGCTGGTAAGGAGAGTGGGAACGGCAACAG
CAGCAGCAATACAGGAGGAATACATGTAGGCCATGCGGAAGAATGGCAAC
GGCCGTTGCGGCTCGGGGAGAGTCGTGGAAACTACTTCAACGTGATGGTG
AGGGATGTGTGTTGTGTGTACGAGGACGGGGGGGGGGAGAAGGAAAACGT
GGATCTTGACGGTCCTACTGGTAAAGAGGAGAAGAAAGATATGGAGGAAA
AGAAGGAGGGGAAGGAGGAGGAAAAGGAGACGGATAAAGACGAGGATAGT
ACAGCAGCAGTGACAACCGCAAAAAACACGATCCGATCCAACATGCTAAA
TCCCTCTTTTGGGACGGACAAACACCCATTCACACCATCCTCAAGCTCCT
CCCTCCCTCCCTTGCGCGCGAACGGCTGTTCCTCCGAGGCCTGCACAGGC
ATGGACGAGATCAATCTGCCCGGGCTGTGGCGTGCTTACCCTATGGAGTC
AGAACTCAGTGGCTTAGTGCTTATCAATCATGGTTGTGGAATAGAATGGC
AAAGTGGAGGGTGGAGAGGTTTGGATCGAAGGCTGTAGATGCCAAGTGAC
CATTCACATTTAACTAGTGTTGCTTATGTGGGTTTGGCGGGGATGGTTGT
CGTAAAGCCCAGGGCAAATGGAGGGAGGGCCATGTTTTGGGGGGAGGTGC
AGCTCGAAAGGTTACGGGCAAACGAGTTGGCGAAACCTCTGGAGACGAGG
CAACTGACATATCCCCACCACACGCCACATAGACAGTGTGCTCAAGCAAG
GAGCTGTCTTGTCCTTGTCTTGAACGACGCGGAAATGTGCTCTCAAAGTG
AGGCCACCAGTGGCGCGGATGCAGCACATGACCAACCTCCTGCCACGGTA
CCCAAGAAAAAATACTCAGGGCTCATCAAGCGCCATCCGCAGGACTTCGT
AGTTCGTGAAATCGACTTGACAGGGCGCGTAGCGGACATCGCAAGCCTTG
CCGCTATGCCAGCGACATTGGGGCCCATGACAGCAGGAGCAGAAGCAGCC
GCCCAAGCCCCTGATGCTTCGACACCACCACCACCACCACCACCAGCAGC
ATCAGCTTCGTCGTCCTTGTTGTCTGTCCCCCCATGCCACGACAAGCAGG
CTCTTATATCGGTCCTTGGCCAAAGGATCATGGAAACACTCGAAATATTT
CATCGACAGCATGTAGTACAAGTGCTAGAAGGGGGAAGAGATGGACAAGG
ACCTCATCAAATCCGCATCCCCCTCCCCTCCGACCGCATCGCCCGCGGCG
TCTTGCACCGTTCCCTCAAGCACGCGTTCCCAGGCATTGCCACGCAACAC
GACGCCTCGGACCATTCCCTCCTCGTTGTCACGACCGACGCGCGCAACTT
GAATGTTGGCCGCGAGCTACTCGCGCAAAAAATCACTCTCGCACAAGTCC
TTGCCCTCTTTTCCTATGTGGGCCGGGGACGTGGAGACCCCATCACTGTA
GCCGCAGCAAGACAGGGAAGAGGATTACTTTTAAGTGAAATGATGGTCGA
TAAATCGGCACGTACAAAGGTGTATCGTGTCGTGAGTGATGCTTTCCCCG
GACTGCAATGTTGGGACAAGTACGGAGTACGTGTGCATGTGGCATGGAAG
CCTTCGTCGATCCATCACCAGGAGAAGAGAGAAAAAAGGAAAAGGAAACG
TCAAATCCAAGAGAATGAGGGAGAAGGAGGAGAAGGAGGAGGAGGAGGTG
GTAAATCGTCTTCCCTCCTCCTTCGTCTTGTCTTGCGCAAAGAAAATCTC
GAGCACCTTGAGGCCCTTCAACGATTATCCTGCTCGTTGGGGGGTTTGTC
CTTCCCTTCCTCCCTGGCTGTGGCGGGAGTGAAAGACAAGAGGGCAATCA
CGTATCAATATGTCACAGTGAAGATATCAAGGAAAGTGATGGCCTTGGAA
CGAGTTAGGCAAGGGCTTTTGTCCTTGAGCATTTCTCCTACTTCTACTAC
TCTTACCCCTCCTCCTCTTCCTACTCCTAATCTTCCTGCTGTTACTCCTC
TTACTCTTACTCCTACTCCTGCGACTGCTGCAGGTGGTGGTGGGAATGCT
GTTGCTTCTGCTGGTAAGGAGAGTGGGAACGGCAACAGCAGCAGCAATAC
AGGAGGAATACATGTAGGCCATGCGGAAGAATGGCAACGGCCGTTGCGGC
TCGGGGAGAGTCGTGGAAACTACTTCAACGTGATGGTGAGGGATGTGTGT
TGTGTGTACGAGGACGGGGGGGGGGAGAAGGAAAACGTGGATCTTGACGG
TCCTACTGGTAAAGAGGAGAAGAAAGATATGGAGGAAAAGAAGGAGGGGA
AGGAGGAGGAAAAGGAGACGGATAAAGACGAGGATAGTACAGCAGCAGTG
ACAACCGCAAAAAACACGATCCGATCCAACATGCTAAATCCCTCTTTTGG
GACGGACAAACACCCATTCACACCATCCTCAAGCTCCTCCCTCCCTCCCT
TGCGCGCGAACGGCTGTTCCTCCGAGGCCTGCACAGGCATGGACGAGATC
AATCTGCCCGGGCTGTGGCGTGCTTACCCTATGGAGTCAGAACTCAGTGG
CTTAGTGCTTATCAATCATGGTTGTGGAATAGAATGGCAAAGTGGAGGGT
GGAGAGGTTTGGATCGAAGGCTGTAG

Synonyms

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