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Properties
| Property Name | Value |
|---|
| TranscriptId | 244919 |
| Track | FilteredModels2 |
| ProteinId | 244833 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_3 | supercontig | scaffold_3:1322231..1323662 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_547 ID=mRNA_547|Name=jgi.p|Nanoce1779_2|244833|organism=Nannochloropsis oceanica|type=mRNA|length=967bp
CTTCCCTCGATCCCTTCCCACTTCCCTCCCGCCACCCTAACAGAAGGCCA
CGCCCGAGGCTGCCCTCGTGAAGATGGCCGCCAAGCCCAAGACTACCAAG
CCGAAGGCTGTGGCCAAGAAGAGCAAGCCCGCTGTCAAAAAGACCAAGCT
CGCTGTCAAGAAGGCCGGTAGGTACCCCTGCCATCCCTCCGTTCCCCTTT
CCTCGTCACCGCACCACCCTATCTTACTCCCTCGCTCCTGCCTTCCCTCC
CTCCCTCACTTTCTTCCGACCTTTCAGCCCCCAAGCCCAAGGCCACCGCT
GCTAAGAAGAGCAAGCCTGCTGCCAAGAAGACCGGTAAGTACATTTCCCC
TCCCTCCCTCTTTTTCTCTTCCTTCATCCCTCTCTCTTCCTCGCCTTACC
CATCCCTCATCCTCCCTCCCTTCCCCCCTCCCTCCCTTCCTTCCAGCCCC
GAAGAAGCCCGCCGCAAAGAAGTCCAAGCCCGCGGCGAAGAAGTCCAAGC
CCGCGGCGAAGAAGGCTAAGACCACCAAGCCTAAGGTGGCTGCGAAGAAG
GGCCCCGGCCGCCCCAAGAAGGCCTAAATCATTTATTTGACTTTAGGCGA
GAGCGAGATTATAGTACGTGTGACGGAAAGCAAAAAGAGAGCTGTCGACA
GAGAGAGGGAGAGTGAAAAGTGAATACGCCATACACCGGAAACGAGGAGT
TAAAGAGAGTGACAAGAACGCATTCATCAAGGCAAGATAGTCTAGTGGGC
TGTTTGCAGATTCAGGCTAGACTACTCCATTTTTTCACACACACACCAAC
ACTACCACAACCGACACTGCCACCTATAAAGCCTAAAAAGAGAGGAATGA
AACATCAACAACAACAGAAGACCACCACGTCAAACCCACGATGAGAACGA
TGATAAGGAAAATGAGGAAACGAAGGAAAAAACAACAACCACCCTAACAT
TTACTAACTTTTGTCAA back to topprotein sequence of jgi.p|Nanoce1779_2|244833 >mRNA_547-protein ID=mRNA_547-protein|Name=jgi.p|Nanoce1779_2|244833|organism=Nannochloropsis oceanica|type=polypeptide|length=168bp
MAAKPKTTKPKAVAKKSKPAVKKTKLAVKKAGRYPCHPSVPLSSSPHHPI
LLPRSCLPSLPHFLPTFQPPSPRPPLLRRASLLPRRPVSTFPLPPSFSLP
SSLSLPRLTHPSSSLPSPLPPFLPAPKKPAAKKSKPAAKKSKPAAKKAKT
TKPKVAAKKGPGRPKKA* back to topmRNA from alignment at scaffold_3:1322231..1323662- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_547 ID=mRNA_547|Name=jgi.p|Nanoce1779_2|244833|organism=Nannochloropsis oceanica|type=mRNA|length=1432bp|location=Sequence derived from alignment at scaffold_3:1322231..1323662- (Nannochloropsis oceanica)
CTTCCCTCGATCCCTTCCCACTTCCCTCCCGCCACCCTAACAGAAGGCCA
CGCCCGAGGCTGCCCTCGTGAAGATGGCCGCCAAGCCCAAGACTACCAAG
GTAAGTTTACTCTGCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC
CTCCTTTTCTCCTTTCTATCGTTCACCGGATGACCAGCTACTCCCCTTTC
TCAACCCCTCCTTCCCCCTCTCCGTCCCTTCGTCCCTCCACCCTAACAGC
CGAAGGCTGTGGCCAAGAAGAGCAAGCCCGCTGTCAAAAAGACCAAGCTC
GCTGTCAAGAAGGCCGGTAGGTACCCCTGCCATCCCTCCGTTCCCCTTTC
CTCGTCACCGCACCACCCTATCTTACTCCCTCGCTCCTGCCTTCCCTCCC
TCCCTCACTTTCTTCCGACCTTTCAGCCCCCAAGCCCAAGGCCACCGCTG
CTAAGAAGAGCAAGCCTGCTGCCAAGAAGACCGGTAAGTACATTTCCCCT
CCCTCCCTCTTTTTCTCTTCCTTCATCCCTCTCTCTTCCTCGCCTTACCC
ATCCCTCATCCTCCCTCCCTTCCCCCCTCCCTCCCTTCCTTCCAGCCCCG
AAGAAGCCCGCCGCAAAGAAGTCCAAGCCCGCGGCGAAGAAGTCCAAGCC
CGCGGCGAAGAAGGCTAAGACCACCAAGGCAAGTCTTTACCCTCTCTCCC
TTCATTTCCTTTCTCCGTCCTCTCCTCTCGTGCATAATCCTCACCCTTCC
TCCCTTCCCCCTGCTTCCTTCCCTCCCTCTATCTCACAGCCTAAGGTGGC
TGCGAAGAAGGGCCCCGGCCGCCCCAAGAAGGCCTAAATCATTTATTTGA
CTTTAGGCGAGAGCGAGATTATAGTACGTGTGACGGAAAGCAAGTTCACA
TCTTCCCCTGTGCAGGCATGTGAGTGTGTGTATGAGGGGGGGTTAATAAG
TGTGTGTGCCTGCGGAACAGAAGTGTGCGCTCTCACCCCGGTGACTAACA
CCTAAGAGTGAAGGATCAGCAAGCGTTATAAAAAGAAGGGATGAAAAAGG
CTGGAAGTTTGATGAAAAGAAACACAAGAATCAGAATGGGAAAGCGAGAA
AGAGAGCTGTCGACAGAGAGAGGGAGAGTGAAAAGTGAATACGCCATACA
CCGGAAACGAGGAGTTAAAGAGAGTGACAAGAACGCATTCATCAAGGCAA
GATAGTCTAGTGGGCTGTTTGCAGATTCAGGCTAGACTACTCCATTTTTT
CACACACACACCAACACTACCACAACCGACACTGCCACCTATAAAGCCTA
AAAAGAGAGGAATGAAACATCAACAACAACAGAAGACCACCACGTCAAAC
CCACGATGAGAACGATGATAAGGAAAATGAGGAAACGAAGGAAAAAACAA
CAACCACCCTAACATTTACTAACTTTTGTCAA back to topCoding sequence (CDS) from alignment at scaffold_3:1322231..1323662- >mRNA_547 ID=mRNA_547|Name=jgi.p|Nanoce1779_2|244833|organism=Nannochloropsis oceanica|type=CDS|length=1512bp|location=Sequence derived from alignment at scaffold_3:1322231..1323662- (Nannochloropsis oceanica)
CCTAAGGTGGCTGCGAAGAAGGGCCCCGGCCGCCCCAAGAAGGCCTAACC
GAAGGCTGTGGCCAAGAAGAGCAAGCCCGCTGTCAAAAAGACCAAGCTCG
CTGTCAAGAAGGCCGGTAGGTACCCCTGCCATCCCTCCGTTCCCCTTTCC
TCGTCACCGCACCACCCTATCTTACTCCCTCGCTCCTGCCTTCCCTCCCT
CCCTCACTTTCTTCCGACCTTTCAGCCCCCAAGCCCAAGGCCACCGCTGC
TAAGAAGAGCAAGCCTGCTGCCAAGAAGACCGGTAAGTACATTTCCCCTC
CCTCCCTCTTTTTCTCTTCCTTCATCCCTCTCTCTTCCTCGCCTTACCCA
TCCCTCATCCTCCCTCCCTTCCCCCCTCCCTCCCTTCCTTCCAGCCCCGA
AGAAGCCCGCCGCAAAGAAGTCCAAGCCCGCGGCGAAGAAGTCCAAGCCC
GCGGCGAAGAAGGCTAAGACCACCAAGATGGCCGCCAAGCCCAAGACTAC
CAAGCCTAAGGTGGCTGCGAAGAAGGGCCCCGGCCGCCCCAAGAAGGCCT
AACCGAAGGCTGTGGCCAAGAAGAGCAAGCCCGCTGTCAAAAAGACCAAG
CTCGCTGTCAAGAAGGCCGGTAGGTACCCCTGCCATCCCTCCGTTCCCCT
TTCCTCGTCACCGCACCACCCTATCTTACTCCCTCGCTCCTGCCTTCCCT
CCCTCCCTCACTTTCTTCCGACCTTTCAGCCCCCAAGCCCAAGGCCACCG
CTGCTAAGAAGAGCAAGCCTGCTGCCAAGAAGACCGGTAAGTACATTTCC
CCTCCCTCCCTCTTTTTCTCTTCCTTCATCCCTCTCTCTTCCTCGCCTTA
CCCATCCCTCATCCTCCCTCCCTTCCCCCCTCCCTCCCTTCCTTCCAGCC
CCGAAGAAGCCCGCCGCAAAGAAGTCCAAGCCCGCGGCGAAGAAGTCCAA
GCCCGCGGCGAAGAAGGCTAAGACCACCAAGATGGCCGCCAAGCCCAAGA
CTACCAAGCCTAAGGTGGCTGCGAAGAAGGGCCCCGGCCGCCCCAAGAAG
GCCTAACCGAAGGCTGTGGCCAAGAAGAGCAAGCCCGCTGTCAAAAAGAC
CAAGCTCGCTGTCAAGAAGGCCGGTAGGTACCCCTGCCATCCCTCCGTTC
CCCTTTCCTCGTCACCGCACCACCCTATCTTACTCCCTCGCTCCTGCCTT
CCCTCCCTCCCTCACTTTCTTCCGACCTTTCAGCCCCCAAGCCCAAGGCC
ACCGCTGCTAAGAAGAGCAAGCCTGCTGCCAAGAAGACCGGTAAGTACAT
TTCCCCTCCCTCCCTCTTTTTCTCTTCCTTCATCCCTCTCTCTTCCTCGC
CTTACCCATCCCTCATCCTCCCTCCCTTCCCCCCTCCCTCCCTTCCTTCC
AGCCCCGAAGAAGCCCGCCGCAAAGAAGTCCAAGCCCGCGGCGAAGAAGT
CCAAGCCCGCGGCGAAGAAGGCTAAGACCACCAAGATGGCCGCCAAGCCC
AAGACTACCAAG back to top
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