Properties
| Property Name | Value |
|---|
| TranscriptId | 631154 |
| Track | FilteredModels2 |
| ProteinId | 631068 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_13 | supercontig | scaffold_13:449199..450338 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_5448 ID=mRNA_5448|Name=jgi.p|Nanoce1779_2|631068|organism=Nannochloropsis oceanica|type=mRNA|length=1029bp
ACAGGCGCAACCCACCGAAACATTATTAAGACCCCTTTTCCCAGACCCCC
CTCGCCAGAGAAGCAGCCTTCTACGCCTCCCGGCTCCCATCCTTCACCAC
CACAATCCACGTCTAGAATGCACGCCCCAACCCTAGGACACAGCAGTCAG
GACCTGTTGCTGGATCCGGCCATCCGCAACTGGGGCGTACTGCCCATCCT
GGTCTTTGTGATGTGCATCAATCTCTTGCGGGCATACCTGACCCACTTAG
GCAAGAGCAACAAGGCCCCCGAGCTTGACGATTTAAGACGACGACAGACT
TTGGCGCGTGCCGATAGGTTACGGACCAAAGGCAATTTCATCCATCAACA
GGGTTTTAATGCGCGGAAGGCTTGGTTTGTTGATAAGGAAAAGGGGGAGG
GGGTCTTATTGGAGGAAGGAGTACCGGGAGCGGTTAACCCCATGTCGAAT
CCGATGGGAATGATGGAGATGGTAAAGGGACAGGCGTACTTCGGCATGAC
TCAGATGGGAATGATGCAATTTTCTGAGATGTTTTTTTCTGGATTTGTCC
TGGTGAAAATTCCGTTTGCTCTGACGGCATCGTTCAAGGGGATGCTGCAA
CGAGGCATCGAATTGTCAACGCTGGACGCATCATATGTCAGTGCTACCTC
GTGGATGTTCTTGGTGGCGTTCGGCGTGAAGGATTTGCAACGTCTCTTTA
CCTTTGACGAGGAATCCTTGCAAGAGGAAGCACGGGTGTACGGACAACAG
ATGGGAGGCGTGCCTGTAGGAGGAGGGCCCCCGGCACCGATGGGGTTTGA
TTGCGCGAAAATGTTCATGGCGGCCAAAGAGGGACTGGAGGTGGTCCGGC
ATCGATTCGAACTAGAAGAGGTCGAGAAACGCCTGCTGGGGGACCGATAC
CCGGCCATGTTGTCGGCGACAGAACGATTCCTATCCTTGGAGGAAGAGGC
GAGAAAGATGTTGAGGAAGGGAGACGAGAAGGCGGGCCTGGGGAAACGAC
CTTCCAAGTCGACGCTGAAGAAAGAGTGA back to topprotein sequence of jgi.p|Nanoce1779_2|631068 >mRNA_5448-protein ID=mRNA_5448-protein|Name=jgi.p|Nanoce1779_2|631068|organism=Nannochloropsis oceanica|type=polypeptide|length=304bp
MHAPTLGHSSQDLLLDPAIRNWGVLPILVFVMCINLLRAYLTHLGKSNKA
PELDDLRRRQTLARADRLRTKGNFIHQQGFNARKAWFVDKEKGEGVLLEE
GVPGAVNPMSNPMGMMEMVKGQAYFGMTQMGMMQFSEMFFSGFVLVKIPF
ALTASFKGMLQRGIELSTLDASYVSATSWMFLVAFGVKDLQRLFTFDEES
LQEEARVYGQQMGGVPVGGGPPAPMGFDCAKMFMAAKEGLEVVRHRFELE
EVEKRLLGDRYPAMLSATERFLSLEEEARKMLRKGDEKAGLGKRPSKSTL
KKE* back to topmRNA from alignment at scaffold_13:449199..450338+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_5448 ID=mRNA_5448|Name=jgi.p|Nanoce1779_2|631068|organism=Nannochloropsis oceanica|type=mRNA|length=1140bp|location=Sequence derived from alignment at scaffold_13:449199..450338+ (Nannochloropsis oceanica)
ACAGGCGCAACCCACCGAAACATTATTAAGACCCCTTTTCCCAGACCCCC
CTCGCCAGAGAAGCAGCCTTCTACGCCTCCCGGCTCCCATCCTTCACCAC
CACAATCCACGTCTAGAATGCACGCCCCAACCCTAGGACACAGCAGTCAG
GACCTGTTGCTGGATCCGGCCATCCGCAACTGGGGCGTACTGCCCATCCT
GGTCTTTGTGATGTGCATCAATCTCTTGCGGGCATACCTGACCCACTTAG
GCAAGAGCAACAAGGCCCCCGAGCTTGACGATTTAAGACGACGACAGACT
TTGGCGCGTGCCGATAGGTTACGGACCAAAGGCAATTTCATCCATCAACA
GGGTTTTAATGCGCGGAAGGCTTGGTTTGTTGATAAGGAAAAGGGGGAGG
GGGTCTTATTGGAGGAAGGAGTACCGGGAGCGGTTAACCCCATGTCGAAT
CCGATGGGAATGATGGAGATGGTAAAGGGACAGGCGTACTTCGGCATGAC
TCAGATGGGAATGATGCAATTTTCTGAGATGTTTTTTTCTGGATTTGTCC
TGGTGAAAATTCCGTTTGCTCTGACGGCATCGTTCAAGGGGATGCTGCAA
CGAGGCATCGAATTGTCAACGCTGGACGCATCATATGTCAGTGCTACCTC
GTGGATGTTCTTGGTGGCGTTCGGCGTGAAGGATTTGCAACGTCTCTTTA
CCTTTGACGAGGAATCCTTGCAAGAGGAAGCACGGGTGTACGGACAACAG
ATGGGAGGCGTGCCTGTAGGAGGAGGGCCCCCGGCACCGATGGGGTTTGA
TTGCGCGAAAATGTTCATGGCGGCCAAAGAGGGACTGGAGGTGGTCCGGC
ATCGATTCGAACTAGAAGAGGTCGAGAAACGCCTGCTGGGGGACCGATAC
CCGGCCATGTTGTCGGCGACAGGTATGTGAGGGAGGGAGGGAGGGAGGGA
GGGAGGGGGGAAAGCTGACTTCGAAGCTCTGGCTTGTCGTCGTGCATTTT
CTCATATTCATTCCTCATGTATGAAACACACAGAACGATTCCTATCCTTG
GAGGAAGAGGCGAGAAAGATGTTGAGGAAGGGAGACGAGAAGGCGGGCCT
GGGGAAACGACCTTCCAAGTCGACGCTGAAGAAAGAGTGA back to topCoding sequence (CDS) from alignment at scaffold_13:449199..450338+ >mRNA_5448 ID=mRNA_5448|Name=jgi.p|Nanoce1779_2|631068|organism=Nannochloropsis oceanica|type=CDS|length=1824bp|location=Sequence derived from alignment at scaffold_13:449199..450338+ (Nannochloropsis oceanica)
ATGCACGCCCCAACCCTAGGACACAGCAGTCAGGACCTGTTGCTGGATCC
GGCCATCCGCAACTGGGGCGTACTGCCCATCCTGGTCTTTGTGATGTGCA
TCAATCTCTTGCGGGCATACCTGACCCACTTAGGCAAGAGCAACAAGGCC
CCCGAGCTTGACGATTTAAGACGACGACAGACTTTGGCGCGTGCCGATAG
GTTACGGACCAAAGGCAATTTCATCCATCAACAGGGTTTTAATGCGCGGA
AGGCTTGGTTTGTTGATAAGGAAAAGGGGGAGGGGGTCTTATTGGAGGAA
GGAGTACCGGGAGCGGTTAACCCCATGTCGAATCCGATGGGAATGATGGA
GATGGTAAAGGGACAGGCGTACTTCGGCATGACTCAGATGGGAATGATGC
AATTTTCTGAGATGTTTTTTTCTGGATTTGTCCTGGTGAAAATTCCGTTT
GCTCTGACGGCATCGTTCAAGGGGATGCTGCAACGAGGCATCGAATTGTC
AACGCTGGACGCATCATATGTCAGTGCTACCTCGTGGATGTTCTTGGTGG
CGTTCGGCGTGAAGGATTTGCAACGTCTCTTTACCTTTGACGAGGAATCC
TTGCAAGAGGAAGCACGGGTGTACGGACAACAGATGGGAGGCGTGCCTGT
AGGAGGAGGGCCCCCGGCACCGATGGGGTTTGATTGCGCGAAAATGTTCA
TGGCGGCCAAAGAGGGACTGGAGGTGGTCCGGCATCGATTCGAACTAGAA
GAGGTCGAGAAACGCCTGCTGGGGGACCGATACCCGGCCATGTTGTCGGC
GACAGAACGATTCCTATCCTTGGAGGAAGAGGCGAGAAAGATGTTGAGGA
AGGGAGACGAGAAGGCGGGCCTGGGGAAACGACCTTCCAAGTCGACGCTG
AAGAAAGAGTGAATGCACGCCCCAACCCTAGGACACAGCAGTCAGGACCT
GTTGCTGGATCCGGCCATCCGCAACTGGGGCGTACTGCCCATCCTGGTCT
TTGTGATGTGCATCAATCTCTTGCGGGCATACCTGACCCACTTAGGCAAG
AGCAACAAGGCCCCCGAGCTTGACGATTTAAGACGACGACAGACTTTGGC
GCGTGCCGATAGGTTACGGACCAAAGGCAATTTCATCCATCAACAGGGTT
TTAATGCGCGGAAGGCTTGGTTTGTTGATAAGGAAAAGGGGGAGGGGGTC
TTATTGGAGGAAGGAGTACCGGGAGCGGTTAACCCCATGTCGAATCCGAT
GGGAATGATGGAGATGGTAAAGGGACAGGCGTACTTCGGCATGACTCAGA
TGGGAATGATGCAATTTTCTGAGATGTTTTTTTCTGGATTTGTCCTGGTG
AAAATTCCGTTTGCTCTGACGGCATCGTTCAAGGGGATGCTGCAACGAGG
CATCGAATTGTCAACGCTGGACGCATCATATGTCAGTGCTACCTCGTGGA
TGTTCTTGGTGGCGTTCGGCGTGAAGGATTTGCAACGTCTCTTTACCTTT
GACGAGGAATCCTTGCAAGAGGAAGCACGGGTGTACGGACAACAGATGGG
AGGCGTGCCTGTAGGAGGAGGGCCCCCGGCACCGATGGGGTTTGATTGCG
CGAAAATGTTCATGGCGGCCAAAGAGGGACTGGAGGTGGTCCGGCATCGA
TTCGAACTAGAAGAGGTCGAGAAACGCCTGCTGGGGGACCGATACCCGGC
CATGTTGTCGGCGACAGAACGATTCCTATCCTTGGAGGAAGAGGCGAGAA
AGATGTTGAGGAAGGGAGACGAGAAGGCGGGCCTGGGGAAACGACCTTCC
AAGTCGACGCTGAAGAAAGAGTGA back to top
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