Properties
Property Name | Value |
TranscriptId | 529508 |
Track | FilteredModels2 |
ProteinId | 529422 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_13 | supercontig | scaffold_13:304006..305319 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_5382 ID=mRNA_5382|Name=jgi.p|Nanoce1779_2|529422|organism=Nannochloropsis oceanica|type=mRNA|length=1314bp ATGGACCCTGAGTTGCGGTATTTTTTGACTGTCAAAACCCACACCAATAT ATCCCAAATCGCGGAGGAAGAATGGAATTCCATGCTGCGTTTCGAAGACT CACCCTTCTTGCACCACCAATGGCTGAATTGCATGGAGACTAGTGGATGC GCCATTCCGGCCACAGGGTGGAACCCGTGTCATCTCACCATTCGCATGGT CAAGGGCAAGGATGGAGAAGTCACAGACCCCAATGATCCTGGAGATTTGG TGGCAGCTGCACCAGTATACATTAAGACACACAGCATGGGCGAGTTTATT TTTGACAATGAATGGGCGAATGCCGCCTATCGCTCCGGCATCGACTATTA CCCGAAAGTTCTATGTGCGGTACCTTTTACTCCGGCCTCCGGCGCCCGGC TGCTGCTCAAGCAAGGCTTATCTCAACCGATGCAGCAGGAAATCAGGCGG ATGGTTGGAGTGTTTTTGCAAGAGCTGGCGAAGAACAACGAGTTTTCATC GGTCCACGTGAATTTCTGCCAGGAGGAAGAGGTGGCGCCTTTGAGTGCCA CCTCCCCTCCCTACTTGCACCGGACCTCCATGCAATTTCACTGGAGGAAT GAGAATAAGGACAAGGAAGGGGCGCCGTATGACAGTTTCGACGAGTACTT GGCGGCGTTTCGGAGCAAGCGGAGGATAAAGATCAAGAAGGAAAGGAGGA CTGTTTACGAGGCCGGTCTCACGTTAGACGTCTACAGGGGGAAGGAGATA CCAGATAGTTTCTTTGATGACGACACAATCTTCAAACTGTACGTGAGCAC GATTGACAAGCTGTTTTATGGGCGGCAATATTTGAATGAAGAATTCTTCC GGATGCTCAAGGAGAAATTTCGGGACCCGTTATGCTTGGTGGTTGCCAAG GATGCAAAGGGGGAGATCGTGGCTGGGACCTTCAATGTGATCGGTAATGA CAAGCGATTCTATGGCCGGTATTGGGGTTGTGTCCTGCCGGAGGAAATTA AAAACTTGCACTTTGAGACGTGTTACTACAAGTCGATTGAGTACTGTATC GAGAAAGGCTTGGCCGCCATGGAGCCGGGAGCGGGAAATTCCGACTTCAA GTTTATGCGAGGCTTTGAGCCGGCCCAGGTGCACTCAATGCATCACATTG TCCACCCCGGATTACGGCAAGCGGTTGACGACTTTTTGAAGTACGAAAGG AGGGAAGTAGCGGGCACGGTGGATTACTTGAGTGGGAAGAGCGCTGTGCG GGCCAGGGGAGGGAAGGGGGCAGAGGAAGGAGAAGAAGAGGGGAATGGGA AGATGGAATTGTGA back to topprotein sequence of jgi.p|Nanoce1779_2|529422 >mRNA_5382-protein ID=mRNA_5382-protein|Name=jgi.p|Nanoce1779_2|529422|organism=Nannochloropsis oceanica|type=polypeptide|length=438bp MDPELRYFLTVKTHTNISQIAEEEWNSMLRFEDSPFLHHQWLNCMETSGC AIPATGWNPCHLTIRMVKGKDGEVTDPNDPGDLVAAAPVYIKTHSMGEFI FDNEWANAAYRSGIDYYPKVLCAVPFTPASGARLLLKQGLSQPMQQEIRR MVGVFLQELAKNNEFSSVHVNFCQEEEVAPLSATSPPYLHRTSMQFHWRN ENKDKEGAPYDSFDEYLAAFRSKRRIKIKKERRTVYEAGLTLDVYRGKEI PDSFFDDDTIFKLYVSTIDKLFYGRQYLNEEFFRMLKEKFRDPLCLVVAK DAKGEIVAGTFNVIGNDKRFYGRYWGCVLPEEIKNLHFETCYYKSIEYCI EKGLAAMEPGAGNSDFKFMRGFEPAQVHSMHHIVHPGLRQAVDDFLKYER REVAGTVDYLSGKSAVRARGGKGAEEGEEEGNGKMEL* back to topmRNA from alignment at scaffold_13:304006..305319+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_5382 ID=mRNA_5382|Name=jgi.p|Nanoce1779_2|529422|organism=Nannochloropsis oceanica|type=mRNA|length=1314bp|location=Sequence derived from alignment at scaffold_13:304006..305319+ (Nannochloropsis oceanica) ATGGACCCTGAGTTGCGGTATTTTTTGACTGTCAAAACCCACACCAATAT
ATCCCAAATCGCGGAGGAAGAATGGAATTCCATGCTGCGTTTCGAAGACT
CACCCTTCTTGCACCACCAATGGCTGAATTGCATGGAGACTAGTGGATGC
GCCATTCCGGCCACAGGGTGGAACCCGTGTCATCTCACCATTCGCATGGT
CAAGGGCAAGGATGGAGAAGTCACAGACCCCAATGATCCTGGAGATTTGG
TGGCAGCTGCACCAGTATACATTAAGACACACAGCATGGGCGAGTTTATT
TTTGACAATGAATGGGCGAATGCCGCCTATCGCTCCGGCATCGACTATTA
CCCGAAAGTTCTATGTGCGGTACCTTTTACTCCGGCCTCCGGCGCCCGGC
TGCTGCTCAAGCAAGGCTTATCTCAACCGATGCAGCAGGAAATCAGGCGG
ATGGTTGGAGTGTTTTTGCAAGAGCTGGCGAAGAACAACGAGTTTTCATC
GGTCCACGTGAATTTCTGCCAGGAGGAAGAGGTGGCGCCTTTGAGTGCCA
CCTCCCCTCCCTACTTGCACCGGACCTCCATGCAATTTCACTGGAGGAAT
GAGAATAAGGACAAGGAAGGGGCGCCGTATGACAGTTTCGACGAGTACTT
GGCGGCGTTTCGGAGCAAGCGGAGGATAAAGATCAAGAAGGAAAGGAGGA
CTGTTTACGAGGCCGGTCTCACGTTAGACGTCTACAGGGGGAAGGAGATA
CCAGATAGTTTCTTTGATGACGACACAATCTTCAAACTGTACGTGAGCAC
GATTGACAAGCTGTTTTATGGGCGGCAATATTTGAATGAAGAATTCTTCC
GGATGCTCAAGGAGAAATTTCGGGACCCGTTATGCTTGGTGGTTGCCAAG
GATGCAAAGGGGGAGATCGTGGCTGGGACCTTCAATGTGATCGGTAATGA
CAAGCGATTCTATGGCCGGTATTGGGGTTGTGTCCTGCCGGAGGAAATTA
AAAACTTGCACTTTGAGACGTGTTACTACAAGTCGATTGAGTACTGTATC
GAGAAAGGCTTGGCCGCCATGGAGCCGGGAGCGGGAAATTCCGACTTCAA
GTTTATGCGAGGCTTTGAGCCGGCCCAGGTGCACTCAATGCATCACATTG
TCCACCCCGGATTACGGCAAGCGGTTGACGACTTTTTGAAGTACGAAAGG
AGGGAAGTAGCGGGCACGGTGGATTACTTGAGTGGGAAGAGCGCTGTGCG
GGCCAGGGGAGGGAAGGGGGCAGAGGAAGGAGAAGAAGAGGGGAATGGGA
AGATGGAATTGTGA back to topCoding sequence (CDS) from alignment at scaffold_13:304006..305319+ >mRNA_5382 ID=mRNA_5382|Name=jgi.p|Nanoce1779_2|529422|organism=Nannochloropsis oceanica|type=CDS|length=1314bp|location=Sequence derived from alignment at scaffold_13:304006..305319+ (Nannochloropsis oceanica) ATGGACCCTGAGTTGCGGTATTTTTTGACTGTCAAAACCCACACCAATAT ATCCCAAATCGCGGAGGAAGAATGGAATTCCATGCTGCGTTTCGAAGACT CACCCTTCTTGCACCACCAATGGCTGAATTGCATGGAGACTAGTGGATGC GCCATTCCGGCCACAGGGTGGAACCCGTGTCATCTCACCATTCGCATGGT CAAGGGCAAGGATGGAGAAGTCACAGACCCCAATGATCCTGGAGATTTGG TGGCAGCTGCACCAGTATACATTAAGACACACAGCATGGGCGAGTTTATT TTTGACAATGAATGGGCGAATGCCGCCTATCGCTCCGGCATCGACTATTA CCCGAAAGTTCTATGTGCGGTACCTTTTACTCCGGCCTCCGGCGCCCGGC TGCTGCTCAAGCAAGGCTTATCTCAACCGATGCAGCAGGAAATCAGGCGG ATGGTTGGAGTGTTTTTGCAAGAGCTGGCGAAGAACAACGAGTTTTCATC GGTCCACGTGAATTTCTGCCAGGAGGAAGAGGTGGCGCCTTTGAGTGCCA CCTCCCCTCCCTACTTGCACCGGACCTCCATGCAATTTCACTGGAGGAAT GAGAATAAGGACAAGGAAGGGGCGCCGTATGACAGTTTCGACGAGTACTT GGCGGCGTTTCGGAGCAAGCGGAGGATAAAGATCAAGAAGGAAAGGAGGA CTGTTTACGAGGCCGGTCTCACGTTAGACGTCTACAGGGGGAAGGAGATA CCAGATAGTTTCTTTGATGACGACACAATCTTCAAACTGTACGTGAGCAC GATTGACAAGCTGTTTTATGGGCGGCAATATTTGAATGAAGAATTCTTCC GGATGCTCAAGGAGAAATTTCGGGACCCGTTATGCTTGGTGGTTGCCAAG GATGCAAAGGGGGAGATCGTGGCTGGGACCTTCAATGTGATCGGTAATGA CAAGCGATTCTATGGCCGGTATTGGGGTTGTGTCCTGCCGGAGGAAATTA AAAACTTGCACTTTGAGACGTGTTACTACAAGTCGATTGAGTACTGTATC GAGAAAGGCTTGGCCGCCATGGAGCCGGGAGCGGGAAATTCCGACTTCAA GTTTATGCGAGGCTTTGAGCCGGCCCAGGTGCACTCAATGCATCACATTG TCCACCCCGGATTACGGCAAGCGGTTGACGACTTTTTGAAGTACGAAAGG AGGGAAGTAGCGGGCACGGTGGATTACTTGAGTGGGAAGAGCGCTGTGCG GGCCAGGGGAGGGAAGGGGGCAGAGGAAGGAGAAGAAGAGGGGAATGGGA AGATGGAATTGTGA back to top
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