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Properties
| Property Name | Value |
|---|
| TranscriptId | 631105 |
| Track | FilteredModels2 |
| ProteinId | 631019 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_13 | supercontig | scaffold_13:302120..303445 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_5381 ID=mRNA_5381|Name=jgi.p|Nanoce1779_2|631019|organism=Nannochloropsis oceanica|type=mRNA|length=917bp
GAGTTGGTCGTTGAGGCGGCGAAGAGGGCACATCGACGGACGACATGAGG
GCGGGGAGGTTGTGTTTCTATCTTCGACGCATCTCATCACAACCACCGCA
CCCCATATACTGCACACACAGCGCAGAGCCATGGCTTCGGGCGCGATTGA
GCAGCGTAACCAGGATGCGACAGTCTACTGCGGCGGGCTGGACGAGAAGG
TGACGGAGGATTTGCTGTGGGAACTCATGCAGAACGTGGGGCCGGTGGTC
CACGTCCATATGCCCCGGGACAAGGTTACGGGTTCGCACCAGTGCTTTGG
CTTTGTCGAGTTCCGTTCCGAGGAGGACGCGGACTATGCGGTGAAGATCA
TGAACATGGTGCGGATGTATGGGAAGCCCCTCCGTGTGAACAAGGCTTCG
CAAGACCGGCGTACCGTGGACGTTGGGGCCAACCTCTTTATTGGCAACCT
GGCTGCGGAGGTGGACGAGAAGGACCTGTACGACACCTTTTCAGCGTTCG
GTGGCATCACCCAACCCCCTAAAGTTATGTTTGACGCGGACACGGGCCAC
ACCAAGGGCTTTGGGTTCGTGTCGTACGATAGCTTCGAGGCGGCGGATTA
TGCGATCGAGTGCATGAACGGGGCTTACTTGGGCGGGCGCCCTATCTGCG
TGCAATATGCCTACAAAAAAGACAGTAAGGGCGAGCGTCATGGGTCTCAA
GCAGAGCGTTTGCTGGCGGCGTCCACGCAGACGACGGTGCGCTTCAAGGC
TCACACACTCTTTGCCTCGGGCCCTGGCCAATTTGGCACCGGGCATCATA
ATTAGTGAGAGAGTGTGACATTGAAACACGATGCATTGTCAATGAAAAAG
CGTGCTTGCGCGGGCGACAAAGCGAGACACAAAAAGAAAGAAAGGCTAGA
AGGGCAAAACAATGTGA back to topprotein sequence of jgi.p|Nanoce1779_2|631019 >mRNA_5381-protein ID=mRNA_5381-protein|Name=jgi.p|Nanoce1779_2|631019|organism=Nannochloropsis oceanica|type=polypeptide|length=225bp
MASGAIEQRNQDATVYCGGLDEKVTEDLLWELMQNVGPVVHVHMPRDKVT
GSHQCFGFVEFRSEEDADYAVKIMNMVRMYGKPLRVNKASQDRRTVDVGA
NLFIGNLAAEVDEKDLYDTFSAFGGITQPPKVMFDADTGHTKGFGFVSYD
SFEAADYAIECMNGAYLGGRPICVQYAYKKDSKGERHGSQAERLLAASTQ
TTVRFKAHTLFASGPGQFGTGHHN* back to topmRNA from alignment at scaffold_13:302120..303445- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_5381 ID=mRNA_5381|Name=jgi.p|Nanoce1779_2|631019|organism=Nannochloropsis oceanica|type=mRNA|length=1326bp|location=Sequence derived from alignment at scaffold_13:302120..303445- (Nannochloropsis oceanica)
GAGTTGGTCGTTGAGGCGGCGAAGAGGGCACATCGACGGACGACATGAGG
GCGGGGAGGTTGTGTTTCTATCTTCGACGCATCTCATCACAACCACCGCA
CCCCATATACTGCACACACAGCGCAGAGCCATGGCTTCGGGCGCGATTGA
GCAGCGTAACCAGGATGCGACAGTCTACTGCGGCGGGCTGGACGAGAAGG
TGACGGAGGATTTGCTGTGGGAACTCATGCAGAACGTGGGGCCGGTGGTC
CACGTCCATATGCCCCGGGACAAGGTTACGGGTTCGCACCAGTGCTTTGG
CTTTGTCGAGTTCCGTTCCGAGGAGGACGCGGACTATGCGGTGAAGATCA
TGAACATGGTGCGGATGTATGGGAAGCCCCTCCGTGTGAACAAGGCTTCG
CAAGACCGGCGTACCGTGGACGTTGGGGCCAACCTCTTTATTGGCAACCT
GGCTGCGGAGGTGGACGAGAAGGACCTGTACGACACCTTTTCAGCGTTCG
GTGGCATCACCCAACCCCCTAAAGTTATGTTTGACGCGGACACGGGCCAC
ACCAAGGGCTTTGGGTTCGTGTCGTACGATAGCTTCGAGGCGGCGGATTA
TGCGATCGAGTGCATGAACGGGGCTTACTTGGGCGGGCGCCCTATCTGCG
TGCAATATGCCTACAAAAAAGACAGTAAGGGCGAGCGTCATGGGTCTCAA
GCAGAGCGTTTGCTGGCGGCGTCCACGCAGACGACGGTGCGCTTCAAGGC
TCACACACTCTTTGCCTCGGGCCCTGGCCAATTTGGCACCGGTATGGGTG
GCGCTCCCTCTCCTCCCCCACCACCCCCCACCATGGGCGTGTACGCACAA
CAGCAACAGCAACTACATCACCAATACTATCCGCCGCCTCCTCCCGGTTC
ACAAGGGGGCATGCCGCCTCCGCCACCACCCCCACCGCCTCCCGGATACG
GGCAGCAGCCACAATATTATGCCCCCCCCCCCCCCCCCTCCTCCGCCTGC
CATGGGCATGTACCAGCCCCAGCAGTACTACACTACTCCTCCCCCTCCTC
CTCCTCCTCCCCCTCCTCCTCCCCAGTTCTCACCGCAACACCAGCAGCAA
ATCTCGTCTCTTCCCCCTCCCCCCCCTCCTCCCCCCCGTCAACAGCAATA
CTACGCACCTCCTCCCCCACCTCCTCCTCCACCTCCTCCTCCCCCATCAG
GGCATCATAATTAGTGAGAGAGTGTGACATTGAAACACGATGCATTGTCA
ATGAAAAAGCGTGCTTGCGCGGGCGACAAAGCGAGACACAAAAAGAAAGA
AAGGCTAGAAGGGCAAAACAATGTGA back to topCoding sequence (CDS) from alignment at scaffold_13:302120..303445- >mRNA_5381 ID=mRNA_5381|Name=jgi.p|Nanoce1779_2|631019|organism=Nannochloropsis oceanica|type=CDS|length=1350bp|location=Sequence derived from alignment at scaffold_13:302120..303445- (Nannochloropsis oceanica)
GGCATCATAATTAGATGGCTTCGGGCGCGATTGAGCAGCGTAACCAGGAT
GCGACAGTCTACTGCGGCGGGCTGGACGAGAAGGTGACGGAGGATTTGCT
GTGGGAACTCATGCAGAACGTGGGGCCGGTGGTCCACGTCCATATGCCCC
GGGACAAGGTTACGGGTTCGCACCAGTGCTTTGGCTTTGTCGAGTTCCGT
TCCGAGGAGGACGCGGACTATGCGGTGAAGATCATGAACATGGTGCGGAT
GTATGGGAAGCCCCTCCGTGTGAACAAGGCTTCGCAAGACCGGCGTACCG
TGGACGTTGGGGCCAACCTCTTTATTGGCAACCTGGCTGCGGAGGTGGAC
GAGAAGGACCTGTACGACACCTTTTCAGCGTTCGGTGGCATCACCCAACC
CCCTAAAGTTATGTTTGACGCGGACACGGGCCACACCAAGGGCTTTGGGT
TCGTGTCGTACGATAGCTTCGAGGCGGCGGATTATGCGATCGAGTGCATG
AACGGGGCTTACTTGGGCGGGCGCCCTATCTGCGTGCAATATGCCTACAA
AAAAGACAGTAAGGGCGAGCGTCATGGGTCTCAAGCAGAGCGTTTGCTGG
CGGCGTCCACGCAGACGACGGTGCGCTTCAAGGCTCACACACTCTTTGCC
TCGGGCCCTGGCCAATTTGGCACCGGGCATCATAATTAGATGGCTTCGGG
CGCGATTGAGCAGCGTAACCAGGATGCGACAGTCTACTGCGGCGGGCTGG
ACGAGAAGGTGACGGAGGATTTGCTGTGGGAACTCATGCAGAACGTGGGG
CCGGTGGTCCACGTCCATATGCCCCGGGACAAGGTTACGGGTTCGCACCA
GTGCTTTGGCTTTGTCGAGTTCCGTTCCGAGGAGGACGCGGACTATGCGG
TGAAGATCATGAACATGGTGCGGATGTATGGGAAGCCCCTCCGTGTGAAC
AAGGCTTCGCAAGACCGGCGTACCGTGGACGTTGGGGCCAACCTCTTTAT
TGGCAACCTGGCTGCGGAGGTGGACGAGAAGGACCTGTACGACACCTTTT
CAGCGTTCGGTGGCATCACCCAACCCCCTAAAGTTATGTTTGACGCGGAC
ACGGGCCACACCAAGGGCTTTGGGTTCGTGTCGTACGATAGCTTCGAGGC
GGCGGATTATGCGATCGAGTGCATGAACGGGGCTTACTTGGGCGGGCGCC
CTATCTGCGTGCAATATGCCTACAAAAAAGACAGTAAGGGCGAGCGTCAT
GGGTCTCAAGCAGAGCGTTTGCTGGCGGCGTCCACGCAGACGACGGTGCG
CTTCAAGGCTCACACACTCTTTGCCTCGGGCCCTGGCCAATTTGGCACCG back to top
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