Properties
Property Name | Value |
TranscriptId | 64404 |
Track | FilteredModels2 |
ProteinId | 64318 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_13 | supercontig | scaffold_13:259658..260609 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_5367 ID=mRNA_5367|Name=jgi.p|Nanoce1779_2|64318|organism=Nannochloropsis oceanica|type=mRNA|length=839bp GGTTTGCACGGCGCAGTGTCATTCAGGGTCGGCATGCGCCATTAAAAACC GTTCCTGGTGTACCACCGAGAAACAAATCAAGTCAGGGGGGGAATACGTA ATATTATAATAGAGTTTAAAGAATTTTGTTATTATGCTTGATCCAGCAAT GTCAATGCGGTGTCATTGCTGCCAAAAACAAGGTCACGTCAACCTATACA TGCGTCATGCACCCCCCATGAACAAACAGCACCATGGCAAGCACGGGAAT TTGCAAAGGCGAGACGGCATGGCTGCAGAAGACCATCACAGTGCAGGCTG AAGGGCGGGGATGTGAACTCATCACAAAACAAGTAGTAGATGCCGTCCCT GAGCTGCGCAAATTTTCCGTCGGCACGCTTACCGTCTTCATTCAGCACAC TTCTGCCTCTCTTTCTATCAACGAAAACGCCGACCCTACCGTCCGCACAG ACATGGAGAAAGCCCTGAACATGATCGTCCCTGATAGCTGGGCGACGGGC GGCTTGCTGGATCACGTTGACGAAGGGCCTGACGATATTACGGGCCATGT GAAGGCAACCCTTGTAGGAGCAAATTTGACCATACCTGTCATGAAGGGCC GACTAGCTCTCGGTACGTGGCAGGGTATCTATCTGTGCGAGCATCGCAAC GCGGGCGGTTATGGAGGAGGCCACGCGCGGCGCCTCATCATTACGATTCA TGGTCTAGTGTGTTCTTGAGCGTTAGAGGAGGGGGCAGCGGATCAGTACG GATTCGAGTGGGCAGGGAAAATGGTTGGATGACCGGTGAGGCATAAGACG AACCACATAACATGAAACTTCAAGCCCCCCCGGGGGGAT back to topprotein sequence of jgi.p|Nanoce1779_2|64318 >mRNA_5367-protein ID=mRNA_5367-protein|Name=jgi.p|Nanoce1779_2|64318|organism=Nannochloropsis oceanica|type=polypeptide|length=162bp MASTGICKGETAWLQKTITVQAEGRGCELITKQVVDAVPELRKFSVGTLT VFIQHTSASLSINENADPTVRTDMEKALNMIVPDSWATGGLLDHVDEGPD DITGHVKATLVGANLTIPVMKGRLALGTWQGIYLCEHRNAGGYGGGHARR LIITIHGLVCS* back to topmRNA from alignment at scaffold_13:259658..260609- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_5367 ID=mRNA_5367|Name=jgi.p|Nanoce1779_2|64318|organism=Nannochloropsis oceanica|type=mRNA|length=952bp|location=Sequence derived from alignment at scaffold_13:259658..260609- (Nannochloropsis oceanica) GGTTTGCACGGCGCAGTGTCATTCAGGGTCGGCATGCGCCATTAAAAACC
GTTCCTGGTGTACCACCGAGAAACAAATCAAGTCAGGGGGGGAATACGTA
ATATTATAATAGAGTTTAAAGAATTTTGTTATTATGCTTGATCCAGCAAT
GTCAATGCGGTGTCATTGCTGCCAAAAACAAGGTCACGTCAACCTATACA
TGCGTCATGCACCCCCCATGAACAAACAGCACCATGGCAAGCACGGGAAT
TTGCAAAGGCGAGACGGCATGGCTGCAGAAGACCATCACAGTGCAGGCTG
AAGGGCGGGGATGTGAACTCATCACAAAACAAGTAGTAGATGCCGTCCCT
GAGCTGCGCAAATTTTCCGTCGGCACGCTTACCGTCTTCATTCAGCACAC
TTCTGCCTCTCTTTCTATCAACGAAAACGCCGACCCTACCGGTGAGCGAG
AAAGAATCAATCATGTACTGACTTGTATTTAAACATGAAATATTTTTTCC
GATAGCAAATATCACATCTCCTCAATGCCATGCATCACCAATCCACAAAA
CCAGTCCGCACAGACATGGAGAAAGCCCTGAACATGATCGTCCCTGATAG
CTGGGCGACGGGCGGCTTGCTGGATCACGTTGACGAAGGGCCTGACGATA
TTACGGGCCATGTGAAGGCAACCCTTGTAGGAGCAAATTTGACCATACCT
GTCATGAAGGGCCGACTAGCTCTCGGTACGTGGCAGGGTATCTATCTGTG
CGAGCATCGCAACGCGGGCGGTTATGGAGGAGGCCACGCGCGGCGCCTCA
TCATTACGATTCATGGTCTAGTGTGTTCTTGAGCGTTAGAGGAGGGGGCA
GCGGATCAGTACGGATTCGAGTGGGCAGGGAAAATGGTTGGATGACCGGT
GAGGCATAAGACGAACCACATAACATGAAACTTCAAGCCCCCCCGGGGGG
AT back to topCoding sequence (CDS) from alignment at scaffold_13:259658..260609- >mRNA_5367 ID=mRNA_5367|Name=jgi.p|Nanoce1779_2|64318|organism=Nannochloropsis oceanica|type=CDS|length=972bp|location=Sequence derived from alignment at scaffold_13:259658..260609- (Nannochloropsis oceanica) TCCGCACAGACATGGAGAAAGCCCTGAACATGATCGTCCCTGATAGCTGG GCGACGGGCGGCTTGCTGGATCACGTTGACGAAGGGCCTGACGATATTAC GGGCCATGTGAAGGCAACCCTTGTAGGAGCAAATTTGACCATACCTGTCA TGAAGGGCCGACTAGCTCTCGGTACGTGGCAGGGTATCTATCTGTGCGAG CATCGCAACGCGGGCGGTTATGGAGGAGGCCACGCGCGGCGCCTCATCAT TACGATTCATGGTCTAGTGTGTTCTTGAATGGCAAGCACGGGAATTTGCA AAGGCGAGACGGCATGGCTGCAGAAGACCATCACAGTGCAGGCTGAAGGG CGGGGATGTGAACTCATCACAAAACAAGTAGTAGATGCCGTCCCTGAGCT GCGCAAATTTTCCGTCGGCACGCTTACCGTCTTCATTCAGCACACTTCTG CCTCTCTTTCTATCAACGAAAACGCCGACCCTACCGTCCGCACAGACATG GAGAAAGCCCTGAACATGATCGTCCCTGATAGCTGGGCGACGGGCGGCTT GCTGGATCACGTTGACGAAGGGCCTGACGATATTACGGGCCATGTGAAGG CAACCCTTGTAGGAGCAAATTTGACCATACCTGTCATGAAGGGCCGACTA GCTCTCGGTACGTGGCAGGGTATCTATCTGTGCGAGCATCGCAACGCGGG CGGTTATGGAGGAGGCCACGCGCGGCGCCTCATCATTACGATTCATGGTC TAGTGTGTTCTTGAATGGCAAGCACGGGAATTTGCAAAGGCGAGACGGCA TGGCTGCAGAAGACCATCACAGTGCAGGCTGAAGGGCGGGGATGTGAACT CATCACAAAACAAGTAGTAGATGCCGTCCCTGAGCTGCGCAAATTTTCCG TCGGCACGCTTACCGTCTTCATTCAGCACACTTCTGCCTCTCTTTCTATC AACGAAAACGCCGACCCTACCG back to top
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