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Properties
| Property Name | Value |
|---|
| TranscriptId | 577675 |
| Track | FilteredModels2 |
| ProteinId | 577589 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_3 | supercontig | scaffold_3:1277807..1278910 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_528 ID=mRNA_528|Name=jgi.p|Nanoce1779_2|577589|organism=Nannochloropsis oceanica|type=mRNA|length=963bp
CAGGGTCGACGCAACAACCATACAACACAGGGTCGACGTTGAAAATGCCA
TGCTTCCTAGCACACGTTCTCGCAAGGCCTCCGCCCGTCAGAGAGAGGAA
CTGGAGGCTGCGAGGGAGGAGGAGGAGAAGGGTAATCTTGATCTGACGGG
TCAGACGGGTCCGAGCGGAGGCCTTGTATCAGGACCAGCAGCAGCAGCAG
CAGCAGGCAGCGGTGAAGCTTGTGATGGAGGTCGTAAAGGAGATCGTGGA
GGTGCGCGTGCGGGAGCCTGTGGAGGAGCCAGTGGAGGAGGGGAGGAGGC
GGCGGCTAGCCATAACGTCATTCGGCAGAATATTACCTCATATGAGGAGA
TTTTACCACCTCCCTTCGCCGCTACGCCTGGCCATCCTGCTGTAGCTCTT
GCACCTGGTGCTCCTGGACCTGGTGCTGCCGGTGATCCCAGTGCTCCTGC
TCTAACCGGGAGCCGAGGAGGCGGTGGGGGAGGCCGCGGTGGCCGTGCTG
GACGGCGTGGGTGCCTTACTGGAGGTGTCGCACTAGCAGCGATACGAGCC
CCGCCTCCAGCAGCAGAAGAGGATAAATATGCGGCCTGGGAGAAGAGGAT
GCTGCGGGAGACTGCAGCGGCTGAGAGAAAGAATGTAATTGCGGCCGAGA
ACATTGCGGCTGTCCCCGCAGAAATATCAAATTTAGAGGCGGAGATTAGG
GAGTTGAAGGAGATGATGCAGAACCTTGACAGGCGGCAACCAACAATAGC
GTGCGTCAGTACCTGCACCCTCCGCCACCTAAGTCCTCCTCCTCCTCCGC
TTCTAGCCACACGCCCCGCACGAAGGCCGTCCTCCAACGCATCCTTGTCC
AGAACATGATGGCCAGCGACGAGATCGGCTTGTTGATGGGCGCACCTGGC
TTTAGGAGGGTGGGAAGGGAGAACGATGATAGTCAGAAGGATGATGATGA
TGATGATGATGAT back to topprotein sequence of jgi.p|Nanoce1779_2|577589 >mRNA_528-protein ID=mRNA_528-protein|Name=jgi.p|Nanoce1779_2|577589|organism=Nannochloropsis oceanica|type=polypeptide|length=270bp
MLPSTRSRKASARQREELEAAREEEEKGNLDLTGQTGPSGGLVSGPAAAA
AAGSGEACDGGRKGDRGGARAGACGGASGGGEEAAASHNVIRQNITSYEE
ILPPPFAATPGHPAVALAPGAPGPGAAGDPSAPALTGSRGGGGGGRGGRA
GRRGCLTGGVALAAIRAPPPAAEEDKYAAWEKRMLRETAAAERKNVIAAE
NIAAVPAEISNLEAEIRELKEMMQNLDRRQPTIACVSTCTLRHLSPPPPP
LLATRPARRPSSNASLSRT* back to topmRNA from alignment at scaffold_3:1277807..1278910- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_528 ID=mRNA_528|Name=jgi.p|Nanoce1779_2|577589|organism=Nannochloropsis oceanica|type=mRNA|length=1104bp|location=Sequence derived from alignment at scaffold_3:1277807..1278910- (Nannochloropsis oceanica)
CAGGGTCGACGCAACAACCATACAACACAGGGTCGACGTTGAAAATGCCA
TGCTTCCTAGCACACGTTCTCGCAAGGCCTCCGCCCGTCAGAGAGAGGAA
CTGGAGGCTGCGAGGGAGGAGGAGGAGAAGGGTAATCTTGATCTGACGGG
TCAGACGGGTCCGAGCGGAGGCCTTGTATCAGGACCAGCAGCAGCAGCAG
CAGCAGGCAGCGGTGAAGCTTGTGATGGAGGTCGTAAAGGAGATCGTGGA
GGTGCGCGTGCGGGAGCCTGTGGAGGAGCCAGTGGAGGAGGGGAGGAGGC
GGCGGCTAGCCATAACGTCATTCGGCAGAATATTACCTCATATGAGGAGA
TTTTACCACCTCCCTTCGCCGCTACGCCTGGCCATCCTGCTGTAGCTCTT
GCACCTGGTGCTCCTGGACCTGGTGCTGCCGGTGATCCCAGTGCTCCTGC
TCTAACCGGGAGCCGAGGAGGCGGTGGGGGAGGCCGCGGTGGCCGTGCTG
GACGGCGTGGGTGCCTTACTGGAGGTGTCGCACTAGCAGCGATACGAGCC
CCGCCTCCAGCAGCAGAAGAGGATAAATATGCGGCCTGGGAGAAGAGGAT
GCTGCGGGAGACTGCAGCGGCTGAGAGAAAGAATGTAATTGCGGCCGAGA
ACATTGCGGCTGTCCCCGCAGAAATATCAAATTTAGAGGCGGAGATTAGG
GAGTTGAAGGAGATGATGCAGAACCTTGGTAAGTCGGGGGAGGATTGAAC
GGGAGGGAGGGAGGGGGGGAGCTGAGTCCTTTTCTCCATTGGCCCCATTG
TGCTGCCGCCTCCTGCTGGAGATGAGAAATGATATAAAAATTGAGACATC
TTTCTTCCCTCAACGTCAGACAGGCGGCAACCAACAATAGCGTGCGTCAG
TACCTGCACCCTCCGCCACCTAAGTCCTCCTCCTCCTCCGCTTCTAGCCA
CACGCCCCGCACGAAGGCCGTCCTCCAACGCATCCTTGTCCAGAACATGA
TGGCCAGCGACGAGATCGGCTTGTTGATGGGCGCACCTGGCTTTAGGAGG
GTGGGAAGGGAGAACGATGATAGTCAGAAGGATGATGATGATGATGATGA
TGAT back to topCoding sequence (CDS) from alignment at scaffold_3:1277807..1278910- >mRNA_528 ID=mRNA_528|Name=jgi.p|Nanoce1779_2|577589|organism=Nannochloropsis oceanica|type=CDS|length=1620bp|location=Sequence derived from alignment at scaffold_3:1277807..1278910- (Nannochloropsis oceanica)
GACAGGCGGCAACCAACAATAGCGTGCGTCAGTACCTGCACCCTCCGCCA
CCTAAGTCCTCCTCCTCCTCCGCTTCTAGCCACACGCCCCGCACGAAGGC
CGTCCTCCAACGCATCCTTGTCCAGAACATGAATGCTTCCTAGCACACGT
TCTCGCAAGGCCTCCGCCCGTCAGAGAGAGGAACTGGAGGCTGCGAGGGA
GGAGGAGGAGAAGGGTAATCTTGATCTGACGGGTCAGACGGGTCCGAGCG
GAGGCCTTGTATCAGGACCAGCAGCAGCAGCAGCAGCAGGCAGCGGTGAA
GCTTGTGATGGAGGTCGTAAAGGAGATCGTGGAGGTGCGCGTGCGGGAGC
CTGTGGAGGAGCCAGTGGAGGAGGGGAGGAGGCGGCGGCTAGCCATAACG
TCATTCGGCAGAATATTACCTCATATGAGGAGATTTTACCACCTCCCTTC
GCCGCTACGCCTGGCCATCCTGCTGTAGCTCTTGCACCTGGTGCTCCTGG
ACCTGGTGCTGCCGGTGATCCCAGTGCTCCTGCTCTAACCGGGAGCCGAG
GAGGCGGTGGGGGAGGCCGCGGTGGCCGTGCTGGACGGCGTGGGTGCCTT
ACTGGAGGTGTCGCACTAGCAGCGATACGAGCCCCGCCTCCAGCAGCAGA
AGAGGATAAATATGCGGCCTGGGAGAAGAGGATGCTGCGGGAGACTGCAG
CGGCTGAGAGAAAGAATGTAATTGCGGCCGAGAACATTGCGGCTGTCCCC
GCAGAAATATCAAATTTAGAGGCGGAGATTAGGGAGTTGAAGGAGATGAT
GCAGAACCTTGACAGGCGGCAACCAACAATAGCGTGCGTCAGTACCTGCA
CCCTCCGCCACCTAAGTCCTCCTCCTCCTCCGCTTCTAGCCACACGCCCC
GCACGAAGGCCGTCCTCCAACGCATCCTTGTCCAGAACATGAATGCTTCC
TAGCACACGTTCTCGCAAGGCCTCCGCCCGTCAGAGAGAGGAACTGGAGG
CTGCGAGGGAGGAGGAGGAGAAGGGTAATCTTGATCTGACGGGTCAGACG
GGTCCGAGCGGAGGCCTTGTATCAGGACCAGCAGCAGCAGCAGCAGCAGG
CAGCGGTGAAGCTTGTGATGGAGGTCGTAAAGGAGATCGTGGAGGTGCGC
GTGCGGGAGCCTGTGGAGGAGCCAGTGGAGGAGGGGAGGAGGCGGCGGCT
AGCCATAACGTCATTCGGCAGAATATTACCTCATATGAGGAGATTTTACC
ACCTCCCTTCGCCGCTACGCCTGGCCATCCTGCTGTAGCTCTTGCACCTG
GTGCTCCTGGACCTGGTGCTGCCGGTGATCCCAGTGCTCCTGCTCTAACC
GGGAGCCGAGGAGGCGGTGGGGGAGGCCGCGGTGGCCGTGCTGGACGGCG
TGGGTGCCTTACTGGAGGTGTCGCACTAGCAGCGATACGAGCCCCGCCTC
CAGCAGCAGAAGAGGATAAATATGCGGCCTGGGAGAAGAGGATGCTGCGG
GAGACTGCAGCGGCTGAGAGAAAGAATGTAATTGCGGCCGAGAACATTGC
GGCTGTCCCCGCAGAAATATCAAATTTAGAGGCGGAGATTAGGGAGTTGA
AGGAGATGATGCAGAACCTT back to top
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