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Properties
| Property Name | Value |
|---|
| TranscriptId | 591783 |
| Track | FilteredModels2 |
| ProteinId | 591697 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_12 | supercontig | scaffold_12:704114..705567 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_5193 ID=mRNA_5193|Name=jgi.p|Nanoce1779_2|591697|organism=Nannochloropsis oceanica|type=mRNA|length=1454bp
GAAGAGAGGGAGAAAGGAGTCCCAGAAGAGGATTTGGGGGGGAAGGGAGT
CCTAGAGGAGAAGGAGGAGAGGGAGGAGGGTTTGCGTCTCAGGATAAAGA
GGACTACCCGCCTAAGATAATGGAGGACCGAGATTTGAGGAAGCTGGTGG
AAAATAACCCGCGGTGCGCGGACTGTGAGGCACCGCACCCGGATTGGGTT
TCATTGAATCTGGGAGTTGTAATTTGTTTGCAATGCTCGGGGGTCCACCG
CTCCCTGGGTGTGCATGTGAGTAAGGTGAGGAGTCTTGCCCTGGACCAAA
TGGATGAGACGGACCTGGCGGTATTGGCGAAGCTGGGAAATGCGAGTGTG
AATCGTGTGTACGAACATAAGCTTTTGGACGGGTGGCAGAAGCCTTCCCC
TGACGAGCCGCGGTTGAAGAGGGAGCAGTTTGTCAAGGCGAAGTATGTGT
GGAAGGGCTTTACGCCTTTGATGAATGGGGAGAAAGGAGCTTTGAAAAGA
GAAGGGGAAGGAGACAGAGTTGCAGAAGGAGGAAGTGGCAATTATGGACA
AGCACAGCAAGTCCAGCTAGCGTCACAAGCGCTTGTCGATGCGGTTCTTT
GCAACGACTTGGGTGCGGCCCTCGCGGCTTTAGTGCAAGGAGCGGACATT
CACTGGACGGGTGGAAACGGAAATGAAAAGCGACAGACAGCTCTGCACCT
GGCCGCGCAAAGCGGGGATGCCGTTGTGGAAGCTGTGGCTTTTCTCGTCC
AGAACGGAGCAAATGTGTCGGTGCGAGATGGAGAGGATTTGACTGCGTTG
GACTTGGCGACAAAGGGCCATCATGCGCAGACTGTACGGTACTTGCTGAA
GTTTTGACAACGGTGTGGTGTATCACCAGTACGTCAGGTAGTTTAGTGGA
GATGCAGGATATATGAAGGGTCACAGGGAAATCCACCCTTACCGATGAAT
GAGAAAATGATGACAATGAATCATAAATTAGAGAAGATCATTCATGCAAG
TAAGTAAGCAAGCAAGCAAGCAAGCATGCAAGCAAGCAAGCAAGAGCAGG
AAGCTCGGATCGGCCCACGCAGGCATGCAGGGATCTGCTTTTGTGAGTAA
TTCGAAGTAGCCATATGCTTAGAAGGTTACTAAGCACCAGCAACAACATT
ATTGAGGCTCATCCAAAAAGTGAATAGCGTGCCCAGCCTCTCACAACTCA
GGTTTCGCCTTTTTCCATGACTTCGATTTCTCTGGGTGGGAGGAGGAGGT
AGGCTCTGCGCGCAACGGCTTTCGTTGAATCGAAGATCGCAGGAGCAAAA
GAGCAAATTAAGAATCTCTGCCAATGCCACGACGACGACAACGAGGAGGA
TGTGGAGGAGGGGGATGAGGACAAGGGCGAGTACTTTCTTGCGCGGACGA
TCGCCCAAGCTTTCGAGCGACGTGAAACAAAAAGTTTAGATGACCAATGA
GACC back to topprotein sequence of jgi.p|Nanoce1779_2|591697 >mRNA_5193-protein ID=mRNA_5193-protein|Name=jgi.p|Nanoce1779_2|591697|organism=Nannochloropsis oceanica|type=polypeptide|length=246bp
MEDRDLRKLVENNPRCADCEAPHPDWVSLNLGVVICLQCSGVHRSLGVHV
SKVRSLALDQMDETDLAVLAKLGNASVNRVYEHKLLDGWQKPSPDEPRLK
REQFVKAKYVWKGFTPLMNGEKGALKREGEGDRVAEGGSGNYGQAQQVQL
ASQALVDAVLCNDLGAALAALVQGADIHWTGGNGNEKRQTALHLAAQSGD
AVVEAVAFLVQNGANVSVRDGEDLTALDLATKGHHAQTVRYLLKF* back to topmRNA from alignment at scaffold_12:704114..705567- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_5193 ID=mRNA_5193|Name=jgi.p|Nanoce1779_2|591697|organism=Nannochloropsis oceanica|type=mRNA|length=1454bp|location=Sequence derived from alignment at scaffold_12:704114..705567- (Nannochloropsis oceanica)
GAAGAGAGGGAGAAAGGAGTCCCAGAAGAGGATTTGGGGGGGAAGGGAGT
CCTAGAGGAGAAGGAGGAGAGGGAGGAGGGTTTGCGTCTCAGGATAAAGA
GGACTACCCGCCTAAGATAATGGAGGACCGAGATTTGAGGAAGCTGGTGG
AAAATAACCCGCGGTGCGCGGACTGTGAGGCACCGCACCCGGATTGGGTT
TCATTGAATCTGGGAGTTGTAATTTGTTTGCAATGCTCGGGGGTCCACCG
CTCCCTGGGTGTGCATGTGAGTAAGGTGAGGAGTCTTGCCCTGGACCAAA
TGGATGAGACGGACCTGGCGGTATTGGCGAAGCTGGGAAATGCGAGTGTG
AATCGTGTGTACGAACATAAGCTTTTGGACGGGTGGCAGAAGCCTTCCCC
TGACGAGCCGCGGTTGAAGAGGGAGCAGTTTGTCAAGGCGAAGTATGTGT
GGAAGGGCTTTACGCCTTTGATGAATGGGGAGAAAGGAGCTTTGAAAAGA
GAAGGGGAAGGAGACAGAGTTGCAGAAGGAGGAAGTGGCAATTATGGACA
AGCACAGCAAGTCCAGCTAGCGTCACAAGCGCTTGTCGATGCGGTTCTTT
GCAACGACTTGGGTGCGGCCCTCGCGGCTTTAGTGCAAGGAGCGGACATT
CACTGGACGGGTGGAAACGGAAATGAAAAGCGACAGACAGCTCTGCACCT
GGCCGCGCAAAGCGGGGATGCCGTTGTGGAAGCTGTGGCTTTTCTCGTCC
AGAACGGAGCAAATGTGTCGGTGCGAGATGGAGAGGATTTGACTGCGTTG
GACTTGGCGACAAAGGGCCATCATGCGCAGACTGTACGGTACTTGCTGAA
GTTTTGACAACGGTGTGGTGTATCACCAGTACGTCAGGTAGTTTAGTGGA
GATGCAGGATATATGAAGGGTCACAGGGAAATCCACCCTTACCGATGAAT
GAGAAAATGATGACAATGAATCATAAATTAGAGAAGATCATTCATGCAAG
TAAGTAAGCAAGCAAGCAAGCAAGCATGCAAGCAAGCAAGCAAGAGCAGG
AAGCTCGGATCGGCCCACGCAGGCATGCAGGGATCTGCTTTTGTGAGTAA
TTCGAAGTAGCCATATGCTTAGAAGGTTACTAAGCACCAGCAACAACATT
ATTGAGGCTCATCCAAAAAGTGAATAGCGTGCCCAGCCTCTCACAACTCA
GGTTTCGCCTTTTTCCATGACTTCGATTTCTCTGGGTGGGAGGAGGAGGT
AGGCTCTGCGCGCAACGGCTTTCGTTGAATCGAAGATCGCAGGAGCAAAA
GAGCAAATTAAGAATCTCTGCCAATGCCACGACGACGACAACGAGGAGGA
TGTGGAGGAGGGGGATGAGGACAAGGGCGAGTACTTTCTTGCGCGGACGA
TCGCCCAAGCTTTCGAGCGACGTGAAACAAAAAGTTTAGATGACCAATGA
GACC back to topCoding sequence (CDS) from alignment at scaffold_12:704114..705567- >mRNA_5193 ID=mRNA_5193|Name=jgi.p|Nanoce1779_2|591697|organism=Nannochloropsis oceanica|type=CDS|length=738bp|location=Sequence derived from alignment at scaffold_12:704114..705567- (Nannochloropsis oceanica)
ATGGAGGACCGAGATTTGAGGAAGCTGGTGGAAAATAACCCGCGGTGCGC
GGACTGTGAGGCACCGCACCCGGATTGGGTTTCATTGAATCTGGGAGTTG
TAATTTGTTTGCAATGCTCGGGGGTCCACCGCTCCCTGGGTGTGCATGTG
AGTAAGGTGAGGAGTCTTGCCCTGGACCAAATGGATGAGACGGACCTGGC
GGTATTGGCGAAGCTGGGAAATGCGAGTGTGAATCGTGTGTACGAACATA
AGCTTTTGGACGGGTGGCAGAAGCCTTCCCCTGACGAGCCGCGGTTGAAG
AGGGAGCAGTTTGTCAAGGCGAAGTATGTGTGGAAGGGCTTTACGCCTTT
GATGAATGGGGAGAAAGGAGCTTTGAAAAGAGAAGGGGAAGGAGACAGAG
TTGCAGAAGGAGGAAGTGGCAATTATGGACAAGCACAGCAAGTCCAGCTA
GCGTCACAAGCGCTTGTCGATGCGGTTCTTTGCAACGACTTGGGTGCGGC
CCTCGCGGCTTTAGTGCAAGGAGCGGACATTCACTGGACGGGTGGAAACG
GAAATGAAAAGCGACAGACAGCTCTGCACCTGGCCGCGCAAAGCGGGGAT
GCCGTTGTGGAAGCTGTGGCTTTTCTCGTCCAGAACGGAGCAAATGTGTC
GGTGCGAGATGGAGAGGATTTGACTGCGTTGGACTTGGCGACAAAGGGCC
ATCATGCGCAGACTGTACGGTACTTGCTGAAGTTTTGA back to top
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