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Properties
Property Name | Value |
TranscriptId | 591778 |
Track | FilteredModels2 |
ProteinId | 591692 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_12 | supercontig | scaffold_12:700573..701513 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_5191 ID=mRNA_5191|Name=jgi.p|Nanoce1779_2|591692|organism=Nannochloropsis oceanica|type=mRNA|length=941bp ACAGCCGTCCGTCTTTCCATCTATTTTATCTGAAATGGCTCGCCTTTCGC TTGTTGCCTGTGGCGTAGTTGTCATGGCCACGGTCACTCACGGCTTTGTT GTCCCGGCTCCCCGCACTTACTCCCGCGGCCGCATCGCCATGGCTGCCAA GAAGGACTTCTGGATTGCGCCCTCCATCCTCTCTGCTGACTTTGCCAAGC TTGGGCAAGAAGTGGACAACGTCCTGGCCGCTGGTGCTGACATCGTGCAC TTCGATGTGATGGACAACCACTACGTCCCCAACTTGACGATCGGCCCCAT GGTCTGCAAGGCCCTGCGCGACCACGGCGTCACCGCCCCCATTGACGTGC ACTTGATGGTTTCCCCCGTTGACCGTATCATCCCTGATTTTGCTGATGCC GGCGCTTCCTTCATCACCTTCCACCCGGAAGCTACCAACCACATTGACCG AACCCTGCAACTTATCAAGAGCAAAGGGTGCAAGGCTGGCTTGGTCTTCA ACCCCGCTACCCCCCTCACCATGGCCAAGCACGTCCTGGACAAAATCGAC ATCATTCTTCTCATGTCTGTGAACCCCGGTTTTGGTGGGCAATCCTTCAT TCCCGAGACCCTGGTCAAGCTGCGTGAGGCCCGTAAAATGATCGACGAGT CCGGGTATGATATCCGCCTGGAGGTCGATGGTGGGGTTGGCGTGGCCAAC ATCAAGGAGATTGCCGAAGCAGGCGCTGATTTCTTTGTGGCGGGGAGTGC TATCTTGAAGAACCCCCGCACCCAGGATGCCTACAAGGGGACGATTGACC AGATGCGTGCCGAGCTGGCGAAGGTGAGCAAGTAGAGGGAAGGGTAGGCT TTACGGATATGTATCACCAGAAACGGTAGGACGAAAGGGTATAAGATAAA TGAATGAATAATTTGATTTTTGTGCGTTTGCGTGGGTGGGG back to topprotein sequence of jgi.p|Nanoce1779_2|591692 >mRNA_5191-protein ID=mRNA_5191-protein|Name=jgi.p|Nanoce1779_2|591692|organism=Nannochloropsis oceanica|type=polypeptide|length=267bp MARLSLVACGVVVMATVTHGFVVPAPRTYSRGRIAMAAKKDFWIAPSILS ADFAKLGQEVDNVLAAGADIVHFDVMDNHYVPNLTIGPMVCKALRDHGVT APIDVHLMVSPVDRIIPDFADAGASFITFHPEATNHIDRTLQLIKSKGCK AGLVFNPATPLTMAKHVLDKIDIILLMSVNPGFGGQSFIPETLVKLREAR KMIDESGYDIRLEVDGGVGVANIKEIAEAGADFFVAGSAILKNPRTQDAY KGTIDQMRAELAKVSK* back to topmRNA from alignment at scaffold_12:700573..701513+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_5191 ID=mRNA_5191|Name=jgi.p|Nanoce1779_2|591692|organism=Nannochloropsis oceanica|type=mRNA|length=941bp|location=Sequence derived from alignment at scaffold_12:700573..701513+ (Nannochloropsis oceanica) ACAGCCGTCCGTCTTTCCATCTATTTTATCTGAAATGGCTCGCCTTTCGC
TTGTTGCCTGTGGCGTAGTTGTCATGGCCACGGTCACTCACGGCTTTGTT
GTCCCGGCTCCCCGCACTTACTCCCGCGGCCGCATCGCCATGGCTGCCAA
GAAGGACTTCTGGATTGCGCCCTCCATCCTCTCTGCTGACTTTGCCAAGC
TTGGGCAAGAAGTGGACAACGTCCTGGCCGCTGGTGCTGACATCGTGCAC
TTCGATGTGATGGACAACCACTACGTCCCCAACTTGACGATCGGCCCCAT
GGTCTGCAAGGCCCTGCGCGACCACGGCGTCACCGCCCCCATTGACGTGC
ACTTGATGGTTTCCCCCGTTGACCGTATCATCCCTGATTTTGCTGATGCC
GGCGCTTCCTTCATCACCTTCCACCCGGAAGCTACCAACCACATTGACCG
AACCCTGCAACTTATCAAGAGCAAAGGGTGCAAGGCTGGCTTGGTCTTCA
ACCCCGCTACCCCCCTCACCATGGCCAAGCACGTCCTGGACAAAATCGAC
ATCATTCTTCTCATGTCTGTGAACCCCGGTTTTGGTGGGCAATCCTTCAT
TCCCGAGACCCTGGTCAAGCTGCGTGAGGCCCGTAAAATGATCGACGAGT
CCGGGTATGATATCCGCCTGGAGGTCGATGGTGGGGTTGGCGTGGCCAAC
ATCAAGGAGATTGCCGAAGCAGGCGCTGATTTCTTTGTGGCGGGGAGTGC
TATCTTGAAGAACCCCCGCACCCAGGATGCCTACAAGGGGACGATTGACC
AGATGCGTGCCGAGCTGGCGAAGGTGAGCAAGTAGAGGGAAGGGTAGGCT
TTACGGATATGTATCACCAGAAACGGTAGGACGAAAGGGTATAAGATAAA
TGAATGAATAATTTGATTTTTGTGCGTTTGCGTGGGTGGGG back to topCoding sequence (CDS) from alignment at scaffold_12:700573..701513+ >mRNA_5191 ID=mRNA_5191|Name=jgi.p|Nanoce1779_2|591692|organism=Nannochloropsis oceanica|type=CDS|length=801bp|location=Sequence derived from alignment at scaffold_12:700573..701513+ (Nannochloropsis oceanica) ATGGCTCGCCTTTCGCTTGTTGCCTGTGGCGTAGTTGTCATGGCCACGGT CACTCACGGCTTTGTTGTCCCGGCTCCCCGCACTTACTCCCGCGGCCGCA TCGCCATGGCTGCCAAGAAGGACTTCTGGATTGCGCCCTCCATCCTCTCT GCTGACTTTGCCAAGCTTGGGCAAGAAGTGGACAACGTCCTGGCCGCTGG TGCTGACATCGTGCACTTCGATGTGATGGACAACCACTACGTCCCCAACT TGACGATCGGCCCCATGGTCTGCAAGGCCCTGCGCGACCACGGCGTCACC GCCCCCATTGACGTGCACTTGATGGTTTCCCCCGTTGACCGTATCATCCC TGATTTTGCTGATGCCGGCGCTTCCTTCATCACCTTCCACCCGGAAGCTA CCAACCACATTGACCGAACCCTGCAACTTATCAAGAGCAAAGGGTGCAAG GCTGGCTTGGTCTTCAACCCCGCTACCCCCCTCACCATGGCCAAGCACGT CCTGGACAAAATCGACATCATTCTTCTCATGTCTGTGAACCCCGGTTTTG GTGGGCAATCCTTCATTCCCGAGACCCTGGTCAAGCTGCGTGAGGCCCGT AAAATGATCGACGAGTCCGGGTATGATATCCGCCTGGAGGTCGATGGTGG GGTTGGCGTGGCCAACATCAAGGAGATTGCCGAAGCAGGCGCTGATTTCT TTGTGGCGGGGAGTGCTATCTTGAAGAACCCCCGCACCCAGGATGCCTAC AAGGGGACGATTGACCAGATGCGTGCCGAGCTGGCGAAGGTGAGCAAGTA G back to top
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