Properties
| Property Name | Value |
|---|
| TranscriptId | 591661 |
| Track | FilteredModels2 |
| ProteinId | 591575 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_12 | supercontig | scaffold_12:601374..602663 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_5157 ID=mRNA_5157|Name=jgi.p|Nanoce1779_2|591575|organism=Nannochloropsis oceanica|type=mRNA|length=1290bp
GGAGGGACGGCGGCAAGCATGGGGGCAGGTAATAGTTCGGACAAGGCGGT
TGTGGAAGGAGGAGGAGGAGGAGGGGGAAAGCTTGGTGTGGGAAAGAAGA
AGACTACTTGGCATGATGGGACAGGAAGAGTGAGTAAATCGGCGATGGAG
GCATTGGATCGATCGAAGCGGGTGGAGAGCCCGAATAGCTCGAAAGAAGA
CATTCAGAACGCAGCACTTAGGGAGATGCAAGCGACGTACTTGCCGTCCA
CGGGCGAGGTTCCCCAGTGGGAAGAAGACGATGCCCCCCACTTTCTCGAG
GATTCTACCCCGTCGTCAACTTCTTCCTCCACCTCTTCCTCCTCATTCTT
CTCGAAGCTTTTCGCCCAAGTCACGGGCAATGCTGTCTTGTCCTCGACAG
ACTTAGACCCCATCCTCGAAGAAATGCGTACTATACTCATCACCAAGAAC
GTCGCCTCCGAGATCGCGCATGACATCATCGATTCGGTCCGTTCGTCCCT
TGTCGGTCAAAAACTCCCATCGTTGACACGTGTCAAAACGGTGGTAAGGG
AAGCTTTAGAAAAGGCGATTGTGCGTGTATTGACCCCAAAAAAATCAACG
GATATCCTAAGGGAGGTCATGGGCGCGAAGGCGGAGGGAAGGCCGTACAC
AATCGTATTTGTAGGGATCAATGGAGTGGGGAAATCAACGAGTTTGTCCA
AGATCTGCTATTACTTGAAGAGGCATGGCTTAAAAGTGTTGATTGCGGCA
TGTGACACCTTCCGGTCGGGGGCAGTGGAGCAGCTGAAGGTCCATGCCCG
GTGCTTGGAGGTGGAGTTGTTCGACAAGGGATACCACAAGGACCCGGCCG
CCGTGGCCAAGGACGCGATCAAGGAGGGGAGGGAAGGAGGATATGACGTA
GTGCTGGTGGATACCGCTGGGAGGATGCAGAACAAGGAGCCGTTGATGCG
GGCGTTGGCCAAGTTGGTGTCGGACAATGAGCCTGATTTGGTGTTATTTG
TAGGCGAGGCTCTGGTAGGGAACGATGGGATTGACCAGCTCTCTATGTTT
AACCGGGCCTTGGCGAATTACTCGCCACCGGGTAAGATGCACCAGATCGA
CGGAATCATGCTCACCAAATTCGACACGGTGGACGAGAAGGTGGGGGCGG
CGCTGTCGATGAGCTACAAGACGGGACAACCGATTATGTTCGTGGGCACA
GGCCAGAAATATACGCATTTGAAGAAGCTGAATGTGAACATGATTTTGAA
TTGCTTGTTCAGGTAGGGAAAGAGCGGGGGAGTAGACGAG back to topprotein sequence of jgi.p|Nanoce1779_2|591575 >mRNA_5157-protein ID=mRNA_5157-protein|Name=jgi.p|Nanoce1779_2|591575|organism=Nannochloropsis oceanica|type=polypeptide|length=416bp
MGAGNSSDKAVVEGGGGGGGKLGVGKKKTTWHDGTGRVSKSAMEALDRSK
RVESPNSSKEDIQNAALREMQATYLPSTGEVPQWEEDDAPHFLEDSTPSS
TSSSTSSSSFFSKLFAQVTGNAVLSSTDLDPILEEMRTILITKNVASEIA
HDIIDSVRSSLVGQKLPSLTRVKTVVREALEKAIVRVLTPKKSTDILREV
MGAKAEGRPYTIVFVGINGVGKSTSLSKICYYLKRHGLKVLIAACDTFRS
GAVEQLKVHARCLEVELFDKGYHKDPAAVAKDAIKEGREGGYDVVLVDTA
GRMQNKEPLMRALAKLVSDNEPDLVLFVGEALVGNDGIDQLSMFNRALAN
YSPPGKMHQIDGIMLTKFDTVDEKVGAALSMSYKTGQPIMFVGTGQKYTH
LKKLNVNMILNCLFR* back to topmRNA from alignment at scaffold_12:601374..602663- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_5157 ID=mRNA_5157|Name=jgi.p|Nanoce1779_2|591575|organism=Nannochloropsis oceanica|type=mRNA|length=1290bp|location=Sequence derived from alignment at scaffold_12:601374..602663- (Nannochloropsis oceanica)
GGAGGGACGGCGGCAAGCATGGGGGCAGGTAATAGTTCGGACAAGGCGGT
TGTGGAAGGAGGAGGAGGAGGAGGGGGAAAGCTTGGTGTGGGAAAGAAGA
AGACTACTTGGCATGATGGGACAGGAAGAGTGAGTAAATCGGCGATGGAG
GCATTGGATCGATCGAAGCGGGTGGAGAGCCCGAATAGCTCGAAAGAAGA
CATTCAGAACGCAGCACTTAGGGAGATGCAAGCGACGTACTTGCCGTCCA
CGGGCGAGGTTCCCCAGTGGGAAGAAGACGATGCCCCCCACTTTCTCGAG
GATTCTACCCCGTCGTCAACTTCTTCCTCCACCTCTTCCTCCTCATTCTT
CTCGAAGCTTTTCGCCCAAGTCACGGGCAATGCTGTCTTGTCCTCGACAG
ACTTAGACCCCATCCTCGAAGAAATGCGTACTATACTCATCACCAAGAAC
GTCGCCTCCGAGATCGCGCATGACATCATCGATTCGGTCCGTTCGTCCCT
TGTCGGTCAAAAACTCCCATCGTTGACACGTGTCAAAACGGTGGTAAGGG
AAGCTTTAGAAAAGGCGATTGTGCGTGTATTGACCCCAAAAAAATCAACG
GATATCCTAAGGGAGGTCATGGGCGCGAAGGCGGAGGGAAGGCCGTACAC
AATCGTATTTGTAGGGATCAATGGAGTGGGGAAATCAACGAGTTTGTCCA
AGATCTGCTATTACTTGAAGAGGCATGGCTTAAAAGTGTTGATTGCGGCA
TGTGACACCTTCCGGTCGGGGGCAGTGGAGCAGCTGAAGGTCCATGCCCG
GTGCTTGGAGGTGGAGTTGTTCGACAAGGGATACCACAAGGACCCGGCCG
CCGTGGCCAAGGACGCGATCAAGGAGGGGAGGGAAGGAGGATATGACGTA
GTGCTGGTGGATACCGCTGGGAGGATGCAGAACAAGGAGCCGTTGATGCG
GGCGTTGGCCAAGTTGGTGTCGGACAATGAGCCTGATTTGGTGTTATTTG
TAGGCGAGGCTCTGGTAGGGAACGATGGGATTGACCAGCTCTCTATGTTT
AACCGGGCCTTGGCGAATTACTCGCCACCGGGTAAGATGCACCAGATCGA
CGGAATCATGCTCACCAAATTCGACACGGTGGACGAGAAGGTGGGGGCGG
CGCTGTCGATGAGCTACAAGACGGGACAACCGATTATGTTCGTGGGCACA
GGCCAGAAATATACGCATTTGAAGAAGCTGAATGTGAACATGATTTTGAA
TTGCTTGTTCAGGTAGGGAAAGAGCGGGGGAGTAGACGAG back to topCoding sequence (CDS) from alignment at scaffold_12:601374..602663- >mRNA_5157 ID=mRNA_5157|Name=jgi.p|Nanoce1779_2|591575|organism=Nannochloropsis oceanica|type=CDS|length=1248bp|location=Sequence derived from alignment at scaffold_12:601374..602663- (Nannochloropsis oceanica)
ATGGGGGCAGGTAATAGTTCGGACAAGGCGGTTGTGGAAGGAGGAGGAGG
AGGAGGGGGAAAGCTTGGTGTGGGAAAGAAGAAGACTACTTGGCATGATG
GGACAGGAAGAGTGAGTAAATCGGCGATGGAGGCATTGGATCGATCGAAG
CGGGTGGAGAGCCCGAATAGCTCGAAAGAAGACATTCAGAACGCAGCACT
TAGGGAGATGCAAGCGACGTACTTGCCGTCCACGGGCGAGGTTCCCCAGT
GGGAAGAAGACGATGCCCCCCACTTTCTCGAGGATTCTACCCCGTCGTCA
ACTTCTTCCTCCACCTCTTCCTCCTCATTCTTCTCGAAGCTTTTCGCCCA
AGTCACGGGCAATGCTGTCTTGTCCTCGACAGACTTAGACCCCATCCTCG
AAGAAATGCGTACTATACTCATCACCAAGAACGTCGCCTCCGAGATCGCG
CATGACATCATCGATTCGGTCCGTTCGTCCCTTGTCGGTCAAAAACTCCC
ATCGTTGACACGTGTCAAAACGGTGGTAAGGGAAGCTTTAGAAAAGGCGA
TTGTGCGTGTATTGACCCCAAAAAAATCAACGGATATCCTAAGGGAGGTC
ATGGGCGCGAAGGCGGAGGGAAGGCCGTACACAATCGTATTTGTAGGGAT
CAATGGAGTGGGGAAATCAACGAGTTTGTCCAAGATCTGCTATTACTTGA
AGAGGCATGGCTTAAAAGTGTTGATTGCGGCATGTGACACCTTCCGGTCG
GGGGCAGTGGAGCAGCTGAAGGTCCATGCCCGGTGCTTGGAGGTGGAGTT
GTTCGACAAGGGATACCACAAGGACCCGGCCGCCGTGGCCAAGGACGCGA
TCAAGGAGGGGAGGGAAGGAGGATATGACGTAGTGCTGGTGGATACCGCT
GGGAGGATGCAGAACAAGGAGCCGTTGATGCGGGCGTTGGCCAAGTTGGT
GTCGGACAATGAGCCTGATTTGGTGTTATTTGTAGGCGAGGCTCTGGTAG
GGAACGATGGGATTGACCAGCTCTCTATGTTTAACCGGGCCTTGGCGAAT
TACTCGCCACCGGGTAAGATGCACCAGATCGACGGAATCATGCTCACCAA
ATTCGACACGGTGGACGAGAAGGTGGGGGCGGCGCTGTCGATGAGCTACA
AGACGGGACAACCGATTATGTTCGTGGGCACAGGCCAGAAATATACGCAT
TTGAAGAAGCTGAATGTGAACATGATTTTGAATTGCTTGTTCAGGTAG back to top
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