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Properties
| Property Name | Value |
|---|
| TranscriptId | 591606 |
| Track | FilteredModels2 |
| ProteinId | 591520 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_12 | supercontig | scaffold_12:562610..564106 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_5141 ID=mRNA_5141|Name=jgi.p|Nanoce1779_2|591520|organism=Nannochloropsis oceanica|type=mRNA|length=1497bp
GGAGGGCCTCGGTACTACTTGCGGAGTGCGGAGAAGAAGGCGAGGGAGTT
GGCGATCGCAAAGAAAGAGGAGGAGGCGGCGGCAAGACGGGCAGCGGCGG
CTCGTGCTCTGGCTGCGGCCAGACGAAGCCCGCGGCTTGCGTCTCTGAGC
AAAAGCCCCACAAGCAGTGCAATGAGCGTAGTTGCATCGTCTGCTTCTAC
AACGACCATGCCGTCCTCTTCCCCCTCGGTGGTGGCGTCGACCGTCCAAA
CTCCCGTGAGCAACACGCGGAAGTCCCCCCGCATCGCGCGGATGGCGTTG
GAACGAGAGGGTGGGAGTGTGCGGCATGGGCCAGGACGAGGCGGTTTGTT
TGCGTCTGATGTAGAGGCGGAGGCCGAAAACGGAGGTAGGGAGGGACCCG
TGTGTCGACCGATCCCCGCGGTGGGGTCCGATGAATACGCAAAGACACCA
AGCTTTATTCAGATGCAAGTGACCAGAGAGATGTTGAATGGGGCGATTGG
CGCGTTTAATGCCTATGTGCGGGAGAGGACAGGAGGGAGGAACGGGGAGA
TGGACGCCTTGCCTTTGGATAGGGTGACGGAGGTGATTGCACAGGGGGAT
GCGGGCAAGACGGTATTGCTCTCTCTCATTCATTTGAAGCGGGTGGGTAT
CTCTGTGACAGCGCAGGGGCAGAAGGCGTACAAAATTTGGAAGTAAGGGA
GGGAGAGAGAAAGGGAGAAAAGTAGAGAGAGAGAACGAGAGAGAGAGAGA
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
GCGAGTGAATGAGAGAGTGTGTGTGTGAAAATGAGAGATGCGAAGCAGCT
AGCACGATTCATTCGAATTGAAAAAAAAAAGAACTAAATGGCAAAGGAAG
ACAGCCGAGTGTTTTCATCCAGAAAGCTTTGTCCGAGCAGAGGGGAGGCC
GTAGCTTGTCTGTCTGTCTCTGTTTGTTAGCGTGTGGGCATATGTCCCTC
TTGTGCGGACGAAAAATATGATGGAAAGCGAAAAATAAAGCTGAAGATAA
TGATACACAGGGGTGACTTTCACGAGATAAGCCAAAATTTTCGTTTAGCT
GGTATGCACACCAGTGGAACAAAAAAAGTAATGCAAACTCAACATTTTCA
TCCACTTTACTCGTATCAAAGCCAAAAAAATGTGCTAGAGCTACCTCCCG
AGGTCTACTGCCACTTCTTTTTGTGCCGAGACCGTTGATCCTTCTCCAAT
TCCGTGGCAGGAAATGTGCCAGGAGCGCGGATACTCTCCCAGGGCCATCA
CTTTGTCTTCTTCTTCCCCTCCAACTGGCTCGCCCCCAGGTGGCCCACCA
CATACAGGGGCATGAAAAAACAAACCACCTTCCTGGATATCCCCCTACGC
CAGCAACACCAACGCAGGCCCGGGGCAGAGCCCTATCATTCCCCACCCGA
TCCCAAACACGGCCTCGCCCACCACAAGCTTCAGTCAACCTAAGGCT back to topprotein sequence of jgi.p|Nanoce1779_2|591520 >mRNA_5141-protein ID=mRNA_5141-protein|Name=jgi.p|Nanoce1779_2|591520|organism=Nannochloropsis oceanica|type=polypeptide|length=175bp
MSVVASSASTTTMPSSSPSVVASTVQTPVSNTRKSPRIARMALEREGGSV
RHGPGRGGLFASDVEAEAENGGREGPVCRPIPAVGSDEYAKTPSFIQMQV
TREMLNGAIGAFNAYVRERTGGRNGEMDALPLDRVTEVIAQGDAGKTVLL
SLIHLKRVGISVTAQGQKAYKIWK* back to topmRNA from alignment at scaffold_12:562610..564106- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_5141 ID=mRNA_5141|Name=jgi.p|Nanoce1779_2|591520|organism=Nannochloropsis oceanica|type=mRNA|length=1497bp|location=Sequence derived from alignment at scaffold_12:562610..564106- (Nannochloropsis oceanica)
GGAGGGCCTCGGTACTACTTGCGGAGTGCGGAGAAGAAGGCGAGGGAGTT
GGCGATCGCAAAGAAAGAGGAGGAGGCGGCGGCAAGACGGGCAGCGGCGG
CTCGTGCTCTGGCTGCGGCCAGACGAAGCCCGCGGCTTGCGTCTCTGAGC
AAAAGCCCCACAAGCAGTGCAATGAGCGTAGTTGCATCGTCTGCTTCTAC
AACGACCATGCCGTCCTCTTCCCCCTCGGTGGTGGCGTCGACCGTCCAAA
CTCCCGTGAGCAACACGCGGAAGTCCCCCCGCATCGCGCGGATGGCGTTG
GAACGAGAGGGTGGGAGTGTGCGGCATGGGCCAGGACGAGGCGGTTTGTT
TGCGTCTGATGTAGAGGCGGAGGCCGAAAACGGAGGTAGGGAGGGACCCG
TGTGTCGACCGATCCCCGCGGTGGGGTCCGATGAATACGCAAAGACACCA
AGCTTTATTCAGATGCAAGTGACCAGAGAGATGTTGAATGGGGCGATTGG
CGCGTTTAATGCCTATGTGCGGGAGAGGACAGGAGGGAGGAACGGGGAGA
TGGACGCCTTGCCTTTGGATAGGGTGACGGAGGTGATTGCACAGGGGGAT
GCGGGCAAGACGGTATTGCTCTCTCTCATTCATTTGAAGCGGGTGGGTAT
CTCTGTGACAGCGCAGGGGCAGAAGGCGTACAAAATTTGGAAGTAAGGGA
GGGAGAGAGAAAGGGAGAAAAGTAGAGAGAGAGAACGAGAGAGAGAGAGA
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
GCGAGTGAATGAGAGAGTGTGTGTGTGAAAATGAGAGATGCGAAGCAGCT
AGCACGATTCATTCGAATTGAAAAAAAAAAGAACTAAATGGCAAAGGAAG
ACAGCCGAGTGTTTTCATCCAGAAAGCTTTGTCCGAGCAGAGGGGAGGCC
GTAGCTTGTCTGTCTGTCTCTGTTTGTTAGCGTGTGGGCATATGTCCCTC
TTGTGCGGACGAAAAATATGATGGAAAGCGAAAAATAAAGCTGAAGATAA
TGATACACAGGGGTGACTTTCACGAGATAAGCCAAAATTTTCGTTTAGCT
GGTATGCACACCAGTGGAACAAAAAAAGTAATGCAAACTCAACATTTTCA
TCCACTTTACTCGTATCAAAGCCAAAAAAATGTGCTAGAGCTACCTCCCG
AGGTCTACTGCCACTTCTTTTTGTGCCGAGACCGTTGATCCTTCTCCAAT
TCCGTGGCAGGAAATGTGCCAGGAGCGCGGATACTCTCCCAGGGCCATCA
CTTTGTCTTCTTCTTCCCCTCCAACTGGCTCGCCCCCAGGTGGCCCACCA
CATACAGGGGCATGAAAAAACAAACCACCTTCCTGGATATCCCCCTACGC
CAGCAACACCAACGCAGGCCCGGGGCAGAGCCCTATCATTCCCCACCCGA
TCCCAAACACGGCCTCGCCCACCACAAGCTTCAGTCAACCTAAGGCT back to topCoding sequence (CDS) from alignment at scaffold_12:562610..564106- >mRNA_5141 ID=mRNA_5141|Name=jgi.p|Nanoce1779_2|591520|organism=Nannochloropsis oceanica|type=CDS|length=525bp|location=Sequence derived from alignment at scaffold_12:562610..564106- (Nannochloropsis oceanica)
ATGAGCGTAGTTGCATCGTCTGCTTCTACAACGACCATGCCGTCCTCTTC
CCCCTCGGTGGTGGCGTCGACCGTCCAAACTCCCGTGAGCAACACGCGGA
AGTCCCCCCGCATCGCGCGGATGGCGTTGGAACGAGAGGGTGGGAGTGTG
CGGCATGGGCCAGGACGAGGCGGTTTGTTTGCGTCTGATGTAGAGGCGGA
GGCCGAAAACGGAGGTAGGGAGGGACCCGTGTGTCGACCGATCCCCGCGG
TGGGGTCCGATGAATACGCAAAGACACCAAGCTTTATTCAGATGCAAGTG
ACCAGAGAGATGTTGAATGGGGCGATTGGCGCGTTTAATGCCTATGTGCG
GGAGAGGACAGGAGGGAGGAACGGGGAGATGGACGCCTTGCCTTTGGATA
GGGTGACGGAGGTGATTGCACAGGGGGATGCGGGCAAGACGGTATTGCTC
TCTCTCATTCATTTGAAGCGGGTGGGTATCTCTGTGACAGCGCAGGGGCA
GAAGGCGTACAAAATTTGGAAGTAA back to top
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