|
|
Properties
| Property Name | Value |
|---|
| TranscriptId | 622637 |
| Track | FilteredModels2 |
| ProteinId | 622551 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_3 | supercontig | scaffold_3:1242681..1243694 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_513 ID=mRNA_513|Name=jgi.p|Nanoce1779_2|622551|organism=Nannochloropsis oceanica|type=mRNA|length=891bp
ATGTTGCCCTCCGCCGCTCCAGCTCGTGCCACAGCTTCGCACTCTCGTCG
TACCAAGCCTCTGACAAAGAAGCAGCAGCAGCAGCAGGCAGCGGCGGCAG
AGGAGGAGGAGGAGGAAGAAGAAGAAGAGTACGAGACGGGAAGCGAAGAC
GAGGAAGGGGGGGATGGGTCGGGAAGGGGGAGACGGAAGAAAGCAAAGCT
GACATTGAAGCCCTTGACGGAGGCCCAGCGCGTGGAACGAAGGGAGCGGA
ACCGAGAGCACGCCAAGCGGTCCCGTATGCGCAAGAAGTTCATGCTTGAA
TCCTTGCAAGCCCAAATGCTTGCCTTGCGGAAGGAAAACCTCCGCCTCCG
CCAGCTGGTGTCCACCAAAATCCCCGAAAAAGCCGACCACATTCTCCGGG
GCTGCTCCTCAATCAAGACCCAAGCCATGCTCTCCTCAGTCGAGCTCGGG
CACCATCGTGCACTTGCCGACAACGACGGGAAACTCATCTCAGCCCTGCA
ATTTGCGCAGCAGAATTTCACTGTATCCGACCCCTCCCTGCCTGATAATC
CTATCGTCTACGCCTCCCAGGGTTTCCTCGACCTGACCGGGTACTCATCA
GATCAGGTCGTGGGCCGCAACTGCCGCTTCCTGCAAGGGCCAGGCACTGA
CCCTGCAGCCGTAGATATTATCAGGAGAGGGGTGGCGTTGGGGGAGGACA
CGAGCGTGTGTCTGTTGAACTACAGGGCGGATGGCACGCCGTTTTGGAAC
CAATTCTTCGTTGCGGCGTTGAGGGATTCGGAGGGGAATATCGTCAATCA
CGTGGGAGTGCAGTGTAAGGTGGAGGAGGCGCCCATGGAGGAGGAACTGA
AGGAGAGGGTCAAGACGATTAATTTTGATGAAGAGGAATGA back to topprotein sequence of jgi.p|Nanoce1779_2|622551 >mRNA_513-protein ID=mRNA_513-protein|Name=jgi.p|Nanoce1779_2|622551|organism=Nannochloropsis oceanica|type=polypeptide|length=297bp
MLPSAAPARATASHSRRTKPLTKKQQQQQAAAAEEEEEEEEEEYETGSED
EEGGDGSGRGRRKKAKLTLKPLTEAQRVERRERNREHAKRSRMRKKFMLE
SLQAQMLALRKENLRLRQLVSTKIPEKADHILRGCSSIKTQAMLSSVELG
HHRALADNDGKLISALQFAQQNFTVSDPSLPDNPIVYASQGFLDLTGYSS
DQVVGRNCRFLQGPGTDPAAVDIIRRGVALGEDTSVCLLNYRADGTPFWN
QFFVAALRDSEGNIVNHVGVQCKVEEAPMEEELKERVKTINFDEEE* back to topmRNA from alignment at scaffold_3:1242681..1243694- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_513 ID=mRNA_513|Name=jgi.p|Nanoce1779_2|622551|organism=Nannochloropsis oceanica|type=mRNA|length=1014bp|location=Sequence derived from alignment at scaffold_3:1242681..1243694- (Nannochloropsis oceanica)
ATGTTGCCCTCCGCCGCTCCAGCTCGTGCCACAGCTTCGCACTCTCGTCG
TACCAAGCCTCTGACAAAGAAGCAGCAGCAGCAGCAGGCAGCGGCGGCAG
AGGAGGAGGAGGAGGAAGAAGAAGAAGAGTACGAGACGGGAAGCGAAGAC
GAGGAAGGGGGGGATGGGTCGGGAAGGGGGAGACGGAAGAAAGCAAAGCT
GACATTGAAGCCCTTGACGGAGGCCCAGCGCGTGGAACGAAGGGAGCGGA
ACCGAGAGCACGCCAAGCGGTCCCGTATGCGCAAGAAGTTCATGCTTGAA
TCCTTGCAAGCCCAAATGCTTGCCTTGCGGAAGGAAAACCTCCGCCTCCG
CCAGCTGGTGTCCACCAAAATCCCCGAAAAAGCCGACCACATTCTCCGGG
GCTGCTCCTCAATCAAGACCCAAGCCATGCTCTCCTCAGTCGAGCTCGGG
CACCATCGTGCACTTGCCGACAACGACGGGAAACTCATCTCAGCCCTGCA
ATTTGCGCAGCAGAATTTCACTGTATCCGACCCCTCCCTGCCTGATAATC
GTAAGTCCTCTCTCCCTCCCTTCCTCGCTACATTTCTTTCCTCCCTCCTT
CCCCCACCACCCAGAACCATGCACTCACATTTCTATCTCTCCTTCCCTCC
CTCCCTCCTTCTCTCCCGAACAGCTATCGTCTACGCCTCCCAGGGTTTCC
TCGACCTGACCGGGTACTCATCAGATCAGGTCGTGGGCCGCAACTGCCGC
TTCCTGCAAGGGCCAGGCACTGACCCTGCAGCCGTAGATATTATCAGGAG
AGGGGTGGCGTTGGGGGAGGACACGAGCGTGTGTCTGTTGAACTACAGGG
CGGATGGCACGCCGTTTTGGAACCAATTCTTCGTTGCGGCGTTGAGGGAT
TCGGAGGGGAATATCGTCAATCACGTGGGAGTGCAGTGTAAGGTGGAGGA
GGCGCCCATGGAGGAGGAACTGAAGGAGAGGGTCAAGACGATTAATTTTG
ATGAAGAGGAATGA back to topCoding sequence (CDS) from alignment at scaffold_3:1242681..1243694- >mRNA_513 ID=mRNA_513|Name=jgi.p|Nanoce1779_2|622551|organism=Nannochloropsis oceanica|type=CDS|length=1782bp|location=Sequence derived from alignment at scaffold_3:1242681..1243694- (Nannochloropsis oceanica)
CTATCGTCTACGCCTCCCAGGGTTTCCTCGACCTGACCGGGTACTCATCA
GATCAGGTCGTGGGCCGCAACTGCCGCTTCCTGCAAGGGCCAGGCACTGA
CCCTGCAGCCGTAGATATTATCAGGAGAGGGGTGGCGTTGGGGGAGGACA
CGAGCGTGTGTCTGTTGAACTACAGGGCGGATGGCACGCCGTTTTGGAAC
CAATTCTTCGTTGCGGCGTTGAGGGATTCGGAGGGGAATATCGTCAATCA
CGTGGGAGTGCAGTGTAAGGTGGAGGAGGCGCCCATGGAGGAGGAACTGA
AGGAGAGGGTCAAGACGATTAATTTTGATGAAGAGGAATGAATGTTGCCC
TCCGCCGCTCCAGCTCGTGCCACAGCTTCGCACTCTCGTCGTACCAAGCC
TCTGACAAAGAAGCAGCAGCAGCAGCAGGCAGCGGCGGCAGAGGAGGAGG
AGGAGGAAGAAGAAGAAGAGTACGAGACGGGAAGCGAAGACGAGGAAGGG
GGGGATGGGTCGGGAAGGGGGAGACGGAAGAAAGCAAAGCTGACATTGAA
GCCCTTGACGGAGGCCCAGCGCGTGGAACGAAGGGAGCGGAACCGAGAGC
ACGCCAAGCGGTCCCGTATGCGCAAGAAGTTCATGCTTGAATCCTTGCAA
GCCCAAATGCTTGCCTTGCGGAAGGAAAACCTCCGCCTCCGCCAGCTGGT
GTCCACCAAAATCCCCGAAAAAGCCGACCACATTCTCCGGGGCTGCTCCT
CAATCAAGACCCAAGCCATGCTCTCCTCAGTCGAGCTCGGGCACCATCGT
GCACTTGCCGACAACGACGGGAAACTCATCTCAGCCCTGCAATTTGCGCA
GCAGAATTTCACTGTATCCGACCCCTCCCTGCCTGATAATCCTATCGTCT
ACGCCTCCCAGGGTTTCCTCGACCTGACCGGGTACTCATCAGATCAGGTC
GTGGGCCGCAACTGCCGCTTCCTGCAAGGGCCAGGCACTGACCCTGCAGC
CGTAGATATTATCAGGAGAGGGGTGGCGTTGGGGGAGGACACGAGCGTGT
GTCTGTTGAACTACAGGGCGGATGGCACGCCGTTTTGGAACCAATTCTTC
GTTGCGGCGTTGAGGGATTCGGAGGGGAATATCGTCAATCACGTGGGAGT
GCAGTGTAAGGTGGAGGAGGCGCCCATGGAGGAGGAACTGAAGGAGAGGG
TCAAGACGATTAATTTTGATGAAGAGGAATGAATGTTGCCCTCCGCCGCT
CCAGCTCGTGCCACAGCTTCGCACTCTCGTCGTACCAAGCCTCTGACAAA
GAAGCAGCAGCAGCAGCAGGCAGCGGCGGCAGAGGAGGAGGAGGAGGAAG
AAGAAGAAGAGTACGAGACGGGAAGCGAAGACGAGGAAGGGGGGGATGGG
TCGGGAAGGGGGAGACGGAAGAAAGCAAAGCTGACATTGAAGCCCTTGAC
GGAGGCCCAGCGCGTGGAACGAAGGGAGCGGAACCGAGAGCACGCCAAGC
GGTCCCGTATGCGCAAGAAGTTCATGCTTGAATCCTTGCAAGCCCAAATG
CTTGCCTTGCGGAAGGAAAACCTCCGCCTCCGCCAGCTGGTGTCCACCAA
AATCCCCGAAAAAGCCGACCACATTCTCCGGGGCTGCTCCTCAATCAAGA
CCCAAGCCATGCTCTCCTCAGTCGAGCTCGGGCACCATCGTGCACTTGCC
GACAACGACGGGAAACTCATCTCAGCCCTGCAATTTGCGCAGCAGAATTT
CACTGTATCCGACCCCTCCCTGCCTGATAATC back to top
|