Properties
| Property Name | Value |
|---|
| TranscriptId | 591510 |
| Track | FilteredModels2 |
| ProteinId | 591424 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_12 | supercontig | scaffold_12:497550..498815 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_5113 ID=mRNA_5113|Name=jgi.p|Nanoce1779_2|591424|organism=Nannochloropsis oceanica|type=mRNA|length=880bp
AGTTACTCCCTGCATCTGCAAGACCCACAGCGCCCACAACCCCACTTGAT
GAGAACCACGCCCTTGGTTAAGAACAACATGGCCTCCAACAACACCAACA
ACACGAGCAGCAGCGGCAGCAACGACAGCGGGAACAAGTCGGCGGAGGGC
GGAGCAGGCAAGCACAAGCTACAAAATCGCTGGTCTTTTTTCTACAACAA
CCCCAAAGCCAACCCCATGCTGTCCTGGGAAGAAAAGCTACAGAAAATTT
ATACCTTTGAGACGGTGGAAGATTTTTGGGCTCTTTTTAATTCGGTCGTG
GGTCCGTCTAGGTTAGGACTGCAGGCTGATTACTATTTGTTTAAGGATGG
AGTGAGGCCTTCATATGAGGAGAATCCTACGGGGGGGGTATGGACGTTTA
ATCTGGAGAAAAATAATAAGAAGAAGCTAGAAGAAACATGGTTGCATTTG
GTGCTGGGGATGATCGGGGAGACGATGGAGGATGGAAACGATATTTTGGG
GGCGGTGGTTAGCATTAAGAGGGGGCAAGATCGATTAAGTCTGTGGACAA
AAACGGCAGCAGATAAGGAGCTGCAGGTCCAGATTGCCAGGAGGGTCAAG
ACGAGTTTGGATTTGCCGGAAGGGACGATGCTGGAGTTTAAGCCGAATCA
GAAGGTGGCAGAGGTGGGTGGGCGCATGTCTTCGGCAACAGACGTCAAGA
CCTATGCCGTCTGAGTTTTCGGAAGGCAACTCGACGAGGAATGAAGCGGG
GGAGGGAAGAGGCAACCAAAAAAAGAGGGAAGGTACACAATTGATGGAAG
ATGTACATAGAGAAATAAATCAGTCACCTACGAGACAGGAGTGAAGCAGA
AGCAAATGCACACTGCCCAGTTTTTTGCAA back to topprotein sequence of jgi.p|Nanoce1779_2|591424 >mRNA_5113-protein ID=mRNA_5113-protein|Name=jgi.p|Nanoce1779_2|591424|organism=Nannochloropsis oceanica|type=polypeptide|length=222bp
MRTTPLVKNNMASNNTNNTSSSGSNDSGNKSAEGGAGKHKLQNRWSFFYN
NPKANPMLSWEEKLQKIYTFETVEDFWALFNSVVGPSRLGLQADYYLFKD
GVRPSYEENPTGGVWTFNLEKNNKKKLEETWLHLVLGMIGETMEDGNDIL
GAVVSIKRGQDRLSLWTKTAADKELQVQIARRVKTSLDLPEGTMLEFKPN
QKVAEVGGRMSSATDVKTYAV* back to topmRNA from alignment at scaffold_12:497550..498815+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_5113 ID=mRNA_5113|Name=jgi.p|Nanoce1779_2|591424|organism=Nannochloropsis oceanica|type=mRNA|length=1266bp|location=Sequence derived from alignment at scaffold_12:497550..498815+ (Nannochloropsis oceanica)
AGTTACTCCCTGCATCTGCAAGACCCACAGCGCCCACAACCCCACTTGAT
GAGAACCACGCCCTTGGTTAAGAACAACATGGCCTCCAACAACACCAACA
ACACGAGCAGCAGCGGCAGCAACGACAGCGGGAACAAGTCGGCGGAGGGC
GGAGCAGGCAAGGTAAGTCCTGAGGTTGCGACAGGGTTATGGACGGTGGA
CCATATTGAAGGGGAGAGTTCATCCGGCTCTACTCACCCCCGCATCTGCA
CGCCGCGCTTGCGTATATTTCATGCGATGGCAAGTTAGGAAACTGTGTAG
GTGGGCGCTGTGCATCAATTTTGCGTGTCATCGAGGATCGACTTACCTTT
ATTCCTCCCTCCCTTTCCTTCCCTCCCACATCACAGCACAAGCTACAAAA
TCGCTGGTCTTTTTTCTACAACAACCCCAAAGCCAACCCCATGCTGTCCT
GGGAAGAAAAGCTACAGAAAATTTATACCTTTGAGACGGTGGAAGATTTT
TGGGCTCTTTTTAATTCGGTCGTGGGTCCGTCTAGGTTAGGACTGCAGGC
TGATTACTATTTGTTTAAGGATGGAGTGAGGCCTTCATATGAGGAGAATC
CTACGGGGGGGGTATGGACGTTTAATCTGGAGAAAAATAATAAGAAGAAG
CTAGAAGAAACATGGTTGCATTTGGTGCTGGGGATGATCGGGGAGACGAT
GGAGGATGGAAACGATATTTTGGGGGCGGTGGTTAGCATTAAGAGGGGGC
AAGATCGATTAAGTCTGTGGACAAAAACGGCAGCAGATAAGGAGCTGCAG
GTCCAGATTGCCAGGAGGGTCAAGACGAGTTTGGATTTGCCGGAAGGGAC
GATGCTGGAGTTTAAGCCGAATCAGAAGGTAGGAGAGGGATGGGAGGGAA
CGAGGGAGGGAGGGAAGGAGAGTGGGCATGTCTAGCTCGGATGATATTTG
CTTACGCTTATGATTTTTTGTTCGCACACATGAAACCTCTTTTTTTTCCC
TTTGCCACCATCCTGTTTTGACGACTCACACGATTAATAGGTGGCAGAGG
TGGGTGGGCGCATGTCTTCGGCAACAGACGTCAAGACCTATGCCGTCTGA
GTTTTCGGAAGGCAACTCGACGAGGAATGAAGCGGGGGAGGGAAGAGGCA
ACCAAAAAAAGAGGGAAGGTACACAATTGATGGAAGATGTACATAGAGAA
ATAAATCAGTCACCTACGAGACAGGAGTGAAGCAGAAGCAAATGCACACT
GCCCAGTTTTTTGCAA back to topCoding sequence (CDS) from alignment at scaffold_12:497550..498815+ >mRNA_5113 ID=mRNA_5113|Name=jgi.p|Nanoce1779_2|591424|organism=Nannochloropsis oceanica|type=CDS|length=1998bp|location=Sequence derived from alignment at scaffold_12:497550..498815+ (Nannochloropsis oceanica)
ATGAGAACCACGCCCTTGGTTAAGAACAACATGGCCTCCAACAACACCAA
CAACACGAGCAGCAGCGGCAGCAACGACAGCGGGAACAAGTCGGCGGAGG
GCGGAGCAGGCAAGCACAAGCTACAAAATCGCTGGTCTTTTTTCTACAAC
AACCCCAAAGCCAACCCCATGCTGTCCTGGGAAGAAAAGCTACAGAAAAT
TTATACCTTTGAGACGGTGGAAGATTTTTGGGCTCTTTTTAATTCGGTCG
TGGGTCCGTCTAGGTTAGGACTGCAGGCTGATTACTATTTGTTTAAGGAT
GGAGTGAGGCCTTCATATGAGGAGAATCCTACGGGGGGGGTATGGACGTT
TAATCTGGAGAAAAATAATAAGAAGAAGCTAGAAGAAACATGGTTGCATT
TGGTGCTGGGGATGATCGGGGAGACGATGGAGGATGGAAACGATATTTTG
GGGGCGGTGGTTAGCATTAAGAGGGGGCAAGATCGATTAAGTCTGTGGAC
AAAAACGGCAGCAGATAAGGAGCTGCAGGTCCAGATTGCCAGGAGGGTCA
AGACGAGTTTGGATTTGCCGGAAGGGACGATGCTGGAGTTTAAGCCGAAT
CAGAAGGTGGCAGAGGTGGGTGGGCGCATGTCTTCGGCAACAGACGTCAA
GACCTATGCCGTCTGAATGAGAACCACGCCCTTGGTTAAGAACAACATGG
CCTCCAACAACACCAACAACACGAGCAGCAGCGGCAGCAACGACAGCGGG
AACAAGTCGGCGGAGGGCGGAGCAGGCAAGCACAAGCTACAAAATCGCTG
GTCTTTTTTCTACAACAACCCCAAAGCCAACCCCATGCTGTCCTGGGAAG
AAAAGCTACAGAAAATTTATACCTTTGAGACGGTGGAAGATTTTTGGGCT
CTTTTTAATTCGGTCGTGGGTCCGTCTAGGTTAGGACTGCAGGCTGATTA
CTATTTGTTTAAGGATGGAGTGAGGCCTTCATATGAGGAGAATCCTACGG
GGGGGGTATGGACGTTTAATCTGGAGAAAAATAATAAGAAGAAGCTAGAA
GAAACATGGTTGCATTTGGTGCTGGGGATGATCGGGGAGACGATGGAGGA
TGGAAACGATATTTTGGGGGCGGTGGTTAGCATTAAGAGGGGGCAAGATC
GATTAAGTCTGTGGACAAAAACGGCAGCAGATAAGGAGCTGCAGGTCCAG
ATTGCCAGGAGGGTCAAGACGAGTTTGGATTTGCCGGAAGGGACGATGCT
GGAGTTTAAGCCGAATCAGAAGGTGGCAGAGGTGGGTGGGCGCATGTCTT
CGGCAACAGACGTCAAGACCTATGCCGTCTGAATGAGAACCACGCCCTTG
GTTAAGAACAACATGGCCTCCAACAACACCAACAACACGAGCAGCAGCGG
CAGCAACGACAGCGGGAACAAGTCGGCGGAGGGCGGAGCAGGCAAGCACA
AGCTACAAAATCGCTGGTCTTTTTTCTACAACAACCCCAAAGCCAACCCC
ATGCTGTCCTGGGAAGAAAAGCTACAGAAAATTTATACCTTTGAGACGGT
GGAAGATTTTTGGGCTCTTTTTAATTCGGTCGTGGGTCCGTCTAGGTTAG
GACTGCAGGCTGATTACTATTTGTTTAAGGATGGAGTGAGGCCTTCATAT
GAGGAGAATCCTACGGGGGGGGTATGGACGTTTAATCTGGAGAAAAATAA
TAAGAAGAAGCTAGAAGAAACATGGTTGCATTTGGTGCTGGGGATGATCG
GGGAGACGATGGAGGATGGAAACGATATTTTGGGGGCGGTGGTTAGCATT
AAGAGGGGGCAAGATCGATTAAGTCTGTGGACAAAAACGGCAGCAGATAA
GGAGCTGCAGGTCCAGATTGCCAGGAGGGTCAAGACGAGTTTGGATTTGC
CGGAAGGGACGATGCTGGAGTTTAAGCCGAATCAGAAGGTGGCAGAGGTG
GGTGGGCGCATGTCTTCGGCAACAGACGTCAAGACCTATGCCGTCTGA back to top
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