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Properties
| Property Name | Value |
|---|
| TranscriptId | 630873 |
| Track | FilteredModels2 |
| ProteinId | 630787 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_12 | supercontig | scaffold_12:447310..450263 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_5097 ID=mRNA_5097|Name=jgi.p|Nanoce1779_2|630787|organism=Nannochloropsis oceanica|type=mRNA|length=1674bp
GCAGGAGGAAAACCTTTCCTTTTACTAAATAGTTCGCGCCTTTTTCCATA
CTACGTAGCTGGAGGAGTGATGAAAACTCGTGGTCTCTATGCCAGCATTC
CCCCCTTGCGTGAAGCACACATCGCTTGGTCGAATGAATCCTTGTATTGG
TAGTGTGCCTCGTCTCGTGGTTTTATTTGATCTTCAGCACTGCGCAATGA
TTATGCTCTTCCCAAGCCTTCCAATCCACCCACAGGCTTTTTTTTGGTGG
GTGCGTGTGTGGCTCTCGAGCGACTCATGCTTCTTCCTTCATTTGCGAAT
GCCCCACCGTAATAAGCCAGCAATGAGGGCTGATCACCATACCACACCAC
GTATTGGTTCTCCAAAGAGATGTCCTCAGTGTATGCCCTCCTATATCCCC
TCCGTTCACCATCCCATAGGCGCAGCAGCACATTCGCAGCCGCCCACCTC
AAAACACGAGTACTGAAAGGAGCAGGGTCTCAAGCACCTCGTCTCCTTCT
ACGAAAACTTTCGACAAACAAAAAGCAAACAAGCAAGCAAGCAACACCTG
CAACATGTCTAAAAAAGGTACCAAGCTTTCCCTTGGGGACTTCCAAAAGC
TGAGCGGGGCCGTGGACAGGAACCCTCTGCCTACCGGACCATCTGGCCGT
TCGTCTGAGGATGGTCATCGGGGCGAAGGCCGTCGCGGAGGAGGGAGAGG
CGGCGGCGGTGGCTTCCGTGATCGCGATCGTGGAGATCGTGAAGGGGGCA
GTAATTCGGATGGAAGCTGGTCAAGGGGTGGTGGCGCAGGGGGAGGTTTC
GAGGACCGTGGAGGTTTTCGTGAAAGAGGAGGAGGGGGACGTTTTGGAGA
TGATGACCGGGGCCCACCTCGCAGGGGAGGTTTTGGGGATGATGAACGAG
GCCCGCCTAGGTCAAGGGCCGATGACGGGCCGTGGACTCGAGGAGGAGGA
GACGACGACTTTGATCGTGCCCCGCCCCGTCGTCGCGAGGGTATGGGTGG
TGGAGGGAGGGAAGGAGGGGAAGGCGGCAGAGCAGGAGGAGAAGAAGTTG
AAGAAGGAGTCAGAGGCCGCGAAGCGTCAAGCAGAAGAGGAAGCCCGCCG
CGCTGCGAAGGAAGAGCAGGTTTTGCGGTTGAAGAGGGAAAAGGAGGCTC
AGGTAGCAGCAGCAGCAGAAGCAGCATTGATTGCCAAGGATTTGGTGGCT
GGCGGGCTCAAGGGCAAGGAGCTGCTGGCGGCCGTGAAGGAGAAGGGGGC
ATCGGTGAAGGGCTCGGCCTTGTTGGGCGAGGTATTGTCGGTGCAAGGGT
CGGACGAGGCGTTGGCAGGCTTGGGATGGATGGCCGGCAAGGAGTATGGA
ATGGCGTTGTTGGGCTTGTTGAGGGGAAACGTGGAGGATCAGAAGGAGGC
GGTGTATGCGGTGCAGAGAGTTGTGGAGGGAAGGGGGTATCCCAAGGTGC
CGAAGGATGGAGGGGATCCGTTGTTGGAGAAGCTGTTTCATGGGCTGTAT
GGCGCAGACGTGCTGGATGAGAATGCCTTCACAGGGTGGAGAGATGATGA
CAGAGAGGAAGGGAATAAGCGCAAGGCGGTTGTGCAGACCACGCCGTGGT
TTCAGTGGTTAGAAACGGCGGAGGAGGAGGAGGAGGAGGAGGAGGATGAT
ATCGAGGAGCTGAATAATATCTAA back to topprotein sequence of jgi.p|Nanoce1779_2|630787 >mRNA_5097-protein ID=mRNA_5097-protein|Name=jgi.p|Nanoce1779_2|630787|organism=Nannochloropsis oceanica|type=polypeptide|length=338bp
MVIGAKAVAEEGEAAAVASVIAIVEIVKGAVIRMEAGQGVVAQGEVSRTV
EVFVKEEEGDVLEMMTGAHLAGEVLGMMNEARLGQGPMTGRGLEEEETTT
LIVPRPVVARVWVVEGGKEGKAAEQEEKKLKKESEAAKRQAEEEARRAAK
EEQVLRLKREKEAQVAAAAEAALIAKDLVAGGLKGKELLAAVKEKGASVK
GSALLGEVLSVQGSDEALAGLGWMAGKEYGMALLGLLRGNVEDQKEAVYA
VQRVVEGRGYPKVPKDGGDPLLEKLFHGLYGADVLDENAFTGWRDDDREE
GNKRKAVVQTTPWFQWLETAEEEEEEEEDDIEELNNI* back to topmRNA from alignment at scaffold_12:447310..450263- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_5097 ID=mRNA_5097|Name=jgi.p|Nanoce1779_2|630787|organism=Nannochloropsis oceanica|type=mRNA|length=2954bp|location=Sequence derived from alignment at scaffold_12:447310..450263- (Nannochloropsis oceanica)
GCAGGAGGAAAACCTTTCCTTTTACTAAATAGTTCGCGCCTTTTTCCATA
CTACGTAGCTGGAGGAGTGATGAAAACTCGTGGTCTCTATGCCAGCATTC
CCCCCTTGCGTGAAGCACACATCGCTTGGTCGAATGAATCCTTGTATTGG
TAGTGTGCCTCGTCTCGTGGTTTTATTTGATCTTCAGCACTGCGCAATGA
TTATGCTCTTCCCAAGCCTTCCAATCCACCCACAGGCTTTTTTTTGGTGG
GTGCGTGTGTGGCTCTCGAGCGACTCATGCTTCTTCCTTCATTTGCGAAT
GCCCCACCGTAATAAGCCAGCAATGAGGGCTGATCACCATACCACACCAC
GTATTGGTTCTCCAAAGAGATGTCCTCAGTGTATGCCCTCCTATATCCCC
TCCGTTCACCATCCCATAGGCGCAGCAGCACATTCGCAGCCGCCCACCTC
AAAACACGAGTACTGAAAGGAGCAGGGTCTCAAGCACCTCGTCTCCTTCT
ACGAAAACTTTCGACAAACAAAAAGCAAACAAGCAAGCAAGCAACACCTG
CAACATGTCTAAAAAAGGTACCAAGCTTTCCCTTGGGGACTTCCAAAAGC
TGAGCGGGGCCGTGGACAGGAACCCTCTGCCTACCGGACCATCTGGCCGT
TCGTCTGAGGATGGTCATCGGGGCGAAGGCCGTCGCGGAGGAGGGAGAGG
CGGCGGCGGTGGCTTCCGTGATCGCGATCGTGGAGATCGTGAAGGGGGCA
GTAATTCGGATGGAAGCTGGTCAAGGGGTGGTGGCGCAGGGGGAGGTTTC
GAGGACCGTGGAGGTTTTCGTGAAAGAGGAGGAGGGGGACGTTTTGGAGA
TGATGACCGGGGCCCACCTCGCAGGGGAGGTTTTGGGGATGATGAACGAG
GCCCGCCTAGGTCAAGGGCCGATGACGGGCCGTGGACTCGAGGAGGAGGA
GACGACGACTTTGATCGTGCCCCGCCCCGTCGTCGCGAGGGTATGGGTGG
TGGAGGGAGGGAAGGAGGGGAAGGTGGGGCGGACGACAACACGCCGACGA
ATTGGCGGGGACAGGGAGGAAGAGCGGGAGGGGGGGAGGACATAGGCCCG
CCTCGACGCGGGTATGATGGGCCTGCGGAGAGGCCGCGGTTGAACCTAAA
GCCGAGGAGTACTGCTGGTCCAGGGGGGGAGGGAGGAGGAGGAGGAGGAG
GAGGAGGAGGGAATAGCTTGTTTGGGGGTGCCAAACCTGTTGATACGGCG
GCAAGAGAGGAGGAGATTTTGACGCGGAAATTGGACAAGGTGAGGGTGGG
AGGGGAGGAGGGAGTGGAGGAAGGAGGGGAAGGTCCCGCTGCCGAGTCTC
AGGAAGGAGGGAATGAGAGCACACCTGCTGCTCCTGCTGCTGCTCTTGGG
ATCGAGTCTATGACTGAGGGAGGAGAGGCTGAGACGAAGAAGGAGAAGGA
GCAGCGGTGGGGAGGGGATAAGCCGGAGGGTGAGGAGGAAGGGAGGGAGG
GAGCGACGGTCCGACCCGTGCCTCGACGACGACCAACGCCTGAGCCTGCC
CCCCGAAATATGAGATGGAAGGAGGACGGGCCGGGGGAGGGAGGGAGAGA
GGAAGGAAGACGGATGGGAGGGGGAGAGAAGGAGCTGGGCAATGGACGTG
GAGGAGGGATGGACCGAGGGATGGGGGGAGGGCGGGGTGGTGGAGGAGGA
GGGTTCGGTGGGGGCTATGGAAGGAAGGATGACATGGAAGCGGGAGGAAG
AGATGGAGGGCGGGGTGGTGGAGGGGGAGGGTTCGGTGGGGGCTATGGAA
GGAGGGACCGAGATCGTGAGGGAGGAGATGACTATAGGCGGAGGGATGGG
GAGGGTTTCGGGGGGGCTAGACGAGATGGAGGCAGCAGGGAAGGAGGAAG
GTTGGGAGATGACTATCCTCGACGGGGTGGATGGGAGGAAGAGCGTGGGG
AGCTACGTCGGGAGGTAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA
GGAGGAGGAGGAGGAGGAGGAGAAGGAGGAGGAGGAGGAGGAGGAGGAGA
GGAGGGAGGCGGAGTGCCGGAACGTCGTCCATTGCGGCGGTTCGCGCCTT
CGGGGGGGGAAGATTTGTCGAGGCCACGTCGGTTTGAAGAAAGGTGGGAC
TCACGTACCCCCCCCCCATATGGGAGTAGGGGAAGTAGCCCTGCGTTGTC
TTCTGGTGGAGGAGGAGGAGGAGGAGGGGGGGGAGGAGGAGGAGGAGGAA
GAGGAGGGGAAGGAGCGAACGCGGCTATCAAGGCTGTAGCTGCTGCGGCG
AAGGCGGCAGAGCAGGAGGAGAAGAAGTTGAAGAAGGAGTCAGAGGCCGC
GAAGCGTCAAGCAGAAGAGGAAGCCCGCCGCGCTGCGAAGGAAGAGCAGG
TTTTGCGGTTGAAGAGGGAAAAGGAGGCTCAGGTAGCAGCAGCAGCAGAA
GCAGCATTGATTGCCAAGGATTTGGTGGCTGGCGGGCTCAAGGGCAAGGA
GCTGCTGGCGGCCGTGAAGGAGAAGGGGGCATCGGTGAAGGGCTCGGCCT
TGTTGGGCGAGGTATTGTCGGTGCAAGGGTCGGACGAGGCGTTGGCAGGC
TTGGGATGGATGGCCGGCAAGGAGTATGGAATGGCGTTGTTGGGCTTGTT
GAGGGGAAACGTGGAGGATCAGAAGGAGGCGGTGTATGCGGTGCAGAGAG
TTGTGGAGGGAAGGGGGTATCCCAAGGTGCCGAAGGATGGAGGGGATCCG
TTGTTGGAGAAGCTGTTTCATGGGCTGTATGGCGCAGACGTGCTGGATGA
GAATGCCTTCACAGGGTGGAGAGATGATGACAGAGAGGAAGGGAATAAGC
GCAAGGCGGTTGTGCAGACCACGCCGTGGTTTCAGTGGTTAGAAACGGCG
GAGGAGGAGGAGGAGGAGGAGGAGGATGATATCGAGGAGCTGAATAATAT
CTAA back to topCoding sequence (CDS) from alignment at scaffold_12:447310..450263- >mRNA_5097 ID=mRNA_5097|Name=jgi.p|Nanoce1779_2|630787|organism=Nannochloropsis oceanica|type=CDS|length=2028bp|location=Sequence derived from alignment at scaffold_12:447310..450263- (Nannochloropsis oceanica)
GCGGCAGAGCAGGAGGAGAAGAAGTTGAAGAAGGAGTCAGAGGCCGCGAA
GCGTCAAGCAGAAGAGGAAGCCCGCCGCGCTGCGAAGGAAGAGCAGGTTT
TGCGGTTGAAGAGGGAAAAGGAGGCTCAGGTAGCAGCAGCAGCAGAAGCA
GCATTGATTGCCAAGGATTTGGTGGCTGGCGGGCTCAAGGGCAAGGAGCT
GCTGGCGGCCGTGAAGGAGAAGGGGGCATCGGTGAAGGGCTCGGCCTTGT
TGGGCGAGGTATTGTCGGTGCAAGGGTCGGACGAGGCGTTGGCAGGCTTG
GGATGGATGGCCGGCAAGGAGTATGGAATGGCGTTGTTGGGCTTGTTGAG
GGGAAACGTGGAGGATCAGAAGGAGGCGGTGTATGCGGTGCAGAGAGTTG
TGGAGGGAAGGGGGTATCCCAAGGTGCCGAAGGATGGAGGGGATCCGTTG
TTGGAGAAGCTGTTTCATGGGCTGTATGGCGCAGACGTGCTGGATGAGAA
TGCCTTCACAGGGTGGAGAGATGATGACAGAGAGGAAGGGAATAAGCGCA
AGGCGGTTGTGCAGACCACGCCGTGGTTTCAGTGGTTAGAAACGGCGGAG
GAGGAGGAGGAGGAGGAGGAGGATGATATCGAGGAGCTGAATAATATCTA
AATGGTCATCGGGGCGAAGGCCGTCGCGGAGGAGGGAGAGGCGGCGGCGG
TGGCTTCCGTGATCGCGATCGTGGAGATCGTGAAGGGGGCAGTAATTCGG
ATGGAAGCTGGTCAAGGGGTGGTGGCGCAGGGGGAGGTTTCGAGGACCGT
GGAGGTTTTCGTGAAAGAGGAGGAGGGGGACGTTTTGGAGATGATGACCG
GGGCCCACCTCGCAGGGGAGGTTTTGGGGATGATGAACGAGGCCCGCCTA
GGTCAAGGGCCGATGACGGGCCGTGGACTCGAGGAGGAGGAGACGACGAC
TTTGATCGTGCCCCGCCCCGTCGTCGCGAGGGTATGGGTGGTGGAGGGAG
GGAAGGAGGGGAAGGCGGCAGAGCAGGAGGAGAAGAAGTTGAAGAAGGAG
TCAGAGGCCGCGAAGCGTCAAGCAGAAGAGGAAGCCCGCCGCGCTGCGAA
GGAAGAGCAGGTTTTGCGGTTGAAGAGGGAAAAGGAGGCTCAGGTAGCAG
CAGCAGCAGAAGCAGCATTGATTGCCAAGGATTTGGTGGCTGGCGGGCTC
AAGGGCAAGGAGCTGCTGGCGGCCGTGAAGGAGAAGGGGGCATCGGTGAA
GGGCTCGGCCTTGTTGGGCGAGGTATTGTCGGTGCAAGGGTCGGACGAGG
CGTTGGCAGGCTTGGGATGGATGGCCGGCAAGGAGTATGGAATGGCGTTG
TTGGGCTTGTTGAGGGGAAACGTGGAGGATCAGAAGGAGGCGGTGTATGC
GGTGCAGAGAGTTGTGGAGGGAAGGGGGTATCCCAAGGTGCCGAAGGATG
GAGGGGATCCGTTGTTGGAGAAGCTGTTTCATGGGCTGTATGGCGCAGAC
GTGCTGGATGAGAATGCCTTCACAGGGTGGAGAGATGATGACAGAGAGGA
AGGGAATAAGCGCAAGGCGGTTGTGCAGACCACGCCGTGGTTTCAGTGGT
TAGAAACGGCGGAGGAGGAGGAGGAGGAGGAGGAGGATGATATCGAGGAG
CTGAATAATATCTAAATGGTCATCGGGGCGAAGGCCGTCGCGGAGGAGGG
AGAGGCGGCGGCGGTGGCTTCCGTGATCGCGATCGTGGAGATCGTGAAGG
GGGCAGTAATTCGGATGGAAGCTGGTCAAGGGGTGGTGGCGCAGGGGGAG
GTTTCGAGGACCGTGGAGGTTTTCGTGAAAGAGGAGGAGGGGGACGTTTT
GGAGATGATGACCGGGGCCCACCTCGCAGGGGAGGTTTTGGGGATGATGA
ACGAGGCCCGCCTAGGTCAAGGGCCGATGACGGGCCGTGGACTCGAGGAG
GAGGAGACGACGACTTTGATCGTGCCCCGCCCCGTCGTCGCGAGGGTATG
GGTGGTGGAGGGAGGGAAGGAGGGGAAG back to top
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