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Properties
| Property Name | Value |
|---|
| TranscriptId | 591404 |
| Track | FilteredModels2 |
| ProteinId | 591318 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_12 | supercontig | scaffold_12:396825..398188 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_5074 ID=mRNA_5074|Name=jgi.p|Nanoce1779_2|591318|organism=Nannochloropsis oceanica|type=mRNA|length=1216bp
ACAGGACCAAACCCCCTATTTTACCAGCTGGAAGCATGGTAGCTACCAGA
AGAGATGTTTTTTGCCTGGTTCTTCTCCTCGTCGCCGTGGCCAGTGCTTT
CGTGCGACAACCCGCCCTCACCTCCCCCTGCCAGCAGCAGAAGCTTCAGT
GCTCGAGCTCCACGCAGCAACAACACACGACGCGCATGCGGCCACTTATG
GCGAAGGGCGGTCCTGAGATGGGACGCAAGCAAGCCAAACGTGAGCTGAT
GGAACGACAACGGGCCATGGCGGAGTTCAACGCCGAGATCGAGACAACAC
CTGTGTTTCAGGTCTTCGCGGCCACGCAGAAGATGAAGGGGTTGTGGATG
CCCATTGCTGCTTTTAAGGCCGATAATGTTGCAAAGGGCGTGGTAGATGC
CTCCTTGCAAGAAGGCATGGCCGCCACTTTTTTCAAGGGTGTGTACAAAG
CACAGGTGGAGACTGCCGTGTCCAAGGCGATTTACGATAACGAGAAGCGT
CTACGAGAGCAAGGGCAGTCCATGCATGCTACTTTGAAGAACGCCCCAGC
GAATCAGATTATTTGGGGATTCAAGATTTTGTACAAGCCTTTGCAGGATA
AGGTCGGCAAGACGCAACAGCCCACGATTGTGACCAAGGACATGGCTAAA
AGCCTGTTTGACAAGGTAAGGCGAAGTTTGAAAAAGCCAGGAGGAGAGAA
CGAGGGATGCCCTGCGAAAGCCCCCTCTCACATTTTTTCCCCTGTCGAAC
GAATTACAGTTTAAGGACGGTGTCTCCAGCAAGGTTCAAGAAACGTTCAG
CCTGCAATTGGAGGAGCCCAAGCCCGAAACACCTCCCCCTGCTGCGGGAG
GAAAAAAGAAGAAGGCGAAGAAGGAGGGAAACAACTCCGCGGCAGCCGCA
TCCAAGACCGAGTAAGTAGGATAGAGGAACTGCAGCGACTTAAAAACAAT
TTTAGAAATCACACAGAGAGAGTCTGAAAGGGAGAGTAGACGTGTGCTTG
GGGCAGGATAGGGTCATTCATTGCATGTTTTTCGAGGGACGGTATGTGGC
ATAGGAAAAGATAGGAGGGCTGGGCAAGCGAGGAAGGATTGGAAGGGTTC
TTCAAAATGAAAAAAAAACATAACGACGTCAGCCTTTCTCCATGGACCAC
GTCAATCGGCCAGAGGATGCGACGAGTTCCCCAAAAAAAAGAAGCAACCA
GCACTTAACACCAAAA back to topprotein sequence of jgi.p|Nanoce1779_2|591318 >mRNA_5074-protein ID=mRNA_5074-protein|Name=jgi.p|Nanoce1779_2|591318|organism=Nannochloropsis oceanica|type=polypeptide|length=243bp
MVATRRDVFCLVLLLVAVASAFVRQPALTSPCQQQKLQCSSSTQQQHTTR
MRPLMAKGGPEMGRKQAKRELMERQRAMAEFNAEIETTPVFQVFAATQKM
KGLWMPIAAFKADNVAKGVVDASLQEGMAATFFKGVYKAQVETAVSKAIY
DNEKRLREQGQSMHATLKNAPANQIIWGFKILYKPLQDKVGKTQQPTIVT
KDMAKSLFDKVRRSLKKPGGENEGCPAKAPSHIFSPVERITV* back to topmRNA from alignment at scaffold_12:396825..398188- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_5074 ID=mRNA_5074|Name=jgi.p|Nanoce1779_2|591318|organism=Nannochloropsis oceanica|type=mRNA|length=1364bp|location=Sequence derived from alignment at scaffold_12:396825..398188- (Nannochloropsis oceanica)
ACAGGACCAAACCCCCTATTTTACCAGCTGGAAGCATGGTAGCTACCAGA
AGAGATGTTTTTTGCCTGGTTCTTCTCCTCGTCGCCGTGGCCAGTGCTTT
CGTGCGACAACCCGCCCTCACCTCCCCCTGCCAGCAGCAGAAGCTTCAGT
GCTCGAGCTCCACGCAGCAACAACACACGACGCGCATGCGGCCACTTATG
GCGAAGGGCGGTCCTGAGATGGGACGCAAGCAAGCCAAACGTGAGCTGAT
GGAACGACAACGGGCCATGGCGGAGTTCAACGCCGAGATCGAGACAACAC
CTGTGTTTCAGGTCTTCGCGGCCACGCAGAAGATGAAGGGGTTGTGGATG
CCCATTGCTGCTTTTAAGGCCGATAATGTTGCAAAGGGCGTGGTAGATGC
CTCCTTGCAAGAAGGCATGGCCGCCACTTTTTTCAAGGGTGTGTACAAAG
CACAGGTGGAGACTGCCGTGTCCAAGGCGATTTACGATAACGAGAAGCGT
CTACGAGAGCAAGGGCAGTCCATGCATGCTACTTTGAAGAACGCCCCAGC
GAATCAGATTATTTGGGGATTCAAGATTTTGTACAAGCCTTTGCAGGATA
AGGTGGGTATTGTTTCTGGTATTGATATGGGCGGAGGGATGAGGGAGGGA
TTTGGGAGGGATGAGGGAGGGGTACCGTTCGTCTGGTAGAAGACTTCATG
CTGCACAGCCTTACACATCTTTTTTACGAAATTCTTTCCATGATGTACAG
GTCGGCAAGACGCAACAGCCCACGATTGTGACCAAGGACATGGCTAAAAG
CCTGTTTGACAAGGTAAGGCGAAGTTTGAAAAAGCCAGGAGGAGAGAACG
AGGGATGCCCTGCGAAAGCCCCCTCTCACATTTTTTCCCCTGTCGAACGA
ATTACAGTTTAAGGACGGTGTCTCCAGCAAGGTTCAAGAAACGTTCAGCC
TGCAATTGGAGGAGCCCAAGCCCGAAACACCTCCCCCTGCTGCGGGAGGA
AAAAAGAAGAAGGCGAAGAAGGAGGGAAACAACTCCGCGGCAGCCGCATC
CAAGACCGAGTAAGTAGGATAGAGGAACTGCAGCGACTTAAAAACAATTT
TAGAAATCACACAGAGAGAGTCTGAAAGGGAGAGTAGACGTGTGCTTGGG
GCAGGATAGGGTCATTCATTGCATGTTTTTCGAGGGACGGTATGTGGCAT
AGGAAAAGATAGGAGGGCTGGGCAAGCGAGGAAGGATTGGAAGGGTTCTT
CAAAATGAAAAAAAAACATAACGACGTCAGCCTTTCTCCATGGACCACGT
CAATCGGCCAGAGGATGCGACGAGTTCCCCAAAAAAAAGAAGCAACCAGC
ACTTAACACCAAAA back to topCoding sequence (CDS) from alignment at scaffold_12:396825..398188- >mRNA_5074 ID=mRNA_5074|Name=jgi.p|Nanoce1779_2|591318|organism=Nannochloropsis oceanica|type=CDS|length=1458bp|location=Sequence derived from alignment at scaffold_12:396825..398188- (Nannochloropsis oceanica)
GTCGGCAAGACGCAACAGCCCACGATTGTGACCAAGGACATGGCTAAAAG
CCTGTTTGACAAGGTAAGGCGAAGTTTGAAAAAGCCAGGAGGAGAGAACG
AGGGATGCCCTGCGAAAGCCCCCTCTCACATTTTTTCCCCTGTCGAACGA
ATTACAGTTTAAATGGTAGCTACCAGAAGAGATGTTTTTTGCCTGGTTCT
TCTCCTCGTCGCCGTGGCCAGTGCTTTCGTGCGACAACCCGCCCTCACCT
CCCCCTGCCAGCAGCAGAAGCTTCAGTGCTCGAGCTCCACGCAGCAACAA
CACACGACGCGCATGCGGCCACTTATGGCGAAGGGCGGTCCTGAGATGGG
ACGCAAGCAAGCCAAACGTGAGCTGATGGAACGACAACGGGCCATGGCGG
AGTTCAACGCCGAGATCGAGACAACACCTGTGTTTCAGGTCTTCGCGGCC
ACGCAGAAGATGAAGGGGTTGTGGATGCCCATTGCTGCTTTTAAGGCCGA
TAATGTTGCAAAGGGCGTGGTAGATGCCTCCTTGCAAGAAGGCATGGCCG
CCACTTTTTTCAAGGGTGTGTACAAAGCACAGGTGGAGACTGCCGTGTCC
AAGGCGATTTACGATAACGAGAAGCGTCTACGAGAGCAAGGGCAGTCCAT
GCATGCTACTTTGAAGAACGCCCCAGCGAATCAGATTATTTGGGGATTCA
AGATTTTGTACAAGCCTTTGCAGGATAAGGTCGGCAAGACGCAACAGCCC
ACGATTGTGACCAAGGACATGGCTAAAAGCCTGTTTGACAAGGTAAGGCG
AAGTTTGAAAAAGCCAGGAGGAGAGAACGAGGGATGCCCTGCGAAAGCCC
CCTCTCACATTTTTTCCCCTGTCGAACGAATTACAGTTTAAATGGTAGCT
ACCAGAAGAGATGTTTTTTGCCTGGTTCTTCTCCTCGTCGCCGTGGCCAG
TGCTTTCGTGCGACAACCCGCCCTCACCTCCCCCTGCCAGCAGCAGAAGC
TTCAGTGCTCGAGCTCCACGCAGCAACAACACACGACGCGCATGCGGCCA
CTTATGGCGAAGGGCGGTCCTGAGATGGGACGCAAGCAAGCCAAACGTGA
GCTGATGGAACGACAACGGGCCATGGCGGAGTTCAACGCCGAGATCGAGA
CAACACCTGTGTTTCAGGTCTTCGCGGCCACGCAGAAGATGAAGGGGTTG
TGGATGCCCATTGCTGCTTTTAAGGCCGATAATGTTGCAAAGGGCGTGGT
AGATGCCTCCTTGCAAGAAGGCATGGCCGCCACTTTTTTCAAGGGTGTGT
ACAAAGCACAGGTGGAGACTGCCGTGTCCAAGGCGATTTACGATAACGAG
AAGCGTCTACGAGAGCAAGGGCAGTCCATGCATGCTACTTTGAAGAACGC
CCCAGCGAATCAGATTATTTGGGGATTCAAGATTTTGTACAAGCCTTTGC
AGGATAAG back to top
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