Properties
Property Name | Value |
TranscriptId | 630849 |
Track | FilteredModels2 |
ProteinId | 630763 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_12 | supercontig | scaffold_12:385073..387752 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_5070 ID=mRNA_5070|Name=jgi.p|Nanoce1779_2|630763|organism=Nannochloropsis oceanica|type=mRNA|length=2182bp TCGCAGCAGTCGCCACCACAACAGTTGGGGGCAGGGGCGCTCGGAGGTCT CCTGGGAGGAGGAGACGCCGGGGGAGGAGCTGCGGGAGGAGCCATGGGAT TGGGCGGTATGTTATCCGGTGAATCGGGCTTCACGGCGGATGGGAGGGAG TATCGAACGATCGTGACTCCTGAGGGGTACCGCATCATATTGGGGAGTGC CACGGGGGCCGGTGGTGCATTAGGAGGAGGGGCAGGGATGGGAGGGAGGT CGGGTCAGGAGACGAAGGAGGCCCTGTTGAAGGCTTTGATCAACGATTTG TCTAAGAATGGGAGACAGGAAATCATTCCCCTGCAGTTGGGGTCCAGGGG AGGGAGGGGGGGAGGGGGTGGGGGGGAGTTGTTTTCCGGGTCCTTGGACG GGTCGAGGAGGAGGAGTGGAGGGGAGAGGGGTAGGGAGGGGGGTAGGGAG GGAGAGGAGGGTTTGACGAGGAAGACAGTAGAAGCCATAAGGCAGTTGTG TTCAGAGGGAAGGTTAACGGTGTTGCAGAAACAAAAACTTATATTTTCGG TGATCCGATCGACGAAGCAGGAGGAGGTGAGCCAGGTCGAGATGGCATAT GAGTTGTTGGTGGAGAATGCATTGGCGGGTGATGAGAGTGCTTTGGAAGA ATTTGCAGATCAGTGCGTGATGTTGTGTGCTGAGGGTGGATCGGCGCACA GTTTGACTTATGAGGAGGACTCGGATGACGAAGATTTCGGGGAGGAGTAG CGAGGGAAGGGAGTACAGGGGTCCAGTTTGACTCTTGAAGAGGACTCGGA TGACGAAGATTTTGATGAGTAGAGAGGAAAGGGATGACAGAGGTTCTAGT AGCATTGGGTGTGTAAACAGCGGCGTGTGATATTAACTCGCATTTTGGCC GGCTTCACTCACGGTCACAGGCACATTTGATGCCTGGAGAAGGAAAGGGA CGCAAGTGAGGGGATTGAGGGCTTGTACAAAGAGCGCAGCGCACGCGTAA TGAAGCAAAATTAAGAAGAAGGAAAGGCCCAACCAATGTCTGGAATACCG CAGCCATTAGGGGTAGCAAAGCGACGCGTAGACGCATCGTACTCGCCTCA TCTTGCTTATGTTACTTTCTGTCCAGCGGCCCAATGGGCCCTTTGGTGTA CGTGTTGTTCTTGCGGCTGCTTGCCTCGAACCCAGGATATCATCCAGGCT CTGGCTATCCCTGGCCTTGTTAAGACGACATTGGCCCACAAGTATGGGCA CTCACCCTATGAACAGAAGCTTCAACGCGAGGTTGTGGGCATGCATGGTG TACGTCTGGTGCCTGTAATAGGGCAGGAAGGGGTAACCGGCTGGGGACTC CCTCGGAGAGCAGAATTCATGGCGTGGCATGATCACTTCCAACTTGTTCC ATCGTCGCTCCCACTTCTACACCTGAAATCAACACATATAACATATACAC CCCATCCCCACACATATACAGCCATGGTTGAGCCATCAACAGCTATCGTG GCCATGGTGAGCCGAGTCCCTCCGCAGGTGCTGTTGACGACGGCTCTGGA TTATGTCGCACGCCGAGGACGAAACGGCTGCCTAGCCAAGGAAGTCTGGG ACGTGTGTGAAGTCGAACACGATGCTGGTCTTAGGGCTTACTTGTGGCGC TCCTTGCGTCGGCAGCCGGAGTACTTGTTTTGCAGGCAAGAAGGCGATGC CAGCAGCGACGCCGTGACCATCAGTAGGGGCCCAGATGATAGAAAGAGGA ACCTGAAAACCGAAGAGCAGCAGCACGTCCCATTGACAAACGCGGAGATG GACGCCCTATCCAACGAGGGGATTGATGAGATCATTATTATCGCCCCGGA AGACCATCGTCTCCGCGCCCTAGGCGTCGTGCATCCCTCCGATCTCCCAG AAGAACCCTTTGGAGTCGACGTGCTCGAGATTTTGGCCCAATCCGGGTAT TCGGGCTTGTCCACCGCTGAGGTTGACGAAGAGATGAAACGGAGGGGGTT GGGAGGCACTAGGGGAGTGAGTGCTGCTGCCTTTCTGATCGACCGTTTTG TAGGGCGAGGGCATGTGAGAAAGATGGCGCGGCTTGTGGCGAACCCACCC GCGACGAGAGGGACGAATAGGGGCGGGGGAGGAGGGAAGGAGGGAGGGAA TAAGCGGGTGTTGTTCTCGAGGTTGACGCGGT back to topprotein sequence of jgi.p|Nanoce1779_2|630763 >mRNA_5070-protein ID=mRNA_5070-protein|Name=jgi.p|Nanoce1779_2|630763|organism=Nannochloropsis oceanica|type=polypeptide|length=382bp MSGIPQPLGVAKRRVDASYSPHLAYVTFCPAAQWALWCTCCSCGCLPRTQ DIIQALAIPGLVKTTLAHKYGHSPYEQKLQREVVGMHGVRLVPVIGQEGV TGWGLPRRAEFMAWHDHFQLVPSSLPLLHLKSTHITYTPHPHTYTAMVEP STAIVAMVSRVPPQVLLTTALDYVARRGRNGCLAKEVWDVCEVEHDAGLR AYLWRSLRRQPEYLFCRQEGDASSDAVTISRGPDDRKRNLKTEEQQHVPL TNAEMDALSNEGIDEIIIIAPEDHRLRALGVVHPSDLPEEPFGVDVLEIL AQSGYSGLSTAEVDEEMKRRGLGGTRGVSAAAFLIDRFVGRGHVRKMARL VANPPATRGTNRGGGGGKEGGNKRVLFSRLTR back to topmRNA from alignment at scaffold_12:385073..387752+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_5070 ID=mRNA_5070|Name=jgi.p|Nanoce1779_2|630763|organism=Nannochloropsis oceanica|type=mRNA|length=2680bp|location=Sequence derived from alignment at scaffold_12:385073..387752+ (Nannochloropsis oceanica) TCGCAGCAGTCGCCACCACAACAGTTGGGGGCAGGGGCGCTCGGAGGTCT
CCTGGGAGGAGGAGACGCCGGGGGAGGAGCTGCGGGAGGAGCCATGGGAT
TGGGCGGTATGTTATCCGGTGAATCGGGCTTCACGGCGGATGGGAGGGAG
TATCGAACGATCGTGACTCCTGAGGGGTACCGCATCATATTGGGGAGTGC
CACGGGGGCCGGTGGTGCATTAGGAGGAGGGGCAGGGATGGGAGGGAGGT
CGGGTCAGGAGACGAAGGAGGCCCTGTTGAAGGCTTTGATCAACGATTTG
TCTAAGAATGGGAGACAGGAAATCATTCCCCTGCAGTTGGGGTCCAGGGG
AGGGAGGGGGGGAGGGGGTGGGGGGGAGTTGTTTTCCGGGTCCTTGGACG
GGTCGAGGAGGAGGAGTGGAGGGGAGAGGGGTAGGGAGGGGGGTAGGGAG
GGAGAGGAGGGTTTGACGAGGAAGACAGTAGAAGCCATAAGGCAGTTGTG
TTCAGAGGGAAGGTTAACGGTGTTGCAGAAACAAAAACTTATATTTTCGG
TGATCCGATCGACGAAGCAGGAGGAGGTGAGCCAGGTCGAGATGGCATAT
GAGTTGTTGGTGGAGAATGCATTGGCGGGTGATGAGAGTGCTTTGGAAGA
ATTTGCAGATCAGTGCGTGATGTTGTGTGCTGAGGGTGGATCGGCGCACA
GTTTGACTTATGAGGAGGACTCGGATGACGAAGATTTCGGGGAGGAGTAG
CGAGGGAAGGGAGTACAGGGGTCCAGTTTGACTCTTGAAGAGGACTCGGA
TGACGAAGATTTTGATGAGTAGAGAGGAAAGGGATGACAGAGGTTCTAGT
AGCATTGGGTGTGTAAACAGCGGCGTGTGATATTAACTCGCATTTTGGCC
GGCTTCACTCACGGTCACAGGCACATTTGATGCCTGGAGAAGGAAAGGGA
CGCAAGTGAGGGGATTGAGGGCTTGTACAAAGAGCGCAGCGCACGCGTAA
TGAAGCAAAATTAAGAAGAAGGAAAGGCCCAACCAATGTCTGGAATACCG
CAGCCATTAGGGGTAGCAAAGCGACGCGTAGACGCATCGTACTCGCCTCA
TCTTGCTTATGTTACTTTCTGTCCAGCGGCCCAATGGGCCCTTTGGTGTA
CGTGTTGTTCTTGCGGCTGCTTGCCTCGAACCCAGGATATCATCCAGGCT
CTGGCTATCCCTGGCCTTGTTAAGACGACATTGGCCCACAAGTATGGGCA
CTCACCCTATGAACAGAAGCTTCAACGCGAGGTTGTGGGCATGCATGGTG
TACGTCTGGTGCCTGTAATAGGGCAGGAAGGGGTAACCGGCTGGGGACTC
CCTCGGAGAGCAGAATTCATGGCGTGGCATGATCACTTCCAACTTGTTCC
ATCGTCGCTCCCACTTCTACACCTGAAATCAACACATATAACATATACAC
CCCATCCCCACACATATACAGCCATGGTTGAGCCATCAACAGCTATCGTG
GCCATGGTGAGCCGAGTCCCTCCGCAGGTGCTGTTGACGACGGCTCTGGA
TTATGTCGCACGCCGAGGTACGTCCTCATTCGACGAGGCTGGTCTGCCCG
TCTCCTCCAACTATGCCTGCACACCAAGATGTAATTTGTGAGAGGGCGTA
TGACTTACATTCACAAAGTGCCTTCATCATAGAATGGCAACTTTATTTCT
TGCGTGTGAGCCTGTCCAGAGCTGCAAAAGAAAGTACGCAGCAGCCGAAA
TGCTGCCCCCTATTCCCCAGCCTAGCTGTCCCCTCACGCGCACACTGCGC
ACTGCCTCTGATCCTCCGCTTACACATCTGACAGGACGAAACGGCTGCCT
AGCCAAGGAAGTCTGGGACGTGTGTGAAGTCGAACACGATGCTGGTCTTA
GGGCTTACTTGTGGCGCTCCTTGCGTCGGCAGCCGGAGTACTTGTTTTGC
AGGCAAGAAGGCGATGCCAGCAGCGACGCCGTGACCATCAGTAGGGGCCC
AGATGATAGAAAGAGGAACCTGAAAACCGAAGAGCAGCAGGTACATGAAC
TTATTTCTTCCCGACTGCCACACAGATGGATAGGCTCGTTTTTATAGCAG
ATTCATTGCAATGAAAATAAGGTTAGTCTGACAGTCGTTTCTCTCCTTTT
CCTGACTTCCGCCGAAACAGCACGTCCCATTGACAAACGCGGAGATGGAC
GCCCTATCCAACGAGGGGATTGATGAGATCATTATTATCGGTACGTTTAC
CGCTTTTGCTCAATTCCCGTCTTTTACCTCCCTTGACTCATCCCTTCATT
CCCTCCCCGTCCCCCCTTCCCTCCTTCCCTCCCTCACACAGCCCCGGAAG
ACCATCGTCTCCGCGCCCTAGGCGTCGTGCATCCCTCCGATCTCCCAGAA
GAACCCTTTGGAGTCGACGTGCTCGAGATTTTGGCCCAATCCGGGTATTC
GGGCTTGTCCACCGCTGAGGTTGACGAAGAGATGAAACGGAGGGGGTTGG
GAGGCACTAGGGGAGTGAGTGCTGCTGCCTTTCTGATCGACCGTTTTGTA
GGGCGAGGGCATGTGAGAAAGATGGCGCGGCTTGTGGCGAACCCACCCGC
GACGAGAGGGACGAATAGGGGCGGGGGAGGAGGGAAGGAGGGAGGGAATA
AGCGGGTGTTGTTCTCGAGGTTGACGCGGT back to topCoding sequence (CDS) from alignment at scaffold_12:385073..387752+ >mRNA_5070 ID=mRNA_5070|Name=jgi.p|Nanoce1779_2|630763|organism=Nannochloropsis oceanica|type=CDS|length=4584bp|location=Sequence derived from alignment at scaffold_12:385073..387752+ (Nannochloropsis oceanica) ATGTCTGGAATACCGCAGCCATTAGGGGTAGCAAAGCGACGCGTAGACGC ATCGTACTCGCCTCATCTTGCTTATGTTACTTTCTGTCCAGCGGCCCAAT GGGCCCTTTGGTGTACGTGTTGTTCTTGCGGCTGCTTGCCTCGAACCCAG GATATCATCCAGGCTCTGGCTATCCCTGGCCTTGTTAAGACGACATTGGC CCACAAGTATGGGCACTCACCCTATGAACAGAAGCTTCAACGCGAGGTTG TGGGCATGCATGGTGTACGTCTGGTGCCTGTAATAGGGCAGGAAGGGGTA ACCGGCTGGGGACTCCCTCGGAGAGCAGAATTCATGGCGTGGCATGATCA CTTCCAACTTGTTCCATCGTCGCTCCCACTTCTACACCTGAAATCAACAC ATATAACATATACACCCCATCCCCACACATATACAGCCATGGTTGAGCCA TCAACAGCTATCGTGGCCATGGTGAGCCGAGTCCCTCCGCAGGTGCTGTT GACGACGGCTCTGGATTATGTCGCACGCCGAGGACGAAACGGCTGCCTAG CCAAGGAAGTCTGGGACGTGTGTGAAGTCGAACACGATGCTGGTCTTAGG GCTTACTTGTGGCGCTCCTTGCGTCGGCAGCCGGAGTACTTGTTTTGCAG GCAAGAAGGCGATGCCAGCAGCGACGCCGTGACCATCAGTAGGGGCCCAG ATGATAGAAAGAGGAACCTGAAAACCGAAGAGCAGCAGCACGTCCCATTG ACAAACGCGGAGATGGACGCCCTATCCAACGAGGGGATTGATGAGATCAT TATTATCGCCCCGGAAGACCATCGTCTCCGCGCCCTAGGCGTCGTGCATC CCTCCGATCTCCCAGAAGAACCCTTTGGAGTCGACGTGCTCGAGATTTTG GCCCAATCCGGGTATTCGGGCTTGTCCACCGCTGAGGTTGACGAAGAGAT GAAACGGAGGGGGTTGGGAGGCACTAGGGGAGTGAGTGCTGCTGCCTTTC TGATCGACCGTTTTGTAGGGCGAGGGCATGTGAGAAAGATGGCGCGGCTT GTGGCGAACCCACCCGCGACGAGAGGGACGAATAGGGGCGGGGGAGGAGG GAAGGAGGGAGGGAATAAGCGGGTGTTGTTCTCGAGGTTGACGCGGATGT CTGGAATACCGCAGCCATTAGGGGTAGCAAAGCGACGCGTAGACGCATCG TACTCGCCTCATCTTGCTTATGTTACTTTCTGTCCAGCGGCCCAATGGGC CCTTTGGTGTACGTGTTGTTCTTGCGGCTGCTTGCCTCGAACCCAGGATA TCATCCAGGCTCTGGCTATCCCTGGCCTTGTTAAGACGACATTGGCCCAC AAGTATGGGCACTCACCCTATGAACAGAAGCTTCAACGCGAGGTTGTGGG CATGCATGGTGTACGTCTGGTGCCTGTAATAGGGCAGGAAGGGGTAACCG GCTGGGGACTCCCTCGGAGAGCAGAATTCATGGCGTGGCATGATCACTTC CAACTTGTTCCATCGTCGCTCCCACTTCTACACCTGAAATCAACACATAT AACATATACACCCCATCCCCACACATATACAGCCATGGTTGAGCCATCAA CAGCTATCGTGGCCATGGTGAGCCGAGTCCCTCCGCAGGTGCTGTTGACG ACGGCTCTGGATTATGTCGCACGCCGAGGACGAAACGGCTGCCTAGCCAA GGAAGTCTGGGACGTGTGTGAAGTCGAACACGATGCTGGTCTTAGGGCTT ACTTGTGGCGCTCCTTGCGTCGGCAGCCGGAGTACTTGTTTTGCAGGCAA GAAGGCGATGCCAGCAGCGACGCCGTGACCATCAGTAGGGGCCCAGATGA TAGAAAGAGGAACCTGAAAACCGAAGAGCAGCAGCACGTCCCATTGACAA ACGCGGAGATGGACGCCCTATCCAACGAGGGGATTGATGAGATCATTATT ATCGCCCCGGAAGACCATCGTCTCCGCGCCCTAGGCGTCGTGCATCCCTC CGATCTCCCAGAAGAACCCTTTGGAGTCGACGTGCTCGAGATTTTGGCCC AATCCGGGTATTCGGGCTTGTCCACCGCTGAGGTTGACGAAGAGATGAAA CGGAGGGGGTTGGGAGGCACTAGGGGAGTGAGTGCTGCTGCCTTTCTGAT CGACCGTTTTGTAGGGCGAGGGCATGTGAGAAAGATGGCGCGGCTTGTGG CGAACCCACCCGCGACGAGAGGGACGAATAGGGGCGGGGGAGGAGGGAAG GAGGGAGGGAATAAGCGGGTGTTGTTCTCGAGGTTGACGCGGATGTCTGG AATACCGCAGCCATTAGGGGTAGCAAAGCGACGCGTAGACGCATCGTACT CGCCTCATCTTGCTTATGTTACTTTCTGTCCAGCGGCCCAATGGGCCCTT TGGTGTACGTGTTGTTCTTGCGGCTGCTTGCCTCGAACCCAGGATATCAT CCAGGCTCTGGCTATCCCTGGCCTTGTTAAGACGACATTGGCCCACAAGT ATGGGCACTCACCCTATGAACAGAAGCTTCAACGCGAGGTTGTGGGCATG CATGGTGTACGTCTGGTGCCTGTAATAGGGCAGGAAGGGGTAACCGGCTG GGGACTCCCTCGGAGAGCAGAATTCATGGCGTGGCATGATCACTTCCAAC TTGTTCCATCGTCGCTCCCACTTCTACACCTGAAATCAACACATATAACA TATACACCCCATCCCCACACATATACAGCCATGGTTGAGCCATCAACAGC TATCGTGGCCATGGTGAGCCGAGTCCCTCCGCAGGTGCTGTTGACGACGG CTCTGGATTATGTCGCACGCCGAGGACGAAACGGCTGCCTAGCCAAGGAA GTCTGGGACGTGTGTGAAGTCGAACACGATGCTGGTCTTAGGGCTTACTT GTGGCGCTCCTTGCGTCGGCAGCCGGAGTACTTGTTTTGCAGGCAAGAAG GCGATGCCAGCAGCGACGCCGTGACCATCAGTAGGGGCCCAGATGATAGA AAGAGGAACCTGAAAACCGAAGAGCAGCAGCACGTCCCATTGACAAACGC GGAGATGGACGCCCTATCCAACGAGGGGATTGATGAGATCATTATTATCG CCCCGGAAGACCATCGTCTCCGCGCCCTAGGCGTCGTGCATCCCTCCGAT CTCCCAGAAGAACCCTTTGGAGTCGACGTGCTCGAGATTTTGGCCCAATC CGGGTATTCGGGCTTGTCCACCGCTGAGGTTGACGAAGAGATGAAACGGA GGGGGTTGGGAGGCACTAGGGGAGTGAGTGCTGCTGCCTTTCTGATCGAC CGTTTTGTAGGGCGAGGGCATGTGAGAAAGATGGCGCGGCTTGTGGCGAA CCCACCCGCGACGAGAGGGACGAATAGGGGCGGGGGAGGAGGGAAGGAGG GAGGGAATAAGCGGGTGTTGTTCTCGAGGTTGACGCGGATGTCTGGAATA CCGCAGCCATTAGGGGTAGCAAAGCGACGCGTAGACGCATCGTACTCGCC TCATCTTGCTTATGTTACTTTCTGTCCAGCGGCCCAATGGGCCCTTTGGT GTACGTGTTGTTCTTGCGGCTGCTTGCCTCGAACCCAGGATATCATCCAG GCTCTGGCTATCCCTGGCCTTGTTAAGACGACATTGGCCCACAAGTATGG GCACTCACCCTATGAACAGAAGCTTCAACGCGAGGTTGTGGGCATGCATG GTGTACGTCTGGTGCCTGTAATAGGGCAGGAAGGGGTAACCGGCTGGGGA CTCCCTCGGAGAGCAGAATTCATGGCGTGGCATGATCACTTCCAACTTGT TCCATCGTCGCTCCCACTTCTACACCTGAAATCAACACATATAACATATA CACCCCATCCCCACACATATACAGCCATGGTTGAGCCATCAACAGCTATC GTGGCCATGGTGAGCCGAGTCCCTCCGCAGGTGCTGTTGACGACGGCTCT GGATTATGTCGCACGCCGAGGACGAAACGGCTGCCTAGCCAAGGAAGTCT GGGACGTGTGTGAAGTCGAACACGATGCTGGTCTTAGGGCTTACTTGTGG CGCTCCTTGCGTCGGCAGCCGGAGTACTTGTTTTGCAGGCAAGAAGGCGA TGCCAGCAGCGACGCCGTGACCATCAGTAGGGGCCCAGATGATAGAAAGA GGAACCTGAAAACCGAAGAGCAGCAGCACGTCCCATTGACAAACGCGGAG ATGGACGCCCTATCCAACGAGGGGATTGATGAGATCATTATTATCGCCCC GGAAGACCATCGTCTCCGCGCCCTAGGCGTCGTGCATCCCTCCGATCTCC CAGAAGAACCCTTTGGAGTCGACGTGCTCGAGATTTTGGCCCAATCCGGG TATTCGGGCTTGTCCACCGCTGAGGTTGACGAAGAGATGAAACGGAGGGG GTTGGGAGGCACTAGGGGAGTGAGTGCTGCTGCCTTTCTGATCGACCGTT TTGTAGGGCGAGGGCATGTGAGAAAGATGGCGCGGCTTGTGGCGAACCCA CCCGCGACGAGAGGGACGAATAGGGGCGGGGGAGGAGGGAAGGAGGGAGG GAATAAGCGGGTGTTGTTCTCGAGGTTGACGCGG back to top
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