Properties
Property Name | Value |
TranscriptId | 591370 |
Track | FilteredModels2 |
ProteinId | 591284 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_12 | supercontig | scaffold_12:365598..367559 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_5064 ID=mRNA_5064|Name=jgi.p|Nanoce1779_2|591284|organism=Nannochloropsis oceanica|type=mRNA|length=1663bp ACAGGCACTGGTCGCAAGACCTGATACTTCGTCGATTGACCCCCTTCTCT GGACAATTTGGGCTGCCGTATCTCTCACTCATCCTTTCTCTGTGCTGATC CCGACCCTGCAGTCGTCAAGGCATGTCATCCTTAGCCGCGGCGCAAGCCG ACGGGTATTACCGTCCCCCAGACTGGGATGGCAAGGCTTCCTTGAACAAG ATCACCGGCTCCAAAGGCCACAACCAGTTCACACAAAAGGGTGTGGTCCG CTTCGAGCTTCCATACAACAGCTGGTGTTTGAAATGTGAATCCCACATCG GCAAGGGCGTGCGCTTCAATGCCACAAAAGTGCAGGCCGGCAACTACTTC TCCACGAAAATTTGGGAATTCCGCATGAAATGTGCCACGTGCAAGAATCT TCTCATCATCAGGACGGACCCGAAGAATTGCGATTACGAGTTTGTGGAGG GGATCCGGAGGCGCGAGCAAGAATATGACGCAGAGTCTATTGGCTTGCCT GTGTTGTCGGTAGAGCCTTCTGGAGCTGCCGGAGGTGTAGAAGGGAAAGG AAAAGCAGGTGTTCCTATATCAGCCAATGCGCCTCATGCGGGTGTGTCGG TCGATCCGTTGGAGGTCTTGGAGAGAAGTAAGGACCACAAGCGACAGATG AATGCAGCAGCAGCCCGATTGCAGGAATTGATGGACGCAAACAACAGGCT AGAGGCAGATACAAGTGGAGTGAATCGGCTCATGCGGACGAAATTCCGCC AAGAGAAGAAAGTGTTGCAGGAATTGGAGGCCGAGAGTGCGGCGAAGGGT TTTCGGTTTCGAATGTTGCCTGCCAGTGAGGAGGATGGGAAGGAGGGGCC GGCTGTGTTGCTCGCGGGAGGGTCGGGCGGACTGACCCGTGCTCGGCGAG AAGGGTTTAGGAAAGGGGCCAAGGCAAAATTCACTAGTATTATGAGCTCA TCGATTTTCGATGGGGATGGCAGTTCGCATAAGAAACGCGACACTCAGTC GTCGTCGTCATCGTCCGCGTTGGTGGTATCGGGGCGGCGGGGGAGCAGCA GTAGGAGTAGCAGCAGTAGAGACCTGCAGAGCAAGGCGGTGGTGGCTGCT GACGCGAAGAAAGCTTTAGCTGTCAAGCGCGCCAAGTTGGGCATTAATCC GGCAAATTTTAGTGTGCCCTCTACTGGTAGTTCGTCGTCTGTCTTGTCGA CAGTGGTTGCGCGAAAGAAAGGCTAAGATACACCTGGGGGCTGGAAACCT TGTACATTTTTGTAAGAACACATGTATTATTAAATGTATTAAAGCTCTAA AAAGTCAAAGAAACAAAGGCACACGCATGTGTTATATATATATATCCTGG AAAATAACATACCATCATGGGCTCGCGCGCAACCCAGCTTCAACAAGGCC TCGCCAGCCTCACTTTGCACTTGATGCTGTTGCTTCCAAGTTCGTCCCGC TGCATTAAGGTCGGACAAAATCCAACTCCGGCAAACAGACACTTCGCCTG TAAGCTATGAGGTGACCTCTTCATGGTCTACCTGGGGCGCTGTGATGGGG AGGCCAGTGGTCGGGTTCTCCATACGACCTACACCGCGGCTTTCGTCCAA GATGGGTATCACTCACGAACACCATACCTCACACCCACACACAGGCGCCA TGCCGCAGCCGCT back to topprotein sequence of jgi.p|Nanoce1779_2|591284 >mRNA_5064-protein ID=mRNA_5064-protein|Name=jgi.p|Nanoce1779_2|591284|organism=Nannochloropsis oceanica|type=polypeptide|length=368bp MSSLAAAQADGYYRPPDWDGKASLNKITGSKGHNQFTQKGVVRFELPYNS WCLKCESHIGKGVRFNATKVQAGNYFSTKIWEFRMKCATCKNLLIIRTDP KNCDYEFVEGIRRREQEYDAESIGLPVLSVEPSGAAGGVEGKGKAGVPIS ANAPHAGVSVDPLEVLERSKDHKRQMNAAAARLQELMDANNRLEADTSGV NRLMRTKFRQEKKVLQELEAESAAKGFRFRMLPASEEDGKEGPAVLLAGG SGGLTRARREGFRKGAKAKFTSIMSSSIFDGDGSSHKKRDTQSSSSSSAL VVSGRRGSSSRSSSSRDLQSKAVVAADAKKALAVKRAKLGINPANFSVPS TGSSSSVLSTVVARKKG* back to topmRNA from alignment at scaffold_12:365598..367559- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_5064 ID=mRNA_5064|Name=jgi.p|Nanoce1779_2|591284|organism=Nannochloropsis oceanica|type=mRNA|length=1962bp|location=Sequence derived from alignment at scaffold_12:365598..367559- (Nannochloropsis oceanica) ACAGGCACTGGTCGCAAGACCTGATACTTCGTCGATTGACCCCCTTCTCT
GGACAATTTGGGCTGCCGTATCTCTCACTCATCCTTTCTCTGTGCTGATC
CCGACCCTGCAGTCGTCAAGGCATGTCATCCTTAGCCGCGGCGCAAGCCG
ACGGGTATTACCGTCCCCCAGACTGGGATGGCAAGGCTTCCTTGAACAAG
ATCACCGGCTCCAAAGGTGTGTGGTACTATGTGTGATGTGGTGGTTCCAG
GGTCTGAGTATCAGATTTGTCCCTCGGGACTGACCCTATCCCTCCACCAA
TTTTAAATCCCCTCCTACAGGCCACAACCAGTTCACACAAAAGGGTGTGG
TCCGCTTCGAGCTTCCATACAACAGCTGGTGTTTGAAATGTGAATCCCAC
ATCGGCAAGGGCGTGCGCTTCAATGCCACAAAAGTGCAGGTGCGCTCGTG
TGAAAGGTTGACAATGGTTACTCCGCGTGTGAGTGTATGTGTGAGATGTT
CCTTGTATATCTTCTATTTCCCGCGCATCCCTTGCAATGCATATGTTGTG
TCCCTCTGCCGCAATTTTTAGGCCTCACGGGTGCTTTCCCTATTCTCCCT
CCCTCGCCCCCCATCCCTCCTCCCTCTCTTGAAGGCCGGCAACTACTTCT
CCACGAAAATTTGGGAATTCCGCATGAAATGTGCCACGTGCAAGAATCTT
CTCATCATCAGGACGGACCCGAAGAATTGCGATTACGAGTTTGTGGAGGG
GATCCGGAGGCGCGAGCAAGAATATGACGCAGAGTCTATTGGCTTGCCTG
TGTTGTCGGTAGAGCCTTCTGGAGCTGCCGGAGGTGTAGAAGGGAAAGGA
AAAGCAGGTGTTCCTATATCAGCCAATGCGCCTCATGCGGGTGTGTCGGT
CGATCCGTTGGAGGTCTTGGAGAGAAGTAAGGACCACAAGCGACAGATGA
ATGCAGCAGCAGCCCGATTGCAGGAATTGATGGACGCAAACAACAGGCTA
GAGGCAGATACAAGTGGAGTGAATCGGCTCATGCGGACGAAATTCCGCCA
AGAGAAGAAAGTGTTGCAGGAATTGGAGGCCGAGAGTGCGGCGAAGGGTT
TTCGGTTTCGAATGTTGCCTGCCAGTGAGGAGGATGGGAAGGAGGGGCCG
GCTGTGTTGCTCGCGGGAGGGTCGGGCGGACTGACCCGTGCTCGGCGAGA
AGGGTTTAGGAAAGGGGCCAAGGCAAAATTCACTAGTATTATGAGCTCAT
CGATTTTCGATGGGGATGGCAGTTCGCATAAGAAACGCGACACTCAGTCG
TCGTCGTCATCGTCCGCGTTGGTGGTATCGGGGCGGCGGGGGAGCAGCAG
TAGGAGTAGCAGCAGTAGAGACCTGCAGAGCAAGGCGGTGGTGGCTGCTG
ACGCGAAGAAAGCTTTAGCTGTCAAGCGCGCCAAGTTGGGCATTAATCCG
GCAAATTTTAGTGTGCCCTCTACTGGTAGTTCGTCGTCTGTCTTGTCGAC
AGTGGTTGCGCGAAAGAAAGGCTAAGATACACCTGGGGGCTGGAAACCTT
GTACATTTTTGTAAGAACACATGTATTATTAAATGTATTAAAGCTCTAAA
AAGTCAAAGAAACAAAGGCACACGCATGTGTTATATATATATATCCTGGA
AAATAACATACCATCATGGGCTCGCGCGCAACCCAGCTTCAACAAGGCCT
CGCCAGCCTCACTTTGCACTTGATGCTGTTGCTTCCAAGTTCGTCCCGCT
GCATTAAGGTCGGACAAAATCCAACTCCGGCAAACAGACACTTCGCCTGT
AAGCTATGAGGTGACCTCTTCATGGTCTACCTGGGGCGCTGTGATGGGGA
GGCCAGTGGTCGGGTTCTCCATACGACCTACACCGCGGCTTTCGTCCAAG
ATGGGTATCACTCACGAACACCATACCTCACACCCACACACAGGCGCCAT
GCCGCAGCCGCT back to topCoding sequence (CDS) from alignment at scaffold_12:365598..367559- >mRNA_5064 ID=mRNA_5064|Name=jgi.p|Nanoce1779_2|591284|organism=Nannochloropsis oceanica|type=CDS|length=3312bp|location=Sequence derived from alignment at scaffold_12:365598..367559- (Nannochloropsis oceanica) GCCGGCAACTACTTCTCCACGAAAATTTGGGAATTCCGCATGAAATGTGC CACGTGCAAGAATCTTCTCATCATCAGGACGGACCCGAAGAATTGCGATT ACGAGTTTGTGGAGGGGATCCGGAGGCGCGAGCAAGAATATGACGCAGAG TCTATTGGCTTGCCTGTGTTGTCGGTAGAGCCTTCTGGAGCTGCCGGAGG TGTAGAAGGGAAAGGAAAAGCAGGTGTTCCTATATCAGCCAATGCGCCTC ATGCGGGTGTGTCGGTCGATCCGTTGGAGGTCTTGGAGAGAAGTAAGGAC CACAAGCGACAGATGAATGCAGCAGCAGCCCGATTGCAGGAATTGATGGA CGCAAACAACAGGCTAGAGGCAGATACAAGTGGAGTGAATCGGCTCATGC GGACGAAATTCCGCCAAGAGAAGAAAGTGTTGCAGGAATTGGAGGCCGAG AGTGCGGCGAAGGGTTTTCGGTTTCGAATGTTGCCTGCCAGTGAGGAGGA TGGGAAGGAGGGGCCGGCTGTGTTGCTCGCGGGAGGGTCGGGCGGACTGA CCCGTGCTCGGCGAGAAGGGTTTAGGAAAGGGGCCAAGGCAAAATTCACT AGTATTATGAGCTCATCGATTTTCGATGGGGATGGCAGTTCGCATAAGAA ACGCGACACTCAGTCGTCGTCGTCATCGTCCGCGTTGGTGGTATCGGGGC GGCGGGGGAGCAGCAGTAGGAGTAGCAGCAGTAGAGACCTGCAGAGCAAG GCGGTGGTGGCTGCTGACGCGAAGAAAGCTTTAGCTGTCAAGCGCGCCAA GTTGGGCATTAATCCGGCAAATTTTAGTGTGCCCTCTACTGGTAGTTCGT CGTCTGTCTTGTCGACAGTGGTTGCGCGAAAGAAAGGCTAAGCCACAACC AGTTCACACAAAAGGGTGTGGTCCGCTTCGAGCTTCCATACAACAGCTGG TGTTTGAAATGTGAATCCCACATCGGCAAGGGCGTGCGCTTCAATGCCAC AAAAGTGCAGATGTCATCCTTAGCCGCGGCGCAAGCCGACGGGTATTACC GTCCCCCAGACTGGGATGGCAAGGCTTCCTTGAACAAGATCACCGGCTCC AAAGGCCGGCAACTACTTCTCCACGAAAATTTGGGAATTCCGCATGAAAT GTGCCACGTGCAAGAATCTTCTCATCATCAGGACGGACCCGAAGAATTGC GATTACGAGTTTGTGGAGGGGATCCGGAGGCGCGAGCAAGAATATGACGC AGAGTCTATTGGCTTGCCTGTGTTGTCGGTAGAGCCTTCTGGAGCTGCCG GAGGTGTAGAAGGGAAAGGAAAAGCAGGTGTTCCTATATCAGCCAATGCG CCTCATGCGGGTGTGTCGGTCGATCCGTTGGAGGTCTTGGAGAGAAGTAA GGACCACAAGCGACAGATGAATGCAGCAGCAGCCCGATTGCAGGAATTGA TGGACGCAAACAACAGGCTAGAGGCAGATACAAGTGGAGTGAATCGGCTC ATGCGGACGAAATTCCGCCAAGAGAAGAAAGTGTTGCAGGAATTGGAGGC CGAGAGTGCGGCGAAGGGTTTTCGGTTTCGAATGTTGCCTGCCAGTGAGG AGGATGGGAAGGAGGGGCCGGCTGTGTTGCTCGCGGGAGGGTCGGGCGGA CTGACCCGTGCTCGGCGAGAAGGGTTTAGGAAAGGGGCCAAGGCAAAATT CACTAGTATTATGAGCTCATCGATTTTCGATGGGGATGGCAGTTCGCATA AGAAACGCGACACTCAGTCGTCGTCGTCATCGTCCGCGTTGGTGGTATCG GGGCGGCGGGGGAGCAGCAGTAGGAGTAGCAGCAGTAGAGACCTGCAGAG CAAGGCGGTGGTGGCTGCTGACGCGAAGAAAGCTTTAGCTGTCAAGCGCG CCAAGTTGGGCATTAATCCGGCAAATTTTAGTGTGCCCTCTACTGGTAGT TCGTCGTCTGTCTTGTCGACAGTGGTTGCGCGAAAGAAAGGCTAAGCCAC AACCAGTTCACACAAAAGGGTGTGGTCCGCTTCGAGCTTCCATACAACAG CTGGTGTTTGAAATGTGAATCCCACATCGGCAAGGGCGTGCGCTTCAATG CCACAAAAGTGCAGATGTCATCCTTAGCCGCGGCGCAAGCCGACGGGTAT TACCGTCCCCCAGACTGGGATGGCAAGGCTTCCTTGAACAAGATCACCGG CTCCAAAGGCCGGCAACTACTTCTCCACGAAAATTTGGGAATTCCGCATG AAATGTGCCACGTGCAAGAATCTTCTCATCATCAGGACGGACCCGAAGAA TTGCGATTACGAGTTTGTGGAGGGGATCCGGAGGCGCGAGCAAGAATATG ACGCAGAGTCTATTGGCTTGCCTGTGTTGTCGGTAGAGCCTTCTGGAGCT GCCGGAGGTGTAGAAGGGAAAGGAAAAGCAGGTGTTCCTATATCAGCCAA TGCGCCTCATGCGGGTGTGTCGGTCGATCCGTTGGAGGTCTTGGAGAGAA GTAAGGACCACAAGCGACAGATGAATGCAGCAGCAGCCCGATTGCAGGAA TTGATGGACGCAAACAACAGGCTAGAGGCAGATACAAGTGGAGTGAATCG GCTCATGCGGACGAAATTCCGCCAAGAGAAGAAAGTGTTGCAGGAATTGG AGGCCGAGAGTGCGGCGAAGGGTTTTCGGTTTCGAATGTTGCCTGCCAGT GAGGAGGATGGGAAGGAGGGGCCGGCTGTGTTGCTCGCGGGAGGGTCGGG CGGACTGACCCGTGCTCGGCGAGAAGGGTTTAGGAAAGGGGCCAAGGCAA AATTCACTAGTATTATGAGCTCATCGATTTTCGATGGGGATGGCAGTTCG CATAAGAAACGCGACACTCAGTCGTCGTCGTCATCGTCCGCGTTGGTGGT ATCGGGGCGGCGGGGGAGCAGCAGTAGGAGTAGCAGCAGTAGAGACCTGC AGAGCAAGGCGGTGGTGGCTGCTGACGCGAAGAAAGCTTTAGCTGTCAAG CGCGCCAAGTTGGGCATTAATCCGGCAAATTTTAGTGTGCCCTCTACTGG TAGTTCGTCGTCTGTCTTGTCGACAGTGGTTGCGCGAAAGAAAGGCTAAG CCACAACCAGTTCACACAAAAGGGTGTGGTCCGCTTCGAGCTTCCATACA ACAGCTGGTGTTTGAAATGTGAATCCCACATCGGCAAGGGCGTGCGCTTC AATGCCACAAAAGTGCAGATGTCATCCTTAGCCGCGGCGCAAGCCGACGG GTATTACCGTCCCCCAGACTGGGATGGCAAGGCTTCCTTGAACAAGATCA CCGGCTCCAAAG back to top
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