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Properties
| Property Name | Value |
|---|
| TranscriptId | 591361 |
| Track | FilteredModels2 |
| ProteinId | 591275 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_12 | supercontig | scaffold_12:357076..358668 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_5061 ID=mRNA_5061|Name=jgi.p|Nanoce1779_2|591275|organism=Nannochloropsis oceanica|type=mRNA|length=1593bp
TCCACTCATCGTTATGCGCATCTTTTCCGTGGCTGCTTTCTGCAAGTACA
CCAACAATTCATGGGCGGGCAAACAAGGGGTGGAGTTAACCTCGTGTTCC
TCTCGGTCCACTGTGTCCTCGATAACAGCTTGACTTGTGCGGTTGAGAGT
GCGGCTCTCCCAGCCCGAGCGCAACTCCTCCTCCCGCCGCAAGCCCCGAA
AGACGGAAGCAGGAAGAGATTGTCCGTCATCCCCTTCCTCCTTTTTCCTC
CTTTTCTTTCCCATCTCGCCCTTACACTTTCTTGCCATACTTTCTTTGTC
CTCCTTTACCTGCTTCTGGTCCTGCTGTTGCTTTCGCTGTTGCACCAAAA
GCATGGCCTTGAAGAACGCCCGCTCCTTTTCCACTCGAGGAGCCAGCTGA
TTAGGTGCTGCTCCCAAGCTTAGGTCGCACCCACAGTGCTGTGCAATACA
CAGAGTACACACGCGGCAGATGGCGGACTCCACACACACCTGGGCAAAAG
CACAGCCCAACCGCTGCTGATTTCGAAGAGAGGGGTCTGTGGCTGTGCGT
TTGTCATATAAAGGCAAACACCACTCAATTGCTGGCTTAGTGCTATTGCC
GCTGCTATTATTACTGCTGCTGTTTCGGGTAGTGGCTACCAAAGGATTGG
AAGCTGCGAGGCGCCGATTGAGGGCATGGGCACGTGGCACAGCCATAGAC
TCCAACGATGACAATAGATTTTCTAACGCGACCTTGGCGGGAGTACGAGC
AGTAGGAATGGCCGCAGAGCCACCAGTAGAGCAACCAGCTTCAGCTGAAA
GAGGAGGGAGGGGCATGCCGTGCAATTCTTGAGCCAGGGCATCACGGACT
ACCTCACTAGAAAGGACCGACAGGAGCTCTTGGACCACAAGAGGGTGGAT
TGCGACAAAGGTGGGTGACGCAATCTGTGGACGCCCCTTACCCCTAAGCA
TGTCCACATGTACCCCTCCGGGCAAGCAAGCCACGCTGCTGCTGTTGCTG
TTGCTGTTGCTATTGCTGTCGCTACTGCTGCTGTCTCCTCTTCCGGCAGC
CGCAGCAGCAGCAGCAGCACGGCCGTTGACGACGTTTCCTTGGATCAAAA
GGGATTTGAGCATTGACACGAGGGGTGCAGTGAGCTCCCGCACGGCCAAA
CACACCGGACCAGGTTGCAACCACTTTACATGTAGGGGTATCCCTAAGGA
CCAGGGCATCATTTCCATTGCCGTCGACTCTCCCTTCTCCGAGTCCTCAT
CTTCGTCCCCTTGTTGCTGCTTCTGCTGTATCGCTGACTTCTTTCGCTTT
CTCTCCTCGGTTCGCCGTCGAACTGGAGGTAACCAAGCAGCGGCCTGACG
TTCATTATATTTGACTAGAGCGCAACAGGCTACTGCTTGTCTAATAACTT
GTTGGGCTGTTGGAGGGCTTAGATTGCTGATGAGCTCCTCCAGCTCCGGC
AGCACCAGCACTTCAGCTAGCCCGTCCATGACTGTTTTGGTGGAAGAGGA
AAGGGAAGAAGGAGGGAGGAAAAAACATTCTCCCACAGAAGAGGTGGTGG
TGCACGTGGTGGTGGTGTCGGAGGAGGAGGCGGCGGAGGGAAA back to topprotein sequence of jgi.p|Nanoce1779_2|591275 >mRNA_5061-protein ID=mRNA_5061-protein|Name=jgi.p|Nanoce1779_2|591275|organism=Nannochloropsis oceanica|type=polypeptide|length=133bp
MSTCTPPGKQATLLLLLLLLLLLSLLLLSPLPAAAAAAAARPLTTFPWIK
RDLSIDTRGAVSSRTAKHTGPGCNHFTCRGIPKDQGIISIAVDSPFSESS
SSSPCCCFCCIADFFRFLSSVRRRTGGNQAAA* back to topmRNA from alignment at scaffold_12:357076..358668- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_5061 ID=mRNA_5061|Name=jgi.p|Nanoce1779_2|591275|organism=Nannochloropsis oceanica|type=mRNA|length=1593bp|location=Sequence derived from alignment at scaffold_12:357076..358668- (Nannochloropsis oceanica)
TCCACTCATCGTTATGCGCATCTTTTCCGTGGCTGCTTTCTGCAAGTACA
CCAACAATTCATGGGCGGGCAAACAAGGGGTGGAGTTAACCTCGTGTTCC
TCTCGGTCCACTGTGTCCTCGATAACAGCTTGACTTGTGCGGTTGAGAGT
GCGGCTCTCCCAGCCCGAGCGCAACTCCTCCTCCCGCCGCAAGCCCCGAA
AGACGGAAGCAGGAAGAGATTGTCCGTCATCCCCTTCCTCCTTTTTCCTC
CTTTTCTTTCCCATCTCGCCCTTACACTTTCTTGCCATACTTTCTTTGTC
CTCCTTTACCTGCTTCTGGTCCTGCTGTTGCTTTCGCTGTTGCACCAAAA
GCATGGCCTTGAAGAACGCCCGCTCCTTTTCCACTCGAGGAGCCAGCTGA
TTAGGTGCTGCTCCCAAGCTTAGGTCGCACCCACAGTGCTGTGCAATACA
CAGAGTACACACGCGGCAGATGGCGGACTCCACACACACCTGGGCAAAAG
CACAGCCCAACCGCTGCTGATTTCGAAGAGAGGGGTCTGTGGCTGTGCGT
TTGTCATATAAAGGCAAACACCACTCAATTGCTGGCTTAGTGCTATTGCC
GCTGCTATTATTACTGCTGCTGTTTCGGGTAGTGGCTACCAAAGGATTGG
AAGCTGCGAGGCGCCGATTGAGGGCATGGGCACGTGGCACAGCCATAGAC
TCCAACGATGACAATAGATTTTCTAACGCGACCTTGGCGGGAGTACGAGC
AGTAGGAATGGCCGCAGAGCCACCAGTAGAGCAACCAGCTTCAGCTGAAA
GAGGAGGGAGGGGCATGCCGTGCAATTCTTGAGCCAGGGCATCACGGACT
ACCTCACTAGAAAGGACCGACAGGAGCTCTTGGACCACAAGAGGGTGGAT
TGCGACAAAGGTGGGTGACGCAATCTGTGGACGCCCCTTACCCCTAAGCA
TGTCCACATGTACCCCTCCGGGCAAGCAAGCCACGCTGCTGCTGTTGCTG
TTGCTGTTGCTATTGCTGTCGCTACTGCTGCTGTCTCCTCTTCCGGCAGC
CGCAGCAGCAGCAGCAGCACGGCCGTTGACGACGTTTCCTTGGATCAAAA
GGGATTTGAGCATTGACACGAGGGGTGCAGTGAGCTCCCGCACGGCCAAA
CACACCGGACCAGGTTGCAACCACTTTACATGTAGGGGTATCCCTAAGGA
CCAGGGCATCATTTCCATTGCCGTCGACTCTCCCTTCTCCGAGTCCTCAT
CTTCGTCCCCTTGTTGCTGCTTCTGCTGTATCGCTGACTTCTTTCGCTTT
CTCTCCTCGGTTCGCCGTCGAACTGGAGGTAACCAAGCAGCGGCCTGACG
TTCATTATATTTGACTAGAGCGCAACAGGCTACTGCTTGTCTAATAACTT
GTTGGGCTGTTGGAGGGCTTAGATTGCTGATGAGCTCCTCCAGCTCCGGC
AGCACCAGCACTTCAGCTAGCCCGTCCATGACTGTTTTGGTGGAAGAGGA
AAGGGAAGAAGGAGGGAGGAAAAAACATTCTCCCACAGAAGAGGTGGTGG
TGCACGTGGTGGTGGTGTCGGAGGAGGAGGCGGCGGAGGGAAA back to topCoding sequence (CDS) from alignment at scaffold_12:357076..358668- >mRNA_5061 ID=mRNA_5061|Name=jgi.p|Nanoce1779_2|591275|organism=Nannochloropsis oceanica|type=CDS|length=399bp|location=Sequence derived from alignment at scaffold_12:357076..358668- (Nannochloropsis oceanica)
ATGTCCACATGTACCCCTCCGGGCAAGCAAGCCACGCTGCTGCTGTTGCT
GTTGCTGTTGCTATTGCTGTCGCTACTGCTGCTGTCTCCTCTTCCGGCAG
CCGCAGCAGCAGCAGCAGCACGGCCGTTGACGACGTTTCCTTGGATCAAA
AGGGATTTGAGCATTGACACGAGGGGTGCAGTGAGCTCCCGCACGGCCAA
ACACACCGGACCAGGTTGCAACCACTTTACATGTAGGGGTATCCCTAAGG
ACCAGGGCATCATTTCCATTGCCGTCGACTCTCCCTTCTCCGAGTCCTCA
TCTTCGTCCCCTTGTTGCTGCTTCTGCTGTATCGCTGACTTCTTTCGCTT
TCTCTCCTCGGTTCGCCGTCGAACTGGAGGTAACCAAGCAGCGGCCTGA back to top
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