jgi.p|Nanoce1779_2|591253, mRNA_5054 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|591253
Unique Name	mRNA_5054
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	4961
Alignment location	scaffold_12:340517..345477 +

Link to JBrowse

Properties


Property Name	Value
TranscriptId	591339
Track	FilteredModels2
ProteinId	591253

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_12	supercontig	scaffold_12:340517..345477 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

Homology

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|591253	gene_5054	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|591253	mRNA_5054-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS_5054	CDS_5054	Nannochloropsis oceanica (N. oceanica CCMP1779)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at scaffold_12:340517..345477+
coding sequence from alignment at scaffold_12:340517..345477+

mRNA sequence

>mRNA_5054 ID=mRNA_5054|Name=jgi.p|Nanoce1779_2|591253|organism=Nannochloropsis oceanica|type=mRNA|length=4961bp
GTTCTGTCCTTCTCCCCGCCTTCGCTCCCTGTCGCCCATATAACAGTGGC
AGCAACAGCGGCATCAGCAGCAGCAGCAGCAGTAGCAGCAGCAGCAGCCG
TCGCTTGGACACACGAACAGCCGCCCTCTCCACTCCTATCTCAAAGATGC
ACACCAGCAGCAGCAGCTTCCGTAGCAGCGGCATGAGGGCCGACCCGCCC
GCGGCGGGCGCCCCCGCGGGAGCCATCTTCCCTCCGGCCGGGAGCAATGC
CGTTCCCGCAGGATACTCCGTCGCTGAGCCCATCGCCTCCTCAGTCGCAA
CCAAGGCTGCAGGTATGCCTCCCCGACCGGCCGGCGCCATGATCGTGGAG
ATGGGGTCCATGGAAGACCACCACCACAGCGAGACCTCGTCCGCCACCGG
CTCCATCTCCCAGCCCGACCTGGACGTGAATTTCAACGCTGCCATTTACT
CCACCCTCAAGCAGAAAATCCACGACCGGTCCTTCGTTGTGGCTGCGCAG
CTGGCACAACTTTGCTACTTGACCTGGCGTTGGTACTACTTTCTAATTAC
CCCCTCTACGCTCTACGTATCCTTGCCCTTTATTATTGCCGAGACGATGA
TCGTGCTTGGCGGTTCTTTCATCACCTACTTCTTGGTGTGGAACCAATGC
AAGCGGCCCAAACTCCGCCTCGTGGACCTGAAATTGGAACGGCGCGAGCT
GCCCACCGTGGATGTGATGATTCCTTGCTATAATGAGCCGGTGGAGATTG
TGCGGCAGACGACGCTAGCAGCCTTGGCTATGGACTACCCCAAGGAGAAG
CTTGCAGTCATTGTCTGCGATGATGGGAATTCATCGGCCATGCGCGCGTT
GATTGCACAGTTGCGGGCAGATATGGGAGGGAGTAAGGCGACGTTGCGGT
ACATCGCCCGGAAGAAGATTCCCGGTGTCCCTCACCACGCCAAGGCTGGG
AATATCAACAATGCCTTGATGAACGAGGGCACGAGCGGGGATTTCATTGT
GATTTTCGACTGTGACATGATTTGTCGCCCCGAGTATTTGCAGTGTGTTT
TGCCGCATTTTTACAAGCTGGAGGCAGATGCCCTGGTGGTGGATGAGCGC
ATCGCCATGGTCCAGACACCGCAGGCCTTCGTGAATGTCCCTGAGGACGA
CCCTCTTGGTCAGCAGTACCGATATTTCTACGGTCCCGTCCTGCATGGGT
GGGACGCGGTGGATTCGACGCCATGCTGTGGCACCAATGTGACCTTCTCC
CGCAAGGCCTTGTTGTCTGTGGGGGGATTTACTTACGGAAGCATTACGGA
GGATTTCCTGACGTCGATGACGCTGCACTCGCACGGTTTCAAGACAAAGT
ACATCCACGAATATTTGGCCAAGGGTCTCTCACCTGAAAGTGTGCATGAC
TTTATGAAACAGCGCTTTCGATGGGCGGCGGGTGGATTGGAGATTTTTGT
GCGGAACAACGCCTTGTTCAAGCGGGGCCTGTCGCCGACGCAGAAGTTTT
TGTACTTTTGGGCTGGATTCAACACGTGCTTGTCGATCCCGATGGTGTAC
CTGATCTATTGCCCCATCATTTACCTGCTCGGCCAGTCAAGAGTGCAGAT
TGCGACATTTGACACGATTGAGTATTTTGTGTTCTTCCTGCCGTACATGT
TTTTGCAACTGTGCTGCATGCGCATTTCGTACCGCGACGTGCCGTCGATT
TACTTGCGTCGGTCGTTGCAAGAGTCCGTGTTTATGCTGTTCTGCTATGC
GCGCGCTGTGATCACGGTGGTGGTAGGGTTTAAGTTGGGGTTCAAGGTGA
CGAGCAAGGACGCCGAGGCGAGCGAATTCCGGAAAAGCTTCAACTGGTGC
ATTCCCTACGTCATCTACTACTTCCTCGGCTCCATGTCCTTGGGCTTCGG
GGTTTTGAACATGTACCGCGCCTTCCAAGCCCCAGACCACTCCCCCAAAT
CGATGGCCGCCGTGGCCGTCTCCCTGTTTTGGATTGTTTTCATCATGTGG
CAGATGTGGCCCCCCATCGGCTACCTCCTTCGTTGTCTCGACCCCAGTCC
TCAAGTAGAAAAGGCTTCTCCAACACTCGGGTCTTCTTCAGGGGCTTTCT
CCACTCCTGCTCCCGCGGGTGCCGTTGGTGTTCTCCCGGCAGCGGCGCAT
GTGTCAGTCTAAGCCGAGAGAGGGAGAGGGGGAAGGGAAGGGGGAAGGGA
AATGCAGAGAAGGAAACGATAGTTTTGAAAAGGGGTAATGAAATGATGAC
CTCCCCATCATTTCCTCCCCATTCGTCGTCTTGAGTGCTTTCCCCCCTTT
TTCCCCTCACTCCCTGTGTGTGTTTCGATATTGAGCAAGCCAAACCCTAG
CCATTGAGAGACTATAGATATACTTATTATTGCATTTACTTTTTTATCAT
CCGAGCGAGCGTAAACAGAGCAGCAGCAGCTGCGGCTGCAGTAGTAGTAG
TCTGATAGCGGGGAAGAATAGTAAAGGAGGAAGGGAGGAAGGAAGGAAGG
AAGGCAGGAAGGAAGGGTGGAAGGGAGCAAGAGATGGGGATTTTTTTGTT
GATAGAAAACGGTATCCTTGATTTCTGTATATTATTTACATAGGATGAAC
CGAGGAAAGATAAAGGGATGAGAGAGAAGCTAAGTAAGGGTTTGTGGACC
ATGCAAATGGGTGAATACAGAGGAGAAGGCGCGGTGGTCAGGTCTTCCTG
AGAGGAGTTTGGCAATCAGCGAATGCAGACCTATTAGAATAGGGAACTGT
GGCTTTGGACCGAGAGGAGAAATAGAGAGAGAATTTGGGTGGTTTTATGT
GTGTTTGCGTGGTGGTCAGGCAGGCGAGCCATTTTAGATGGCTCTCGTTT
GCACAGCCACTGCCTCTGATGCTCGTAGCAACACATTAAGAGTGCAGACA
AGGAGCAGGTGTGACAGCACGCAGCAGCAGAGCGAGAGTCTAGATCTTTA
TGTCGGCACCAGGAAGCAATTCTATAAGAAAAGAGGGAGCGGGGGGCTCT
AATCAGTCGTGATCGTGTCCCTCAAGTCGTTTTATGTAAGTGTATATGTG
TGTGTATGTGTGTGTGCGCGCGTGTATGGGGATATATTTGTGTGTAGATG
TTGTGGTCTACGACATCAAAAACTGAAAAATCAACAATAACAAAACCAAA
ACAACAACGATGACCACAACACCAAAATGATCACCACGAACATGCCAGGG
CGTGTTATCGTCTCAAATGCGTCCATGTCTAAGAGGGATAGAACGTGAAA
GGGAGTGTGCGAGAGAAAGGGAGAGCGAGCACACCAAGATTAGCGATAAA
CGAGGGAGTATTGATGCACAGGAGTACCCCCAAAATGAAGTCCCAGCCCC
CTTCATTTTGATGGGGCCGCAAATGCAGCTCCTGCTTAAGCGTTGAACAC
ACAGGGCGGGAGCGTTGGATGGGGATATATATGCAAGTGGGGGAATGAGG
AGTTTTTGAGGAAGACGTTTTGTGTTACCCAGGGGATTCGCACAACGCTT
ACCATAACAACAAGAACAAATATTATGGTCAGTCAAAGGGGTTTAAAGGG
GAAATTGATAGTGAAAGAGAAGAGTGGACGAATGATTTGAAAAGACACAT
TCAAGGAGTGAAGGAGCGAAGGAGCGAAGGAGCGACGAGGACAATTTGTG
GGAGGAAAGAACGCCAGAGTTATCGAGACAAAGGACGAAAGAAAGCAACC
ATTGCATCACAACCGTCTTACCAGAGACGCAGCAGCAAACGAGTAACCAA
AGAATGGGGAAATGTGTAGAATGATCAAAAGGGGAGCGAACGAAAGGGGA
AAAGGGAAAGGGAGATACAGGGGAAATAAGTGATGATTCTTATAGGGAGG
TGAAAGGTGATATATATCTAGGTTGGGGGGTGAGATGATCAATTATATGG
ACAGCCGCACACACGGGTCGAGAACGATAGAGAGATAAAGAAAGGGAAAG
CGAAAAGGGGGAGGCCAACGCGCATGTTGGCGACAGGACACACAAGCGAC
AAGCAGGCGGGTCAGACAGGCGATGCAGACGACCTGAGAGACTAGAAGAA
GTCAGAGTCGAAGAGCTATATCTCTCTCTACTCCGTCCGCTTAACATTGC
GTGATGTAATCCTGTAAATGTTGTCGTGGTGTGTCGTAACTCGCCTGCGG
TGTGTGTCCCCTCCTAGACGGTCCATCAGCGGGGAGATAGTGTTGTGTGC
GCCGCATTCGGTGTTTTTTTTTTTCCTTCATTTTTACCACGTTTGACTCC
CTCGTCCTCTTAGTAACAACAGGGATAAAACAACCCCCAAACCCCAAAAG
AATCATGAGCGTCAGAAGTCCTGGGGGAAAACGACTCATAACGCCTACGG
CTGCTCTATTCGCTTCGCCACCAGAATGGGTGAATGTATTTTGTGAGGTC
GGGACAAGTGTACCTGCTTACCTCGTTTGCTCTCCTTCTTTCTTTTTCAT
CATCATCAAACCACCCTCTTCATCCCTCTTTCCCTTGTCTCTGCGACACC
CAAATCCAGGGATTTGTTTTTTGAAGTATTCCGGTAGAATTGTGTATATC
TTCTCCCTAAGCCTGCCTTTTCTTCATTTCTACTCCCTTCGACATCACGT
CCCATGCGCCCCCCCCCCTCAACATACGTACACATGTGCCACGCCCCCAA
TATATTAATCCAAACCTTTTCTTCAGCAACCAGCACCCCCTCTCAACCTC
CTCCGGCGTTTGACAATTTATCTTACCTTCATCCGGTTTCCCTCCCCCTC
CTTTTCCTCTTTTTCCTCCTCCTCCATTTTCCCCTTCTCTTCCTTCGCGT
ACGTACAAGATACCCCATATTCCTCATTGACTTTTATCCAACCCATCCCT
TCCTCCCTCCGTTCCTCCCTCCCTTTCTCCCTCCCTCCCAGCCACCCTCC
GCTATTAATTAATTGGCCTCACCCTGCCTCCACCCGCTCCTGTGCCCTTT
CCCCCCGACGA

protein sequence of jgi.p|Nanoce1779_2|591253

>mRNA_5054-protein ID=mRNA_5054-protein|Name=jgi.p|Nanoce1779_2|591253|organism=Nannochloropsis oceanica|type=polypeptide|length=672bp
MHTSSSSFRSSGMRADPPAAGAPAGAIFPPAGSNAVPAGYSVAEPIASSV
ATKAAGMPPRPAGAMIVEMGSMEDHHHSETSSATGSISQPDLDVNFNAAI
YSTLKQKIHDRSFVVAAQLAQLCYLTWRWYYFLITPSTLYVSLPFIIAET
MIVLGGSFITYFLVWNQCKRPKLRLVDLKLERRELPTVDVMIPCYNEPVE
IVRQTTLAALAMDYPKEKLAVIVCDDGNSSAMRALIAQLRADMGGSKATL
RYIARKKIPGVPHHAKAGNINNALMNEGTSGDFIVIFDCDMICRPEYLQC
VLPHFYKLEADALVVDERIAMVQTPQAFVNVPEDDPLGQQYRYFYGPVLH
GWDAVDSTPCCGTNVTFSRKALLSVGGFTYGSITEDFLTSMTLHSHGFKT
KYIHEYLAKGLSPESVHDFMKQRFRWAAGGLEIFVRNNALFKRGLSPTQK
FLYFWAGFNTCLSIPMVYLIYCPIIYLLGQSRVQIATFDTIEYFVFFLPY
MFLQLCCMRISYRDVPSIYLRRSLQESVFMLFCYARAVITVVVGFKLGFK
VTSKDAEASEFRKSFNWCIPYVIYYFLGSMSLGFGVLNMYRAFQAPDHSP
KSMAAVAVSLFWIVFIMWQMWPPIGYLLRCLDPSPQVEKASPTLGSSSGA
FSTPAPAGAVGVLPAAAHVSV*

mRNA from alignment at scaffold_12:340517..345477+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_5054 ID=mRNA_5054|Name=jgi.p|Nanoce1779_2|591253|organism=Nannochloropsis oceanica|type=mRNA|length=4961bp|location=Sequence derived from alignment at scaffold_12:340517..345477+ (Nannochloropsis oceanica)
GTTCTGTCCTTCTCCCCGCCTTCGCTCCCTGTCGCCCATATAACAGTGGC
AGCAACAGCGGCATCAGCAGCAGCAGCAGCAGTAGCAGCAGCAGCAGCCG
TCGCTTGGACACACGAACAGCCGCCCTCTCCACTCCTATCTCAAAGATGC
ACACCAGCAGCAGCAGCTTCCGTAGCAGCGGCATGAGGGCCGACCCGCCC
GCGGCGGGCGCCCCCGCGGGAGCCATCTTCCCTCCGGCCGGGAGCAATGC
CGTTCCCGCAGGATACTCCGTCGCTGAGCCCATCGCCTCCTCAGTCGCAA
CCAAGGCTGCAGGTATGCCTCCCCGACCGGCCGGCGCCATGATCGTGGAG
ATGGGGTCCATGGAAGACCACCACCACAGCGAGACCTCGTCCGCCACCGG
CTCCATCTCCCAGCCCGACCTGGACGTGAATTTCAACGCTGCCATTTACT
CCACCCTCAAGCAGAAAATCCACGACCGGTCCTTCGTTGTGGCTGCGCAG
CTGGCACAACTTTGCTACTTGACCTGGCGTTGGTACTACTTTCTAATTAC
CCCCTCTACGCTCTACGTATCCTTGCCCTTTATTATTGCCGAGACGATGA
TCGTGCTTGGCGGTTCTTTCATCACCTACTTCTTGGTGTGGAACCAATGC
AAGCGGCCCAAACTCCGCCTCGTGGACCTGAAATTGGAACGGCGCGAGCT
GCCCACCGTGGATGTGATGATTCCTTGCTATAATGAGCCGGTGGAGATTG
TGCGGCAGACGACGCTAGCAGCCTTGGCTATGGACTACCCCAAGGAGAAG
CTTGCAGTCATTGTCTGCGATGATGGGAATTCATCGGCCATGCGCGCGTT
GATTGCACAGTTGCGGGCAGATATGGGAGGGAGTAAGGCGACGTTGCGGT
ACATCGCCCGGAAGAAGATTCCCGGTGTCCCTCACCACGCCAAGGCTGGG
AATATCAACAATGCCTTGATGAACGAGGGCACGAGCGGGGATTTCATTGT
GATTTTCGACTGTGACATGATTTGTCGCCCCGAGTATTTGCAGTGTGTTT
TGCCGCATTTTTACAAGCTGGAGGCAGATGCCCTGGTGGTGGATGAGCGC
ATCGCCATGGTCCAGACACCGCAGGCCTTCGTGAATGTCCCTGAGGACGA
CCCTCTTGGTCAGCAGTACCGATATTTCTACGGTCCCGTCCTGCATGGGT
GGGACGCGGTGGATTCGACGCCATGCTGTGGCACCAATGTGACCTTCTCC
CGCAAGGCCTTGTTGTCTGTGGGGGGATTTACTTACGGAAGCATTACGGA
GGATTTCCTGACGTCGATGACGCTGCACTCGCACGGTTTCAAGACAAAGT
ACATCCACGAATATTTGGCCAAGGGTCTCTCACCTGAAAGTGTGCATGAC
TTTATGAAACAGCGCTTTCGATGGGCGGCGGGTGGATTGGAGATTTTTGT
GCGGAACAACGCCTTGTTCAAGCGGGGCCTGTCGCCGACGCAGAAGTTTT
TGTACTTTTGGGCTGGATTCAACACGTGCTTGTCGATCCCGATGGTGTAC
CTGATCTATTGCCCCATCATTTACCTGCTCGGCCAGTCAAGAGTGCAGAT
TGCGACATTTGACACGATTGAGTATTTTGTGTTCTTCCTGCCGTACATGT
TTTTGCAACTGTGCTGCATGCGCATTTCGTACCGCGACGTGCCGTCGATT
TACTTGCGTCGGTCGTTGCAAGAGTCCGTGTTTATGCTGTTCTGCTATGC
GCGCGCTGTGATCACGGTGGTGGTAGGGTTTAAGTTGGGGTTCAAGGTGA
CGAGCAAGGACGCCGAGGCGAGCGAATTCCGGAAAAGCTTCAACTGGTGC
ATTCCCTACGTCATCTACTACTTCCTCGGCTCCATGTCCTTGGGCTTCGG
GGTTTTGAACATGTACCGCGCCTTCCAAGCCCCAGACCACTCCCCCAAAT
CGATGGCCGCCGTGGCCGTCTCCCTGTTTTGGATTGTTTTCATCATGTGG
CAGATGTGGCCCCCCATCGGCTACCTCCTTCGTTGTCTCGACCCCAGTCC
TCAAGTAGAAAAGGCTTCTCCAACACTCGGGTCTTCTTCAGGGGCTTTCT
CCACTCCTGCTCCCGCGGGTGCCGTTGGTGTTCTCCCGGCAGCGGCGCAT
GTGTCAGTCTAAGCCGAGAGAGGGAGAGGGGGAAGGGAAGGGGGAAGGGA
AATGCAGAGAAGGAAACGATAGTTTTGAAAAGGGGTAATGAAATGATGAC
CTCCCCATCATTTCCTCCCCATTCGTCGTCTTGAGTGCTTTCCCCCCTTT
TTCCCCTCACTCCCTGTGTGTGTTTCGATATTGAGCAAGCCAAACCCTAG
CCATTGAGAGACTATAGATATACTTATTATTGCATTTACTTTTTTATCAT
CCGAGCGAGCGTAAACAGAGCAGCAGCAGCTGCGGCTGCAGTAGTAGTAG
TCTGATAGCGGGGAAGAATAGTAAAGGAGGAAGGGAGGAAGGAAGGAAGG
AAGGCAGGAAGGAAGGGTGGAAGGGAGCAAGAGATGGGGATTTTTTTGTT
GATAGAAAACGGTATCCTTGATTTCTGTATATTATTTACATAGGATGAAC
CGAGGAAAGATAAAGGGATGAGAGAGAAGCTAAGTAAGGGTTTGTGGACC
ATGCAAATGGGTGAATACAGAGGAGAAGGCGCGGTGGTCAGGTCTTCCTG
AGAGGAGTTTGGCAATCAGCGAATGCAGACCTATTAGAATAGGGAACTGT
GGCTTTGGACCGAGAGGAGAAATAGAGAGAGAATTTGGGTGGTTTTATGT
GTGTTTGCGTGGTGGTCAGGCAGGCGAGCCATTTTAGATGGCTCTCGTTT
GCACAGCCACTGCCTCTGATGCTCGTAGCAACACATTAAGAGTGCAGACA
AGGAGCAGGTGTGACAGCACGCAGCAGCAGAGCGAGAGTCTAGATCTTTA
TGTCGGCACCAGGAAGCAATTCTATAAGAAAAGAGGGAGCGGGGGGCTCT
AATCAGTCGTGATCGTGTCCCTCAAGTCGTTTTATGTAAGTGTATATGTG
TGTGTATGTGTGTGTGCGCGCGTGTATGGGGATATATTTGTGTGTAGATG
TTGTGGTCTACGACATCAAAAACTGAAAAATCAACAATAACAAAACCAAA
ACAACAACGATGACCACAACACCAAAATGATCACCACGAACATGCCAGGG
CGTGTTATCGTCTCAAATGCGTCCATGTCTAAGAGGGATAGAACGTGAAA
GGGAGTGTGCGAGAGAAAGGGAGAGCGAGCACACCAAGATTAGCGATAAA
CGAGGGAGTATTGATGCACAGGAGTACCCCCAAAATGAAGTCCCAGCCCC
CTTCATTTTGATGGGGCCGCAAATGCAGCTCCTGCTTAAGCGTTGAACAC
ACAGGGCGGGAGCGTTGGATGGGGATATATATGCAAGTGGGGGAATGAGG
AGTTTTTGAGGAAGACGTTTTGTGTTACCCAGGGGATTCGCACAACGCTT
ACCATAACAACAAGAACAAATATTATGGTCAGTCAAAGGGGTTTAAAGGG
GAAATTGATAGTGAAAGAGAAGAGTGGACGAATGATTTGAAAAGACACAT
TCAAGGAGTGAAGGAGCGAAGGAGCGAAGGAGCGACGAGGACAATTTGTG
GGAGGAAAGAACGCCAGAGTTATCGAGACAAAGGACGAAAGAAAGCAACC
ATTGCATCACAACCGTCTTACCAGAGACGCAGCAGCAAACGAGTAACCAA
AGAATGGGGAAATGTGTAGAATGATCAAAAGGGGAGCGAACGAAAGGGGA
AAAGGGAAAGGGAGATACAGGGGAAATAAGTGATGATTCTTATAGGGAGG
TGAAAGGTGATATATATCTAGGTTGGGGGGTGAGATGATCAATTATATGG
ACAGCCGCACACACGGGTCGAGAACGATAGAGAGATAAAGAAAGGGAAAG
CGAAAAGGGGGAGGCCAACGCGCATGTTGGCGACAGGACACACAAGCGAC
AAGCAGGCGGGTCAGACAGGCGATGCAGACGACCTGAGAGACTAGAAGAA
GTCAGAGTCGAAGAGCTATATCTCTCTCTACTCCGTCCGCTTAACATTGC
GTGATGTAATCCTGTAAATGTTGTCGTGGTGTGTCGTAACTCGCCTGCGG
TGTGTGTCCCCTCCTAGACGGTCCATCAGCGGGGAGATAGTGTTGTGTGC
GCCGCATTCGGTGTTTTTTTTTTTCCTTCATTTTTACCACGTTTGACTCC
CTCGTCCTCTTAGTAACAACAGGGATAAAACAACCCCCAAACCCCAAAAG
AATCATGAGCGTCAGAAGTCCTGGGGGAAAACGACTCATAACGCCTACGG
CTGCTCTATTCGCTTCGCCACCAGAATGGGTGAATGTATTTTGTGAGGTC
GGGACAAGTGTACCTGCTTACCTCGTTTGCTCTCCTTCTTTCTTTTTCAT
CATCATCAAACCACCCTCTTCATCCCTCTTTCCCTTGTCTCTGCGACACC
CAAATCCAGGGATTTGTTTTTTGAAGTATTCCGGTAGAATTGTGTATATC
TTCTCCCTAAGCCTGCCTTTTCTTCATTTCTACTCCCTTCGACATCACGT
CCCATGCGCCCCCCCCCCTCAACATACGTACACATGTGCCACGCCCCCAA
TATATTAATCCAAACCTTTTCTTCAGCAACCAGCACCCCCTCTCAACCTC
CTCCGGCGTTTGACAATTTATCTTACCTTCATCCGGTTTCCCTCCCCCTC
CTTTTCCTCTTTTTCCTCCTCCTCCATTTTCCCCTTCTCTTCCTTCGCGT
ACGTACAAGATACCCCATATTCCTCATTGACTTTTATCCAACCCATCCCT
TCCTCCCTCCGTTCCTCCCTCCCTTTCTCCCTCCCTCCCAGCCACCCTCC
GCTATTAATTAATTGGCCTCACCCTGCCTCCACCCGCTCCTGTGCCCTTT
CCCCCCGACGA

Coding sequence (CDS) from alignment at scaffold_12:340517..345477+

>mRNA_5054 ID=mRNA_5054|Name=jgi.p|Nanoce1779_2|591253|organism=Nannochloropsis oceanica|type=CDS|length=2016bp|location=Sequence derived from alignment at scaffold_12:340517..345477+ (Nannochloropsis oceanica)
ATGCACACCAGCAGCAGCAGCTTCCGTAGCAGCGGCATGAGGGCCGACCC
GCCCGCGGCGGGCGCCCCCGCGGGAGCCATCTTCCCTCCGGCCGGGAGCA
ATGCCGTTCCCGCAGGATACTCCGTCGCTGAGCCCATCGCCTCCTCAGTC
GCAACCAAGGCTGCAGGTATGCCTCCCCGACCGGCCGGCGCCATGATCGT
GGAGATGGGGTCCATGGAAGACCACCACCACAGCGAGACCTCGTCCGCCA
CCGGCTCCATCTCCCAGCCCGACCTGGACGTGAATTTCAACGCTGCCATT
TACTCCACCCTCAAGCAGAAAATCCACGACCGGTCCTTCGTTGTGGCTGC
GCAGCTGGCACAACTTTGCTACTTGACCTGGCGTTGGTACTACTTTCTAA
TTACCCCCTCTACGCTCTACGTATCCTTGCCCTTTATTATTGCCGAGACG
ATGATCGTGCTTGGCGGTTCTTTCATCACCTACTTCTTGGTGTGGAACCA
ATGCAAGCGGCCCAAACTCCGCCTCGTGGACCTGAAATTGGAACGGCGCG
AGCTGCCCACCGTGGATGTGATGATTCCTTGCTATAATGAGCCGGTGGAG
ATTGTGCGGCAGACGACGCTAGCAGCCTTGGCTATGGACTACCCCAAGGA
GAAGCTTGCAGTCATTGTCTGCGATGATGGGAATTCATCGGCCATGCGCG
CGTTGATTGCACAGTTGCGGGCAGATATGGGAGGGAGTAAGGCGACGTTG
CGGTACATCGCCCGGAAGAAGATTCCCGGTGTCCCTCACCACGCCAAGGC
TGGGAATATCAACAATGCCTTGATGAACGAGGGCACGAGCGGGGATTTCA
TTGTGATTTTCGACTGTGACATGATTTGTCGCCCCGAGTATTTGCAGTGT
GTTTTGCCGCATTTTTACAAGCTGGAGGCAGATGCCCTGGTGGTGGATGA
GCGCATCGCCATGGTCCAGACACCGCAGGCCTTCGTGAATGTCCCTGAGG
ACGACCCTCTTGGTCAGCAGTACCGATATTTCTACGGTCCCGTCCTGCAT
GGGTGGGACGCGGTGGATTCGACGCCATGCTGTGGCACCAATGTGACCTT
CTCCCGCAAGGCCTTGTTGTCTGTGGGGGGATTTACTTACGGAAGCATTA
CGGAGGATTTCCTGACGTCGATGACGCTGCACTCGCACGGTTTCAAGACA
AAGTACATCCACGAATATTTGGCCAAGGGTCTCTCACCTGAAAGTGTGCA
TGACTTTATGAAACAGCGCTTTCGATGGGCGGCGGGTGGATTGGAGATTT
TTGTGCGGAACAACGCCTTGTTCAAGCGGGGCCTGTCGCCGACGCAGAAG
TTTTTGTACTTTTGGGCTGGATTCAACACGTGCTTGTCGATCCCGATGGT
GTACCTGATCTATTGCCCCATCATTTACCTGCTCGGCCAGTCAAGAGTGC
AGATTGCGACATTTGACACGATTGAGTATTTTGTGTTCTTCCTGCCGTAC
ATGTTTTTGCAACTGTGCTGCATGCGCATTTCGTACCGCGACGTGCCGTC
GATTTACTTGCGTCGGTCGTTGCAAGAGTCCGTGTTTATGCTGTTCTGCT
ATGCGCGCGCTGTGATCACGGTGGTGGTAGGGTTTAAGTTGGGGTTCAAG
GTGACGAGCAAGGACGCCGAGGCGAGCGAATTCCGGAAAAGCTTCAACTG
GTGCATTCCCTACGTCATCTACTACTTCCTCGGCTCCATGTCCTTGGGCT
TCGGGGTTTTGAACATGTACCGCGCCTTCCAAGCCCCAGACCACTCCCCC
AAATCGATGGCCGCCGTGGCCGTCTCCCTGTTTTGGATTGTTTTCATCAT
GTGGCAGATGTGGCCCCCCATCGGCTACCTCCTTCGTTGTCTCGACCCCA
GTCCTCAAGTAGAAAAGGCTTCTCCAACACTCGGGTCTTCTTCAGGGGCT
TTCTCCACTCCTGCTCCCGCGGGTGCCGTTGGTGTTCTCCCGGCAGCGGC
GCATGTGTCAGTCTAA

Synonyms

Publications