jgi.p|Nanoce1779_2|591172, mRNA_5029 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|591172
Unique Name	mRNA_5029
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	5034
Alignment location	scaffold_12:278258..283674 +

Link to JBrowse

Properties


Property Name	Value
TranscriptId	591258
Track	FilteredModels2
ProteinId	591172

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_12	supercontig	scaffold_12:278258..283674 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

Homology

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|591172	gene_5029	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|591172	mRNA_5029-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS_5029	CDS_5029	Nannochloropsis oceanica (N. oceanica CCMP1779)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at scaffold_12:278258..283674+
coding sequence from alignment at scaffold_12:278258..283674+

mRNA sequence

>mRNA_5029 ID=mRNA_5029|Name=jgi.p|Nanoce1779_2|591172|organism=Nannochloropsis oceanica|type=mRNA|length=5034bp
ACAGAGACTAGCACGTGTCATTTAGGTGCCGTTGGTGTCGTTAAGATTCC
TACAACAGCATACGACGACGACCACGTCGAACCATCGAGCCCGCCAATGA
CAAGCAGCATATAAGGGGGCATTCGATAGGCACAACAGCTCAAACGGATG
GCTAGGTTACCGCCAGATGTGGAGAGTGGCGGTGGCGAAGCCAACATAAG
CGCCAGCAGCAGTAGCACCAGCACTAGCACCAGCATGGAGCACTATAGAC
GGAGGCAACGACCATGGTCATCGACTTGCAACAGCTCCATCGGCAGCGAT
GCGAATTTGACCGGTGATAGAAGCAGTAGCGGCAGCAGCAGGAACAGGGA
CGAAGACAGGATACCTCATCCACCACCCCACTCATGTGGTTTCCCTCGCC
GTCGAACCAAGTTCCTCTTTTCCTCCGTACTCCTCCCCTCTCTCCTTCTC
CTCCTCCTCGTCCCCTTCCCACCATTTACCGAAGCATTCAACCTCCTCCA
CAAACTCCCCACATTTCGTCATCACCTTTTCTTTCAACCCGCCACTCCCG
CGCCATCTGAAGGAGGGGGGAGCAATCCGCTCTCCACGAGCACCTACCTG
ACCCCGGGGGGGGATAGTGGGGGAGCAGGCCCGGACGAGCAGCATTTGTC
GGGAGGTTCCTCCCTTGTTGATATCGCGCGTCGTCGCTTTTGGCGGTGGA
CCGTGTGGCGGAGGCTGTATCATTCATCGGTTGTCACTGTATTAAAGCAG
CAGAGCACCCCTCTGGCGTCCTTCTTCTCGCCTCCCATGTTCACGCCCCG
GAGACGATCCAGTCTTGACTCTACCTACACGAAACCGACCCCATTCCTGT
TTTCTACCCCCGATGCCGGGCCTGTGATCGTTGCTTCATCTTCCACCGCA
TTCAATTCTGTGCACCTGGTGACACGTGCAGCAGCGCCGGAGCAGAAGTC
TTTGGTGTATGTGAATGGGACTGAGGTTTCGGGACACCTGAAGTCCGGGG
TGGTGTTGCCTTCCCCTCCCTCACGGTTTCAGCAGACATATAGAAGTAGC
AAAACGGCGAAAGGTGAGGGTGGAGATGTAGTGGTAGATCCCCGGGCGCC
GCTGAGCTTGAGTCTGATGGGAGAGTTTTGCATTGACAAGCCCGCATACT
TACACATCGCCCCGACCAAGGCGGGGACCACGCCGTTGCTGTGGGTGACG
CAGTTCAGTCTCACTCGACGAGGGTCCATCAGTGGGATCAATATATTTGG
GAAGGGCCGGTCGTCGGTTGGGTCCACATGTCAGAAGATGTCGTCGCCCT
CCCTCCCTCGCTCGACCTCGCCTTCCTCGAAGCCAGTGGCGCTCTCATCA
CCACCACAGCAGCAGCGACAGCAGCCGCAACGGCCTCATGCCCAAGCCTC
CGCCCAACTTCACCCCCCGCCTCCCTCCACCCTCCTCCTCCAAGACCAGC
AACCCCCGCCGTCCCTCTCCTCCTCCTCCCCCTCCTCCTCCTCCTCCTCT
TCCAACCCCATCCCGGAAGAAATGAAACTCGGTTTCTCCTTCCGCTGGCC
CAACGAAGTTTACAACCTACCTCCGCACACCATCACGGGCTGTAGTGACG
AGGCCCTCCTGGTGGCGGACGGTTTTTTGATGCCCGGGCGGTCGGACGGT
GGGCTGTACGTCGTGCAGGACCCCGGCAAACCCTCGGAGAAAGTCACGAG
CTTAACACGGCACAAACCGGGGTGGTTCTATCACAAGGCAACGTGGGTCG
ATCTTTTGGGGCCAGGGGGGCGACCGTGCCTCCTGACTGCGCGGGCGACG
AAACCGTTTTTCGCGCAGACGGAGGGTGAGCTGGTGTTGCTGATGCAGCC
GGAGGGGCCTTTCCCTCTGGCGGAATGGAACACGCCCTGGGAGGAGGTGG
TGCTCGTCAAGGGCCCGGACGTGATGTTCGATGTGGTGGACTTGGACCCC
GAGGACGACGTTCTCGAAGTGTTTGCTGCCGAGTTTTTCAGCCGGAGACT
GACGTTGCATCGGTTGAGGAAGGGTGATTGGAAAACGGGACGGAAGCCGA
GGGTGCTGACAAGTGAGGTGTTGGACCATGCGCTGGGTCCGGCGTACAGC
GTGGTGTTGGCCGACTTGAAGGGGTACGGGAAACCCTCGCACGTATTGGT
GTCGAGTCATGAGTGTCAGTATGAGGGGTTGGTGGAAGGAGGGAGAAAAG
AGGAAGTGGAGGGGAGCGGGGTGACCACGGCGGTTGCGGGAGCAGACTTA
CTTGCTGCTAGTGAGAAATTTGCGGGGCCAGGCTTGCAGGGTATGGCGGC
GCGGGCGGCAGTGCTTGGGAGTAGCAACAGTGGTAGTGGGAGCGGAATGG
GAGCGGAGGAGGAGGGGTTGAAAGGCGGGTCGTTGTTTGCGTACGAAATC
CCCTCTAAATGGCGTGAACGCGTGCCGTGGAAAAGGAGCACCCTGGCCAC
GGGTTTCCACGTCAAGAGCTGGGGCCAGATTAATCCAGGAGCCCCTGGAT
TCCCTTATGTCTTTTATCCGCACCGCTCTTTGAGAGGACAAGCCGGGCAG
CGACCGTACATCCTGCTTGCGGGCGATTGTTCGCATGCTGCTTACATCTA
TCGACCTGTGGGGGCTCATGCGGGGGAGGGAGGGGGAGGGGAGGAGGAAA
TCGATGTGAGGTATGAGCCAATGGCACAGATAAATTGTGGAGGGACCGTC
GGGTCGCTAGCAGTCGGGCATTTGCCCTTGGCAGTGGGAGGGGAAGATGA
AGGGGGGGAGGAAGGAGAGGAGGAGGGGGATGGCTGGGCGAAGATATTCA
TTCCCAATTTTGACACGGACAAGGTATACGCGTTCTCGTTTGGGCCTGAG
AAGGCCTCGCCTCAGGTCTGCCTTGGGTTAGACCCTCTGTCCGTGCCCTC
AGAAAGGTACCAGCGGTTGGAGGTGGAGAGAAAGGCCAGGGTGGCGGAAG
AAGATGAGATTGTGGGCGCGATAAACACGTATGCGAAGACACGGGGGGAT
AAGACTAAGATCTCGTAAGATGAGGATGAATGAATGAATGAAGGGAAAGG
GCGACGGGTGTATAGATCAGTTAAGGGACTGCAAATGAAGCAGAGGAGGG
AAAGAAGAGGGGGGGGGGTTGACGGAAGGAAGGAAGTAGGGTAATAGACG
GCTAGACTGTGTGTAAGATAACTCGTGAACAATGCAAGCGATACCCTGTG
CGTGGGGGGCTGTGGAGGATGCTTTTTGGGGGTAGGAAATGGTGACCTCC
GGATTTATAAGGAGGGAAGGCATGTAATGATTACGAAAATGGAAGAGGAA
GGGATAGAGACTAAGAAAATTAGATGGAGATGGAGAAAACAAGGAAATTC
AAGCTCAAAGACAATCAAAAGAACGAAAGGCACGCAAGTAGACAACGCAA
CCAAGGAGGTCGACCATATTGTTTGTCGCTTTACCTTAAAATGGAAGCAT
AGAAGCGTCACGTGCGTTTGATTTCTTGCTTGGTTTCTTATTTTGTCTTT
TTACATAATCCCTGCGCCTGAGAGTGAGGAAAAGTGTGTGCGCAACGATG
TGTATAGGGGTGATGCGAAGCGACTGGTCGCCCATTTTATCTACTTATAA
TTTGAATGTCCCGAAGACTAGGAAGATACATTGATTGCTAGATCTATGTG
CTTAAATAAAGAGACCTGTACATGCTAGCCACGAAGTGACGCTTTATGCT
CTGTATGCAGAACAAATCAAACAGCAGCTCACATACCCCCCCCCCTCGCC
TTCAAACTTTGCGATGATAAATGTGTCTTTATGTCCTTTGTAATTGTATG
GTCATATATTTCCAACGCAAAATGTTGTTGTCTTGTCAGTATCGTACCTA
TGGCATCCTCTTCTGGTGCACCTGCAACCCCACTCACTTGAAGTGCTTTT
CTCTCTAATTGTTCCTCCCCTCTGCATCGCCCAACACTTGTTGTGTGATA
TTTCTGGCAAAATTCTGTTTTTGTACACCGTCGTTACAGATCATTCGCTC
CCTCATATGGATCCGTCAGCTGTATGCTATAAGGGCGTGACGCGTTTAAA
ACATTTCTCTCAAGTGGTGCCTTGCTTTACGCCATGGCGGGCTTTAAAAA
CACGCTTGTCGATCTCCTCCCGGAGCGCGCGAACGTCGTCATGGTTGTAG
CCGGCAAATTTGGCCACCAGCCTGGGAATAAGGAGAATAATGGAAGAAGA
GGGGGAAGGAGGGCGGAAGTTTAGAATGAGGAGAGGGGCCTCGTATTCTT
TCTTCAGTTCTGCTCTTGGGGCCTTCACCCAATTCCTCCTGACATCCCTC
TTCTCAAACTCACGATATCCCACCCTGCTCGTCCATGTCCTTCAGGCTGA
ATGTGTACAACGGGCGCTCCTCTCCTGGATAGAGCTTGTTTTTCAATCTT
GTAATCAACAGACGGTCGTGGAGACGGATGCATTTCTTAATACGCTCGCT
GAAGGGGTCCTGGTGGGGTTATGCGAGAGGAAAGAAAGGAGGGAGGAGGG
GAGGAAGGAAGGAAGGAGGGGCATCATAAAACTATGGGCACGTGTGCAAC
TTGGAAGACTTTGCGGAAATTCGTCGCTTTCTTTCACTCCCTATTTGCTT
CATCCTCCACTGCCACACGTGGTATACAACCATAAAAGGCGTTTTCACCG
AATATTCTTCTCCCTCCACGCCCTTTCTCCCTCCCTCCCTTCCTCCTCAC
CTTGACATAGTCTGTGGGGATGTAGTCATACTTGGAGCGGTAGATCCACA
GCCGTTTATTGACAATCACCCAATACACAGATTTCCACTCTCGCACGAAT
AAACTGCGGGTGGAGACCCGTGCCAAGAGCACTCCCTCCGGCAGCTCAAG
CGCGGCAGGCGAGGTAGATGTGAAAGCAGCCATACTCCTGGTTTCCGCAC
TTGTCTTGCCCGGCAAGTAGGGTGAACTGCCATTCGCCGCAGATGCGGGT
GTCTCTGTCTCTGACCCTTCACTGCAGCTTGTTATGGCTACCTCAGGACT
CCATTCAATATTCCAGCTGTCGTCGAGCTGACGT

protein sequence of jgi.p|Nanoce1779_2|591172

>mRNA_5029-protein ID=mRNA_5029-protein|Name=jgi.p|Nanoce1779_2|591172|organism=Nannochloropsis oceanica|type=polypeptide|length=957bp
MARLPPDVESGGGEANISASSSSTSTSTSMEHYRRRQRPWSSTCNSSIGS
DANLTGDRSSSGSSRNRDEDRIPHPPPHSCGFPRRRTKFLFSSVLLPSLL
LLLLVPFPPFTEAFNLLHKLPTFRHHLFFQPATPAPSEGGGSNPLSTSTY
LTPGGDSGGAGPDEQHLSGGSSLVDIARRRFWRWTVWRRLYHSSVVTVLK
QQSTPLASFFSPPMFTPRRRSSLDSTYTKPTPFLFSTPDAGPVIVASSST
AFNSVHLVTRAAAPEQKSLVYVNGTEVSGHLKSGVVLPSPPSRFQQTYRS
SKTAKGEGGDVVVDPRAPLSLSLMGEFCIDKPAYLHIAPTKAGTTPLLWV
TQFSLTRRGSISGINIFGKGRSSVGSTCQKMSSPSLPRSTSPSSKPVALS
SPPQQQRQQPQRPHAQASAQLHPPPPSTLLLQDQQPPPSLSSSSPSSSSS
SSNPIPEEMKLGFSFRWPNEVYNLPPHTITGCSDEALLVADGFLMPGRSD
GGLYVVQDPGKPSEKVTSLTRHKPGWFYHKATWVDLLGPGGRPCLLTARA
TKPFFAQTEGELVLLMQPEGPFPLAEWNTPWEEVVLVKGPDVMFDVVDLD
PEDDVLEVFAAEFFSRRLTLHRLRKGDWKTGRKPRVLTSEVLDHALGPAY
SVVLADLKGYGKPSHVLVSSHECQYEGLVEGGRKEEVEGSGVTTAVAGAD
LLAASEKFAGPGLQGMAARAAVLGSSNSGSGSGMGAEEEGLKGGSLFAYE
IPSKWRERVPWKRSTLATGFHVKSWGQINPGAPGFPYVFYPHRSLRGQAG
QRPYILLAGDCSHAAYIYRPVGAHAGEGGGGEEEIDVRYEPMAQINCGGT
VGSLAVGHLPLAVGGEDEGGEEGEEEGDGWAKIFIPNFDTDKVYAFSFGP
EKASPQVCLGLDPLSVPSERYQRLEVERKARVAEEDEIVGAINTYAKTRG
DKTKIS*

mRNA from alignment at scaffold_12:278258..283674+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_5029 ID=mRNA_5029|Name=jgi.p|Nanoce1779_2|591172|organism=Nannochloropsis oceanica|type=mRNA|length=5417bp|location=Sequence derived from alignment at scaffold_12:278258..283674+ (Nannochloropsis oceanica)
ACAGAGACTAGCACGTGTCATTTAGGTGCCGTTGGTGTCGTTAAGATTCC
TACAACAGCATACGACGACGACCACGTCGAACCATCGAGCCCGCCAATGA
CAAGCAGCATATAAGGGGGCATTCGATAGGCACAACAGGTACGGATTCTA
GGGGCTGATAGAGGGCGGAATGACAGCGATATGGTAGAGAGAGGGAAGAT
ATAAGAAGCAGGAACGCGCGGGTCTCCGTCGGTCCGGTACTTGCGCTGTG
AGTGAGACGCGAGGCATGTCACTTGGTGAAACCGCGCGTGTGATAATCTT
CAAACCCACGGCCTAACCGTTCTCTTCTTTTCTCCTCCCACTAAGCTCAA
ACGGATGGCTAGGTTACCGCCAGATGTGGAGAGTGGCGGTGGCGAAGCCA
ACATAAGCGCCAGCAGCAGTAGCACCAGCACTAGCACCAGCATGGAGCAC
TATAGACGGAGGCAACGACCATGGTCATCGACTTGCAACAGCTCCATCGG
CAGCGATGCGAATTTGACCGGTGATAGAAGCAGTAGCGGCAGCAGCAGGA
ACAGGGACGAAGACAGGATACCTCATCCACCACCCCACTCATGTGGTTTC
CCTCGCCGTCGAACCAAGTTCCTCTTTTCCTCCGTACTCCTCCCCTCTCT
CCTTCTCCTCCTCCTCGTCCCCTTCCCACCATTTACCGAAGCATTCAACC
TCCTCCACAAACTCCCCACATTTCGTCATCACCTTTTCTTTCAACCCGCC
ACTCCCGCGCCATCTGAAGGAGGGGGGAGCAATCCGCTCTCCACGAGCAC
CTACCTGACCCCGGGGGGGGATAGTGGGGGAGCAGGCCCGGACGAGCAGC
ATTTGTCGGGAGGTTCCTCCCTTGTTGATATCGCGCGTCGTCGCTTTTGG
CGGTGGACCGTGTGGCGGAGGCTGTATCATTCATCGGTTGTCACTGTATT
AAAGCAGCAGAGCACCCCTCTGGCGTCCTTCTTCTCGCCTCCCATGTTCA
CGCCCCGGAGACGATCCAGTCTTGACTCTACCTACACGAAACCGACCCCA
TTCCTGTTTTCTACCCCCGATGCCGGGCCTGTGATCGTTGCTTCATCTTC
CACCGCATTCAATTCTGTGCACCTGGTGACACGTGCAGCAGCGCCGGAGC
AGAAGTCTTTGGTGTATGTGAATGGGACTGAGGTTTCGGGACACCTGAAG
TCCGGGGTGGTGTTGCCTTCCCCTCCCTCACGGTTTCAGCAGACATATAG
AAGTAGCAAAACGGCGAAAGGTGAGGGTGGAGATGTAGTGGTAGATCCCC
GGGCGCCGCTGAGCTTGAGTCTGATGGGAGAGTTTTGCATTGACAAGCCC
GCATACTTACACATCGCCCCGACCAAGGCGGGGACCACGCCGTTGCTGTG
GGTGACGCAGTTCAGTCTCACTCGACGAGGGTCCATCAGTGGGATCAATA
TATTTGGGAAGGGCCGGTCGTCGGTTGGGTCCACATGTCAGAAGATGTCG
TCGCCCTCCCTCCCTCGCTCGACCTCGCCTTCCTCGAAGCCAGTGGCGCT
CTCATCACCACCACAGCAGCAGCGACAGCAGCCGCAACGGCCTCATGCCC
AAGCCTCCGCCCAACTTCACCCCCCGCCTCCCTCCACCCTCCTCCTCCAA
GACCAGCAACCCCCGCCGTCCCTCTCCTCCTCCTCCCCCTCCTCCTCCTC
CTCCTCTTCCAACCCCATCCCGGAAGAAATGAAACTCGGTTTCTCCTTCC
GCTGGCCCAACGAAGTTTACAACCTACCTCCGCACACCATCACGGGCTGT
AGTGACGAGGCCCTCCTGGTGGCGGACGGTTTTTTGATGCCCGGGCGGTC
GGACGGTGGGCTGTACGTCGTGCAGGACCCCGGCAAACCCTCGGAGAAAG
TCACGAGCTTAACACGGCACAAACCGGGGTGGTTCTATCACAAGGCAACG
TGGGTCGATCTTTTGGGGCCAGGGGGGCGACCGTGCCTCCTGACTGCGCG
GGCGACGAAACCGTTTTTCGCGCAGACGGAGGGTGAGCTGGTGTTGCTGA
TGCAGCCGGAGGGGCCTTTCCCTCTGGCGGAATGGAACACGCCCTGGGAG
GAGGTGGTGCTCGTCAAGGGCCCGGACGTGATGTTCGATGTGGTGGACTT
GGACCCCGAGGACGACGTTCTCGAAGTGTTTGCTGCCGAGTTTTTCAGCC
GGAGACTGACGTTGCATCGGTTGAGGAAGGGTGATTGGAAAACGGGACGG
AAGCCGAGGGTGCTGACAAGTGAGGTGTTGGACCATGCGCTGGGTCCGGC
GTACAGCGTGGTGTTGGCCGACTTGAAGGGGTACGGGAAACCCTCGCACG
TATTGGTGTCGAGTCATGAGTGTCAGTATGAGGGGTTGGTGGAAGGAGGG
AGAAAAGAGGAAGTGGAGGGGAGCGGGGTGACCACGGCGGTTGCGGGAGC
AGACTTACTTGCTGCTAGTGAGAAATTTGCGGGGCCAGGCTTGCAGGGTA
TGGCGGCGCGGGCGGCAGTGCTTGGGAGTAGCAACAGTGGTAGTGGGAGC
GGAATGGGAGCGGAGGAGGAGGGGTTGAAAGGCGGGTCGTTGTTTGCGTA
CGAAATCCCCTCTAAATGGCGTGAACGCGTGCCGTGGAAAAGGAGCACCC
TGGCCACGGGTTTCCACGTCAAGAGCTGGGGCCAGATTAATCCAGGAGCC
CCTGGATTCCCTTATGTCTTTTATCCGCACCGCTCTTTGAGAGGACAAGC
CGGGCAGCGACCGTACATCCTGCTTGCGGGCGATTGTTCGCATGCTGCTT
ACATCTATCGACCTGTGGGGGCTCATGCGGGGGAGGGAGGGGGAGGGGAG
GAGGAAATCGATGTGAGGTATGAGCCAATGGCACAGATAAATTGTGGAGG
GACCGTCGGGTCGCTAGCAGTCGGGCATTTGCCCTTGGCAGTGGGAGGGG
AAGATGAAGGGGGGGAGGAAGGAGAGGAGGAGGGGGATGGCTGGGCGAAG
ATATTCATTCCCAATTTTGACACGGACAAGGTATACGCGTTCTCGTTTGG
GCCTGAGAAGGCCTCGCCTCAGGTCTGCCTTGGGTTAGACCCTCTGTCCG
TGCCCTCAGAAAGGTACCAGCGGTTGGAGGTGGAGAGAAAGGCCAGGGTG
GCGGAAGAAGATGAGATTGTGGGCGCGATAAACACGTATGCGAAGACACG
GGGGGATAAGACTAAGATCTCGTAAGATGAGGATGAATGAATGAATGAAG
GGAAAGGGCGACGGGTGTATAGATCAGTTAAGGGACTGCAAATGAAGCAG
AGGAGGGAAAGAAGAGGGGGGGGGGTTGACGGAAGGAAGGAAGTAGGGTA
ATAGACGGCTAGACTGTGTGTAAGATAACTCGTGAACAATGCAAGCGATA
CCCTGTGCGTGGGGGGCTGTGGAGGATGCTTTTTGGGGGTAGGAAATGGT
GACCTCCGGATTTATAAGGAGGGAAGGCATGTAATGATTACGAAAATGGA
AGAGGAAGGGATAGAGACTAAGAAAATTAGATGGAGATGGAGAAAACAAG
GAAATTCAAGCTCAAAGACAATCAAAAGAACGAAAGGCACGCAAGTAGAC
AACGCAACCAAGGAGGTCGACCATATTGTTTGTCGCTTTACCTTAAAATG
GAAGCATAGAAGCGTCACGTGCGTTTGATTTCTTGCTTGGTTTCTTATTT
TGTCTTTTTACATAATCCCTGCGCCTGAGAGTGAGGAAAAGTGTGTGCGC
AACGATGTGTATAGGGGTGATGCGAAGCGACTGGTCGCCCATTTTATCTA
CTTATAATTTGAATGTCCCGAAGACTAGGAAGATACATTGATTGCTAGAT
CTATGTGCTTAAATAAAGAGACCTGTACATGCTAGCCACGAAGTGACGCT
TTATGCTCTGTATGCAGAACAAATCAAACAGCAGCTCACATACCCCCCCC
CCTCGCCTTCAAACTTTGCGATGATAAATGTGTCTTTATGTCCTTTGTAA
TTGTATGGTCATATATTTCCAACGCAAAATGTTGTTGTCTTGTCAGTATC
GTACCTATGGCATCCTCTTCTGGTGCACCTGCAACCCCACTCACTTGAAG
TGCTTTTCTCTCTAATTGTTCCTCCCCTCTGCATCGCCCAACACTTGTTG
TGTGATATTTCTGGCAAAATTCTGTTTTTGTACACCGTCGTTACAGATCA
TTCGCTCCCTCATATGGATCCGTCAGCTGTATGCTATAAGGGCGTGACGC
GTTTAAAACATTTCTCTCAAGTGGTGCCTTGCTTTACGCCATGGCGGGCT
TTAAAAACACGCTTGTCGATCTCCTCCCGGAGCGCGCGAACGTCGTCATG
GTTGTAGCCGGCAAATTTGGCCACCAGCCTGGGAATAAGGAGAATAATGG
AAGAAGAGGGGGAAGGAGGGCGGAAGTTTAGAATGAGGAGAGGGGCCTCG
TATTCTTTCTTCAGTTCTGCTCTTGGGGCCTTCACCCAATTCCTCCTGAC
ATCCCTCTTCTCAAACTCACGATATCCCACCCTGCTCGTCCATGTCCTTC
AGGCTGAATGTGTACAACGGGCGCTCCTCTCCTGGATAGAGCTTGTTTTT
CAATCTTGTAATCAACAGACGGTCGTGGAGACGGATGCATTTCTTAATAC
GCTCGCTGAAGGGGTCCTGGTGGGGTTATGCGAGAGGAAAGAAAGGAGGG
AGGAGGGGAGGAAGGAAGGAAGGAGGGGCATCATAAAACTATGGGCACGT
GTGCAACTTGGAAGACTTTGCGGAAATTCGTCGCTTTCTTTCACTCCCTA
TTTGCTTCATCCTCCACTGCCACACGTGGTATACAACCATAAAAGGCGTT
TTCACCGAATATTCTTCTCCCTCCACGCCCTTTCTCCCTCCCTCCCTTCC
TCCTCACCTTGACATAGTCTGTGGGGATGTAGTCATACTTGGAGCGGTAG
ATCCACAGCCGTTTATTGACAATCACCCAATACACAGATTTCCACTCTGA
GAGGAAGTGAGCAAGGTTGCAAAGGAAAAAGAGAAGGGTGGAAAGGGACG
AAAGGGAGATGAGATATGTTGGTGTTGATTAGAAATTGGGGAATACAAAA
GATCCTACATTAATACTTTAGAAACTTGCGAACAGATAATTAAATACGGC
AAATATTGTGGAGAGTACTGACCTCGCACGAATAAACTGCGGGTGGAGAC
CCGTGCCAAGAGCACTCCCTCCGGCAGCTCAAGCGCGGCAGGCGAGGTAG
ATGTGAAAGCAGCCATACTCCTGGTTTCCGCACTTGTCTTGCCCGGCAAG
TAGGGTGAACTGCCATTCGCCGCAGATGCGGGTGTCTCTGTCTCTGACCC
TTCACTGCAGCTTGTTATGGCTACCTCAGGACTCCATTCAATATTCCAGC
TGTCGTCGAGCTGACGT

Coding sequence (CDS) from alignment at scaffold_12:278258..283674+

>mRNA_5029 ID=mRNA_5029|Name=jgi.p|Nanoce1779_2|591172|organism=Nannochloropsis oceanica|type=CDS|length=2871bp|location=Sequence derived from alignment at scaffold_12:278258..283674+ (Nannochloropsis oceanica)
ATGGCTAGGTTACCGCCAGATGTGGAGAGTGGCGGTGGCGAAGCCAACAT
AAGCGCCAGCAGCAGTAGCACCAGCACTAGCACCAGCATGGAGCACTATA
GACGGAGGCAACGACCATGGTCATCGACTTGCAACAGCTCCATCGGCAGC
GATGCGAATTTGACCGGTGATAGAAGCAGTAGCGGCAGCAGCAGGAACAG
GGACGAAGACAGGATACCTCATCCACCACCCCACTCATGTGGTTTCCCTC
GCCGTCGAACCAAGTTCCTCTTTTCCTCCGTACTCCTCCCCTCTCTCCTT
CTCCTCCTCCTCGTCCCCTTCCCACCATTTACCGAAGCATTCAACCTCCT
CCACAAACTCCCCACATTTCGTCATCACCTTTTCTTTCAACCCGCCACTC
CCGCGCCATCTGAAGGAGGGGGGAGCAATCCGCTCTCCACGAGCACCTAC
CTGACCCCGGGGGGGGATAGTGGGGGAGCAGGCCCGGACGAGCAGCATTT
GTCGGGAGGTTCCTCCCTTGTTGATATCGCGCGTCGTCGCTTTTGGCGGT
GGACCGTGTGGCGGAGGCTGTATCATTCATCGGTTGTCACTGTATTAAAG
CAGCAGAGCACCCCTCTGGCGTCCTTCTTCTCGCCTCCCATGTTCACGCC
CCGGAGACGATCCAGTCTTGACTCTACCTACACGAAACCGACCCCATTCC
TGTTTTCTACCCCCGATGCCGGGCCTGTGATCGTTGCTTCATCTTCCACC
GCATTCAATTCTGTGCACCTGGTGACACGTGCAGCAGCGCCGGAGCAGAA
GTCTTTGGTGTATGTGAATGGGACTGAGGTTTCGGGACACCTGAAGTCCG
GGGTGGTGTTGCCTTCCCCTCCCTCACGGTTTCAGCAGACATATAGAAGT
AGCAAAACGGCGAAAGGTGAGGGTGGAGATGTAGTGGTAGATCCCCGGGC
GCCGCTGAGCTTGAGTCTGATGGGAGAGTTTTGCATTGACAAGCCCGCAT
ACTTACACATCGCCCCGACCAAGGCGGGGACCACGCCGTTGCTGTGGGTG
ACGCAGTTCAGTCTCACTCGACGAGGGTCCATCAGTGGGATCAATATATT
TGGGAAGGGCCGGTCGTCGGTTGGGTCCACATGTCAGAAGATGTCGTCGC
CCTCCCTCCCTCGCTCGACCTCGCCTTCCTCGAAGCCAGTGGCGCTCTCA
TCACCACCACAGCAGCAGCGACAGCAGCCGCAACGGCCTCATGCCCAAGC
CTCCGCCCAACTTCACCCCCCGCCTCCCTCCACCCTCCTCCTCCAAGACC
AGCAACCCCCGCCGTCCCTCTCCTCCTCCTCCCCCTCCTCCTCCTCCTCC
TCTTCCAACCCCATCCCGGAAGAAATGAAACTCGGTTTCTCCTTCCGCTG
GCCCAACGAAGTTTACAACCTACCTCCGCACACCATCACGGGCTGTAGTG
ACGAGGCCCTCCTGGTGGCGGACGGTTTTTTGATGCCCGGGCGGTCGGAC
GGTGGGCTGTACGTCGTGCAGGACCCCGGCAAACCCTCGGAGAAAGTCAC
GAGCTTAACACGGCACAAACCGGGGTGGTTCTATCACAAGGCAACGTGGG
TCGATCTTTTGGGGCCAGGGGGGCGACCGTGCCTCCTGACTGCGCGGGCG
ACGAAACCGTTTTTCGCGCAGACGGAGGGTGAGCTGGTGTTGCTGATGCA
GCCGGAGGGGCCTTTCCCTCTGGCGGAATGGAACACGCCCTGGGAGGAGG
TGGTGCTCGTCAAGGGCCCGGACGTGATGTTCGATGTGGTGGACTTGGAC
CCCGAGGACGACGTTCTCGAAGTGTTTGCTGCCGAGTTTTTCAGCCGGAG
ACTGACGTTGCATCGGTTGAGGAAGGGTGATTGGAAAACGGGACGGAAGC
CGAGGGTGCTGACAAGTGAGGTGTTGGACCATGCGCTGGGTCCGGCGTAC
AGCGTGGTGTTGGCCGACTTGAAGGGGTACGGGAAACCCTCGCACGTATT
GGTGTCGAGTCATGAGTGTCAGTATGAGGGGTTGGTGGAAGGAGGGAGAA
AAGAGGAAGTGGAGGGGAGCGGGGTGACCACGGCGGTTGCGGGAGCAGAC
TTACTTGCTGCTAGTGAGAAATTTGCGGGGCCAGGCTTGCAGGGTATGGC
GGCGCGGGCGGCAGTGCTTGGGAGTAGCAACAGTGGTAGTGGGAGCGGAA
TGGGAGCGGAGGAGGAGGGGTTGAAAGGCGGGTCGTTGTTTGCGTACGAA
ATCCCCTCTAAATGGCGTGAACGCGTGCCGTGGAAAAGGAGCACCCTGGC
CACGGGTTTCCACGTCAAGAGCTGGGGCCAGATTAATCCAGGAGCCCCTG
GATTCCCTTATGTCTTTTATCCGCACCGCTCTTTGAGAGGACAAGCCGGG
CAGCGACCGTACATCCTGCTTGCGGGCGATTGTTCGCATGCTGCTTACAT
CTATCGACCTGTGGGGGCTCATGCGGGGGAGGGAGGGGGAGGGGAGGAGG
AAATCGATGTGAGGTATGAGCCAATGGCACAGATAAATTGTGGAGGGACC
GTCGGGTCGCTAGCAGTCGGGCATTTGCCCTTGGCAGTGGGAGGGGAAGA
TGAAGGGGGGGAGGAAGGAGAGGAGGAGGGGGATGGCTGGGCGAAGATAT
TCATTCCCAATTTTGACACGGACAAGGTATACGCGTTCTCGTTTGGGCCT
GAGAAGGCCTCGCCTCAGGTCTGCCTTGGGTTAGACCCTCTGTCCGTGCC
CTCAGAAAGGTACCAGCGGTTGGAGGTGGAGAGAAAGGCCAGGGTGGCGG
AAGAAGATGAGATTGTGGGCGCGATAAACACGTATGCGAAGACACGGGGG
GATAAGACTAAGATCTCGTAA

Synonyms

Publications