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Properties
| Property Name | Value |
|---|
| TranscriptId | 591143 |
| Track | FilteredModels2 |
| ProteinId | 591057 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_12 | supercontig | scaffold_12:214845..216053 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_5001 ID=mRNA_5001|Name=jgi.p|Nanoce1779_2|591057|organism=Nannochloropsis oceanica|type=mRNA|length=791bp
ACAAAAGCAAGTCAACAATGAGGGCTGGCATCTACGTGTTGCTGGGCCTG
GTGGCCAGCACGCAAGCCTTTTTTGCGCCTCAGGCTGTGCGCCTCGTGGG
TGCACCCGCCGCAAGCTGTCGGTCTAGCAGACGCATGGCAGTGACGATGG
AGGGCGAGGTGGCGGGCGTGACGAAAGACGCTGAGAGTAAGATGAAGAAG
TGCGTGGACTCGACGGACAACAACCTGAAAGCGATTCGTACCGGCCGCGC
CTCCGTCACCCTCCTTGACCGTGTCATGGTCGACTACTTCGGCTCCCCCA
CGCCCTTAAACCAACTCGCCGGCATCTCCATCTCGGGGCCCCAATCCCTC
GTTGTCTCTCCCTATGACAAAAGTGCGTTTAAGCTTATCGAGACGGCCAT
CTTAGAGTCCAATTTAGGCCTTAATCCTAACAATGAAGGGAGTGTGCTCC
GCTTGAACATCCCTCCTCTGACCGAGGACCGGAGGAAGGTCCTCAGCAAG
CAAGCCAAGAGCGTGGCAGAAGAGGGGAAGGTGGCTGTGAGGAATGTGCG
GCGGGATGCGGTGGAGCGAGTGAAGAAGTTTGAGAAGGACAAGGCGATTG
GCAAGGATGAGAGTGCAACGGGCCAGGAGGCGTTGCAGAAACTAACGGAC
AAGTATGGAAAGCAGTTAGATGAGATGCTCAAGGCGAAGGAGAAGGAAAT
CATGACTGTTTAGTGTTCTAAAGGAGGGAAGAAAGGAGGGAGGGAGGGTG
GAAAGGAGAGAGGGAGGGAGGGAAGAGCCAGCTGCTCGCGG back to topprotein sequence of jgi.p|Nanoce1779_2|591057 >mRNA_5001-protein ID=mRNA_5001-protein|Name=jgi.p|Nanoce1779_2|591057|organism=Nannochloropsis oceanica|type=polypeptide|length=232bp
MRAGIYVLLGLVASTQAFFAPQAVRLVGAPAASCRSSRRMAVTMEGEVAG
VTKDAESKMKKCVDSTDNNLKAIRTGRASVTLLDRVMVDYFGSPTPLNQL
AGISISGPQSLVVSPYDKSAFKLIETAILESNLGLNPNNEGSVLRLNIPP
LTEDRRKVLSKQAKSVAEEGKVAVRNVRRDAVERVKKFEKDKAIGKDESA
TGQEALQKLTDKYGKQLDEMLKAKEKEIMTV* back to topmRNA from alignment at scaffold_12:214845..216053+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_5001 ID=mRNA_5001|Name=jgi.p|Nanoce1779_2|591057|organism=Nannochloropsis oceanica|type=mRNA|length=1209bp|location=Sequence derived from alignment at scaffold_12:214845..216053+ (Nannochloropsis oceanica)
ACAAAAGCAAGTCAACAATGAGGGCTGGCATCTACGTGTTGCTGGGCCTG
GTGGCCAGCACGCAAGCCTTTTTTGCGCCTCAGGCTGTGCGCCTCGTGGG
TGCACCCGCCGCAAGCTGTCGGTCTAGCAGGTACGTGCGAATTCGGTCAG
GGCAAGTCGTCTTCATCACCACGATAGGCAAGTATCTCCCCCTTACCATT
TCATGCCCATTCACCCCCCCAAAGACGCATGGCAGTGACGATGGAGGGCG
AGGTGGCGGGCGTGACGAAAGACGCTGAGAGTAAGATGAAGAAGTGCGTG
GACTCGACGGACAACAACCTGAAAGCGATTCGTACCGGCCGCGCCTCGTA
AGTGTCGTTGCTACTTTTCTTCTTGCCATATCGCGCCTTCGCTTTGCGTT
CTCTGCTTGATTGAACACTTGTCTGCGCGATACATGTAGAGGACTTAATC
TTCAAGGAGGGACAGATACTCCGTGACTCAGCTTGCTTGTTGACCACCTC
TATCTTTGGTGTACGTTCGACTCCTTACAATGTTGCGCATAAAACGGATG
GCCCGCTAGAACGACGGACTGCTTAAAACTACTGTCAATTAAGCTCCTCC
TCTACCACTTCATTTCTCTGCCGATTTTAATTTTATTTTCTTATCTTCCT
CCTCCCTGCCCAACTTCCCAGCGTCACCCTCCTTGACCGTGTCATGGTCG
ACTACTTCGGCTCCCCCACGCCCTTAAACCAACTCGCCGGCATCTCCATC
TCGGGGCCCCAATCCCTCGTTGTCTCTCCCTATGACAAAAGTGCGTTTAA
GCTTATCGAGACGGCCATCTTAGAGTCCAATTTAGGCCTTAATCCTAACA
ATGAAGGGAGTGTGCTCCGCTTGAACATCCCTCCTCTGACCGAGGACCGG
AGGAAGGTCCTCAGCAAGCAAGCCAAGAGCGTGGCAGAAGAGGGGAAGGT
GGCTGTGAGGAATGTGCGGCGGGATGCGGTGGAGCGAGTGAAGAAGTTTG
AGAAGGACAAGGCGATTGGCAAGGATGAGAGTGCAACGGGCCAGGAGGCG
TTGCAGAAACTAACGGACAAGTATGGAAAGCAGTTAGATGAGATGCTCAA
GGCGAAGGAGAAGGAAATCATGACTGTTTAGTGTTCTAAAGGAGGGAAGA
AAGGAGGGAGGGAGGGTGGAAAGGAGAGAGGGAGGGAGGGAAGAGCCAGC
TGCTCGCGG back to topCoding sequence (CDS) from alignment at scaffold_12:214845..216053+ >mRNA_5001 ID=mRNA_5001|Name=jgi.p|Nanoce1779_2|591057|organism=Nannochloropsis oceanica|type=CDS|length=2088bp|location=Sequence derived from alignment at scaffold_12:214845..216053+ (Nannochloropsis oceanica)
ATGAGGGCTGGCATCTACGTGTTGCTGGGCCTGGTGGCCAGCACGCAAGC
CTTTTTTGCGCCTCAGGCTGTGCGCCTCGTGGGTGCACCCGCCGCAAGCT
GTCGGTCTAGCAGACGCATGGCAGTGACGATGGAGGGCGAGGTGGCGGGC
GTGACGAAAGACGCTGAGAGTAAGATGAAGAAGTGCGTGGACTCGACGGA
CAACAACCTGAAAGCGATTCGTACCGGCCGCGCCTCCGTCACCCTCCTTG
ACCGTGTCATGGTCGACTACTTCGGCTCCCCCACGCCCTTAAACCAACTC
GCCGGCATCTCCATCTCGGGGCCCCAATCCCTCGTTGTCTCTCCCTATGA
CAAAAGTGCGTTTAAGCTTATCGAGACGGCCATCTTAGAGTCCAATTTAG
GCCTTAATCCTAACAATGAAGGGAGTGTGCTCCGCTTGAACATCCCTCCT
CTGACCGAGGACCGGAGGAAGGTCCTCAGCAAGCAAGCCAAGAGCGTGGC
AGAAGAGGGGAAGGTGGCTGTGAGGAATGTGCGGCGGGATGCGGTGGAGC
GAGTGAAGAAGTTTGAGAAGGACAAGGCGATTGGCAAGGATGAGAGTGCA
ACGGGCCAGGAGGCGTTGCAGAAACTAACGGACAAGTATGGAAAGCAGTT
AGATGAGATGCTCAAGGCGAAGGAGAAGGAAATCATGACTGTTTAGATGA
GGGCTGGCATCTACGTGTTGCTGGGCCTGGTGGCCAGCACGCAAGCCTTT
TTTGCGCCTCAGGCTGTGCGCCTCGTGGGTGCACCCGCCGCAAGCTGTCG
GTCTAGCAGACGCATGGCAGTGACGATGGAGGGCGAGGTGGCGGGCGTGA
CGAAAGACGCTGAGAGTAAGATGAAGAAGTGCGTGGACTCGACGGACAAC
AACCTGAAAGCGATTCGTACCGGCCGCGCCTCCGTCACCCTCCTTGACCG
TGTCATGGTCGACTACTTCGGCTCCCCCACGCCCTTAAACCAACTCGCCG
GCATCTCCATCTCGGGGCCCCAATCCCTCGTTGTCTCTCCCTATGACAAA
AGTGCGTTTAAGCTTATCGAGACGGCCATCTTAGAGTCCAATTTAGGCCT
TAATCCTAACAATGAAGGGAGTGTGCTCCGCTTGAACATCCCTCCTCTGA
CCGAGGACCGGAGGAAGGTCCTCAGCAAGCAAGCCAAGAGCGTGGCAGAA
GAGGGGAAGGTGGCTGTGAGGAATGTGCGGCGGGATGCGGTGGAGCGAGT
GAAGAAGTTTGAGAAGGACAAGGCGATTGGCAAGGATGAGAGTGCAACGG
GCCAGGAGGCGTTGCAGAAACTAACGGACAAGTATGGAAAGCAGTTAGAT
GAGATGCTCAAGGCGAAGGAGAAGGAAATCATGACTGTTTAGATGAGGGC
TGGCATCTACGTGTTGCTGGGCCTGGTGGCCAGCACGCAAGCCTTTTTTG
CGCCTCAGGCTGTGCGCCTCGTGGGTGCACCCGCCGCAAGCTGTCGGTCT
AGCAGACGCATGGCAGTGACGATGGAGGGCGAGGTGGCGGGCGTGACGAA
AGACGCTGAGAGTAAGATGAAGAAGTGCGTGGACTCGACGGACAACAACC
TGAAAGCGATTCGTACCGGCCGCGCCTCCGTCACCCTCCTTGACCGTGTC
ATGGTCGACTACTTCGGCTCCCCCACGCCCTTAAACCAACTCGCCGGCAT
CTCCATCTCGGGGCCCCAATCCCTCGTTGTCTCTCCCTATGACAAAAGTG
CGTTTAAGCTTATCGAGACGGCCATCTTAGAGTCCAATTTAGGCCTTAAT
CCTAACAATGAAGGGAGTGTGCTCCGCTTGAACATCCCTCCTCTGACCGA
GGACCGGAGGAAGGTCCTCAGCAAGCAAGCCAAGAGCGTGGCAGAAGAGG
GGAAGGTGGCTGTGAGGAATGTGCGGCGGGATGCGGTGGAGCGAGTGAAG
AAGTTTGAGAAGGACAAGGCGATTGGCAAGGATGAGAGTGCAACGGGCCA
GGAGGCGTTGCAGAAACTAACGGACAAGTATGGAAAGCAGTTAGATGAGA
TGCTCAAGGCGAAGGAGAAGGAAATCATGACTGTTTAG back to top
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