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Properties
| Property Name | Value |
|---|
| TranscriptId | 577580 |
| Track | FilteredModels2 |
| ProteinId | 577494 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_3 | supercontig | scaffold_3:1209919..1211377 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_500 ID=mRNA_500|Name=jgi.p|Nanoce1779_2|577494|organism=Nannochloropsis oceanica|type=mRNA|length=1354bp
AGTTGTAGTAGTTGTAGTAGTAGTAGTAATTATAATAGTAGTGGTGGTGG
TGGTGGTGGTAGTAGTAGTAGTAGTAGTAGTAGCAGCAGCAGCAGCGTGA
TCAATAACCCATTACCTAGCCAGGTGGTAGCTCTGGCCTTGCAGCACCAA
TTTGATTGGGTGGCCGTTGGTACGTTTGTGTCTGAGATGGTGAACAACAA
CTTTCATATAGCCACAACGACTAATTGAACATATTTCTTTATCTGAGCAG
GCAGAGCCCTCAAGGCCGATCCTTGGGAGTGTTGGAAGACCTACGAGGCC
TACACCCAAGAAAAAAACTTCCACAGCGATGACACTGATGCAAGTCATGG
GCCCACAACCATTTCATCTCTTGCCGATGACGTGGCCGCATTCCTGCCGT
TTGCCTCCTCCCCCTCCCCTCTGCGAAGGAATCCTCGTGCTCCTCCCTAC
GACACCTTCAACCATCACCAGTCCCCCGTCGCATCCGCTACTACTGCAGC
TGTTACTACTGGAGGCGAGGATGACAAGGGCAGCAATAACCGCAGCAACA
TATGCAGCCCCATCTCTCCCCCCCCTTCTGCGCTTTCTCCACTCATGGGA
GCAGGCGGTCCTTCCTTCCTCCTCCATCACTTCCCTCGACCCAACCCACG
GTCACGGCTCTCCGTTTCTCCCCAGGCCCCTGCTAGCAGCACCGCAACTA
CCACTATCACCACCCCTGCTGCCTCCTTCCTTCGTTCCTTCTCTACATCC
TCGTTTCAGCAGCCAGGCGTAAGCCCCAATGGAGGAGGAAAAGGGGGAGG
AGGAGAAGGAGAAACACAAATGCATCAGCCTGGAGGTCTGCAAGACAGTG
TATATAGCACATTTTCTGGGATGGGGGGAGGAGGTGGAGGAGGGGCATCC
ATTTTCTTGCCAGGTTCTGAAAGCATGAGCTTGTCGATGGTTCAATCGGC
CATGTTGGACATGCCCTCTCTTTATCTCGGGCAATCCACCGCATTCGGTG
CGGGCGCTTCTACATTTTTGGTCGGGGGGGGTTCGACCCTCTCTCCTCCC
GGTGCTGCTGGTGTAGGTGCGCCTGGCGCTGATGTTGATGGCGGTGGTCC
AGACGATCTCCTGCCACCGTTCCCCCCTCATACAGCCCCTCCATTTCTAT
CATCCTCCCCTGTGCTTCAACCATGGCCACGAGGCCTGACTGGACCGACG
CACGCGCTTATACCGTCGACCATTATTGAAGGGTCGGAAGCCGGCGGCTG
TAGCACAGGTACTTTGGACCAGTCGGAATTGAAAAAATAGACAGTAGAAC
AGAAGTGCAGGAATCAAAGTCAATTGTAGGAATGTCACATCAAAAGCTTT
CTTG back to topprotein sequence of jgi.p|Nanoce1779_2|577494 >mRNA_500-protein ID=mRNA_500-protein|Name=jgi.p|Nanoce1779_2|577494|organism=Nannochloropsis oceanica|type=polypeptide|length=232bp
MGAGGPSFLLHHFPRPNPRSRLSVSPQAPASSTATTTITTPAASFLRSFS
TSSFQQPGVSPNGGGKGGGGEGETQMHQPGGLQDSVYSTFSGMGGGGGGG
ASIFLPGSESMSLSMVQSAMLDMPSLYLGQSTAFGAGASTFLVGGGSTLS
PPGAAGVGAPGADVDGGGPDDLLPPFPPHTAPPFLSSSPVLQPWPRGLTG
PTHALIPSTIIEGSEAGGCSTGTLDQSELKK* back to topmRNA from alignment at scaffold_3:1209919..1211377- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_500 ID=mRNA_500|Name=jgi.p|Nanoce1779_2|577494|organism=Nannochloropsis oceanica|type=mRNA|length=1459bp|location=Sequence derived from alignment at scaffold_3:1209919..1211377- (Nannochloropsis oceanica)
AGTTGTAGTAGTTGTAGTAGTAGTAGTAATTATAATAGTAGTGGTGGTGG
TGGTGGTGGTAGTAGTAGTAGTAGTAGTAGTAGCAGCAGCAGCAGCGTGA
TCAATAACCCATTACCTAGCCAGGTGGTAGCTCTGGCCTTGCAGCACCAA
TTTGATTGGGTGGCCGTTGGTACGTTTGTGTCTGAGATGGTGAACAACAA
CTTTCATATAGCCACAACGACTAATTGAACATATTTCTTTATCTGAGCAG
GCAGAGCCCTCAAGGCCGATCCTTGGGAGTGTTGGAAGACCTACGAGGCC
TACACCCAAGGTAAGCTCCTCCACACCCCATACTTTCTCCCTCTCTTTCC
TCTCTCTATAACACCTCCCTTGCAATAATATTTCCCTCTCCACCCTCTCC
CTCCTCAACCCCCAGAAAAAAACTTCCACAGCGATGACACTGATGCAAGT
CATGGGCCCACAACCATTTCATCTCTTGCCGATGACGTGGCCGCATTCCT
GCCGTTTGCCTCCTCCCCCTCCCCTCTGCGAAGGAATCCTCGTGCTCCTC
CCTACGACACCTTCAACCATCACCAGTCCCCCGTCGCATCCGCTACTACT
GCAGCTGTTACTACTGGAGGCGAGGATGACAAGGGCAGCAATAACCGCAG
CAACATATGCAGCCCCATCTCTCCCCCCCCTTCTGCGCTTTCTCCACTCA
TGGGAGCAGGCGGTCCTTCCTTCCTCCTCCATCACTTCCCTCGACCCAAC
CCACGGTCACGGCTCTCCGTTTCTCCCCAGGCCCCTGCTAGCAGCACCGC
AACTACCACTATCACCACCCCTGCTGCCTCCTTCCTTCGTTCCTTCTCTA
CATCCTCGTTTCAGCAGCCAGGCGTAAGCCCCAATGGAGGAGGAAAAGGG
GGAGGAGGAGAAGGAGAAACACAAATGCATCAGCCTGGAGGTCTGCAAGA
CAGTGTATATAGCACATTTTCTGGGATGGGGGGAGGAGGTGGAGGAGGGG
CATCCATTTTCTTGCCAGGTTCTGAAAGCATGAGCTTGTCGATGGTTCAA
TCGGCCATGTTGGACATGCCCTCTCTTTATCTCGGGCAATCCACCGCATT
CGGTGCGGGCGCTTCTACATTTTTGGTCGGGGGGGGTTCGACCCTCTCTC
CTCCCGGTGCTGCTGGTGTAGGTGCGCCTGGCGCTGATGTTGATGGCGGT
GGTCCAGACGATCTCCTGCCACCGTTCCCCCCTCATACAGCCCCTCCATT
TCTATCATCCTCCCCTGTGCTTCAACCATGGCCACGAGGCCTGACTGGAC
CGACGCACGCGCTTATACCGTCGACCATTATTGAAGGGTCGGAAGCCGGC
GGCTGTAGCACAGGTACTTTGGACCAGTCGGAATTGAAAAAATAGACAGT
AGAACAGAAGTGCAGGAATCAAAGTCAATTGTAGGAATGTCACATCAAAA
GCTTTCTTG back to topCoding sequence (CDS) from alignment at scaffold_3:1209919..1211377- >mRNA_500 ID=mRNA_500|Name=jgi.p|Nanoce1779_2|577494|organism=Nannochloropsis oceanica|type=CDS|length=696bp|location=Sequence derived from alignment at scaffold_3:1209919..1211377- (Nannochloropsis oceanica)
ATGGGAGCAGGCGGTCCTTCCTTCCTCCTCCATCACTTCCCTCGACCCAA
CCCACGGTCACGGCTCTCCGTTTCTCCCCAGGCCCCTGCTAGCAGCACCG
CAACTACCACTATCACCACCCCTGCTGCCTCCTTCCTTCGTTCCTTCTCT
ACATCCTCGTTTCAGCAGCCAGGCGTAAGCCCCAATGGAGGAGGAAAAGG
GGGAGGAGGAGAAGGAGAAACACAAATGCATCAGCCTGGAGGTCTGCAAG
ACAGTGTATATAGCACATTTTCTGGGATGGGGGGAGGAGGTGGAGGAGGG
GCATCCATTTTCTTGCCAGGTTCTGAAAGCATGAGCTTGTCGATGGTTCA
ATCGGCCATGTTGGACATGCCCTCTCTTTATCTCGGGCAATCCACCGCAT
TCGGTGCGGGCGCTTCTACATTTTTGGTCGGGGGGGGTTCGACCCTCTCT
CCTCCCGGTGCTGCTGGTGTAGGTGCGCCTGGCGCTGATGTTGATGGCGG
TGGTCCAGACGATCTCCTGCCACCGTTCCCCCCTCATACAGCCCCTCCAT
TTCTATCATCCTCCCCTGTGCTTCAACCATGGCCACGAGGCCTGACTGGA
CCGACGCACGCGCTTATACCGTCGACCATTATTGAAGGGTCGGAAGCCGG
CGGCTGTAGCACAGGTACTTTGGACCAGTCGGAATTGAAAAAATAG back to top
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