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Properties
| Property Name | Value |
|---|
| TranscriptId | 591083 |
| Track | FilteredModels2 |
| ProteinId | 590997 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_12 | supercontig | scaffold_12:164860..168012 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_4975 ID=mRNA_4975|Name=jgi.p|Nanoce1779_2|590997|organism=Nannochloropsis oceanica|type=mRNA|length=2992bp
TCATGTATCGCCAACAAGACTTCACTTCAATCATCGCACCACTTACAAAT
TCACCCACGCCAGCCCCTATTACCCTTCCGCACGAGCACAGGTTGACACA
CGTCGTAATAATCATTGTTTTCTGCCAGCAACTCCAGCCAAGGAGGAAAG
GGGACTTATGAAGTCAAGCCTTCCCACCAGCCGCCCACCTCCAAAGGCGG
ATGCGGTGGGCTGTGATAAACAGCGTGTGGCGGAAAGCCTTCTGATGTCC
AGTTGCGCAGGCCAGTTTCAGCACGTAGTGGATGGTAAGGGTACATTTTC
TGTGGGATGAGCCGTGCGGTTCCCCATTCCTCGCCCTAATTTTTCTCCCC
CTCTCCAATTCAGACCTGCGTGAGATTCTCCCGCCCAGCGTTCTGACCAA
GACCTTCCTGCAAGCAGTGGCAAGGGCATATCACTCTCAGCGGGGGGTGA
TTGTCACAGTGGCCGGTGCCAAGGTCAGTTGGGTTGTTACGTGGAAATAT
GGAATGGGGAAAAGCCTGTTTTCACCATCGCCTCTCTCTCTCTCTCTTCC
TTTTCAGGTCTTGCTGCATAAGCTGGGCGAGGTGGACGAAGGTTACCTCG
ACCCGAAAAACAAACAGATTCTAATGGTGGATGCCCGGGCTGAGGTACGT
CGAAGCGATTCAGGAACTCATCAATTGCCTCATCGCTTGCTCGCTGACCG
TCGCTCCCCTCTTCTCCTACCGAAGGTGGTCTCCACGGATAACGACAATG
GAAAGACGCTGATGACCGCTACTTCAGAGCCCGTGCGAGTGGAGCTGGAG
CAAGCAGTGGCACACTACGTCGCAGCAAACTATGCGACAGAAGCAGTGAG
TTGGATTTCATAAGTGTAACTAGTTAGCATTTTAAAAAAAAAATACAATC
CTTCTCAAAACATAGGCTGCGTGTGCCGTATACGCCCAGGAAGGGGCGCT
GAGTGTGGTGATTTATGGGGAACGACTAAATTTCCGGAATTTCTGGTCGG
GATCTTGGCTCTCCGTTTGGGAGATCAAGGAGAAGGCGCTGTCAGGCACC
ATCGAGCTCTGCGCACATTACTTCGAGGGAGGCAACGTTCAGATGCGAGC
CACCAAGACCGTGCCGACCACCCCTCTTCCTCCCACCATGGACGAGAGAA
CAGCTGCGGTTGCGGTAGTCGACGCCATTCAGCAAGCCGAGGAGACGATG
CAGCGGGGCCTAGAGACAACTTATTGTAAGTTGACTGACGAAGGTTACCG
CAATTTGCGCATGAAACTACCCGTAAGCAAACAAAGAATGGACTGGTCAG
CCGGAGCTAAGAAGCTAGTGCCCACCAAGATGTTATGACGCTGTAAGCTT
TTGTGCAGTAAAGGAAAAAAACAAGAAAAAGCATGGGGACATATGACATT
TTCGTATGCGCCAGGGGCAGCCATTTGTTGCTTCCTTTGCGTTGCTCTAA
TGCCACGTATTCTATGCGTCTACAATGACACGCTCTCTCTCTGCATCAAT
GATACATCGACACAGGCACATCCATGCGATGGTGGTGCCCTTTCGTGGTG
GCAGGGGGGCTCGCACTCGCATGCCCTACCACATATCGCCCCAGCCATCG
TATCCAGCACTTCACTACTAGGACATCCGCACGCACCACAACAGCAGCCT
GGATCTCTATGCTCCCCACAGAAAGACTCGGAGCAGGAAAGGCTTACAGG
AGAGCCTTCACGTGCATGCAATTGCCGTCCGACTTTTCCGCTGCTAGACA
GAATGCTGCTGCTGCTGCTGCAACCTTTTCCCCCTCTTCCGCCTCTTCCA
CCCTGCCACCACCAGACCTAGAGCTGGACGAGATCAAGCGCTACTCCCGA
CATCTCATTCTGTCTCAGATTGGCATGCAAGGCCAACGGAAGCTCAAGGG
TGGCTCGGTTCTGTGCGTGGGAGCGGGGGGCTTAGGGTCTCCCTTGTTAC
TGTACTTGGCCGCGGCGGGCGTAGGTCGCCTGGGCATCGTGGATGACGAC
GAGGTGGACGTGTCCAATCTCCAACGACAAATCATTCATGGCCAGTCTAA
TGTAGGGGAAGCCAAGGTCCGTTCGGCGGAGCATCGAATCAGGGAGGTGA
ATCCGCACGTGCAGGTGGACATGTACGAGGAGAAGATGACTTCGGAGAAC
GTCTTGCGCATTCTGGCTCCCTACGACGTCGTGGTGGACGGCACAGACAA
TTTCCCCACTCGATACCTAGTCAATGATGCCTGCGTCATACTGCGGAAGC
CTTTAGTGTACGGGGCCATCTTGCGGTTCGAAGGCCAGGCGTCTGTATTC
AACTACAAGGGCGGGCCTAATTATCGGGACTTGCTGCCCGTTCCTCCTGC
GCCGGGCGACGTGCCTTCCTGTGCGGAAGGGGGCGTGCTGGGGGTGTTGC
CAGGAATCATTGGTTGCATTCAGGCCACAGAGACACTCAAGCTTCTCACA
GGTGTTGGGAAGCCACTGTCCGGTCGTATCCTCATATATAATGCCCTTGA
CATGACCTTCCGTGAGGTCGGCCTGCAGCCGGACCCGAATACCCCCAAAA
TCACTTCCCTCATCGACTACGATTGCTTTTGCAGTAGCGGTAGTGGAACA
CAGCGACACCAAATGCAGCAAGGATTGTCTGAGCCGGTGTTCAAACGTGT
GTCGGTCAAGGAGGCACGGCGCAAGTTTGAGGAGGACGGTTGGGCCCCTT
TTGTGCTGGACGTCCGGCTGCCACAGGAGGCGGAGATCGCCACGCTGCCT
TTCAGTGACCTTCTCTGCCCGCATCGGGAAGTGGAACGAGTGGCAGCGCA
GCTTCCGAGGGATCAGGACATTCTTGTGTACTGCAAAGTGGGAGGCCGCT
CGGCACAGGCTTGTCAAAAGTTAGCAGCGTTGGGGTTTCCCAATGTGGTC
AACCTAGACGGAGGCATTATAGCGTGGGCACAAGAGATAGACGCACGATT
GCCCGTGTACTAGAAGAAGAATGAGAGGCAAAAAGACTGAAG back to topprotein sequence of jgi.p|Nanoce1779_2|590997 >mRNA_4975-protein ID=mRNA_4975-protein|Name=jgi.p|Nanoce1779_2|590997|organism=Nannochloropsis oceanica|type=polypeptide|length=480bp
MRWWCPFVVAGGLALACPTTYRPSHRIQHFTTRTSARTTTAAWISMLPTE
RLGAGKAYRRAFTCMQLPSDFSAARQNAAAAAATFSPSSASSTLPPPDLE
LDEIKRYSRHLILSQIGMQGQRKLKGGSVLCVGAGGLGSPLLLYLAAAGV
GRLGIVDDDEVDVSNLQRQIIHGQSNVGEAKVRSAEHRIREVNPHVQVDM
YEEKMTSENVLRILAPYDVVVDGTDNFPTRYLVNDACVILRKPLVYGAIL
RFEGQASVFNYKGGPNYRDLLPVPPAPGDVPSCAEGGVLGVLPGIIGCIQ
ATETLKLLTGVGKPLSGRILIYNALDMTFREVGLQPDPNTPKITSLIDYD
CFCSSGSGTQRHQMQQGLSEPVFKRVSVKEARRKFEEDGWAPFVLDVRLP
QEAEIATLPFSDLLCPHREVERVAAQLPRDQDILVYCKVGGRSAQACQKL
AALGFPNVVNLDGGIIAWAQEIDARLPVY* back to topmRNA from alignment at scaffold_12:164860..168012- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_4975 ID=mRNA_4975|Name=jgi.p|Nanoce1779_2|590997|organism=Nannochloropsis oceanica|type=mRNA|length=3153bp|location=Sequence derived from alignment at scaffold_12:164860..168012- (Nannochloropsis oceanica)
TCATGTATCGCCAACAAGACTTCACTTCAATCATCGCACCACTTACAAAT
TCACCCACGCCAGCCCCTATTACCCTTCCGCACGAGCACAGGTTGACACA
CGTCGTAATAATCATTGTTTTCTGCCAGCAACTCCAGCCAAGGAGGAAAG
GGGACTTATGAAGTCAAGCCTTCCCACCAGCCGCCCACCTCCAAAGGCGG
ATGCGGTGGGCTGTGATAAACAGCGTGTGGCGGAAAGCCTTCTGATGTCC
AGTTGCGCAGGCCAGTTTCAGCACGTAGTGGATGGTAAGGGTACATTTTC
TGTGGGATGAGCCGTGCGGTTCCCCATTCCTCGCCCTAATTTTTCTCCCC
CTCTCCAATTCAGACCTGCGTGAGATTCTCCCGCCCAGCGTTCTGACCAA
GACCTTCCTGCAAGCAGTGGCAAGGGCATATCACTCTCAGCGGGGGGTGA
TTGTCACAGTGGCCGGTGCCAAGGTCAGTTGGGTTGTTACGTGGAAATAT
GGAATGGGGAAAAGCCTGTTTTCACCATCGCCTCTCTCTCTCTCTCTTCC
TTTTCAGGTCTTGCTGCATAAGCTGGGCGAGGTGGACGAAGGTTACCTCG
ACCCGAAAAACAAACAGATTCTAATGGTGGATGCCCGGGCTGAGGTACGT
CGAAGCGATTCAGGAACTCATCAATTGCCTCATCGCTTGCTCGCTGACCG
TCGCTCCCCTCTTCTCCTACCGAAGGTGGTCTCCACGGATAACGACAATG
GAAAGACGCTGATGACCGCTACTTCAGAGCCCGTGCGAGTGGAGCTGGAG
CAAGCAGTGGCACACTACGTCGCAGCAAACTATGCGACAGAAGCAGTGAG
TTGGATTTCATAAGTGTAACTAGTTAGCATTTTAAAAAAAAAATACAATC
CTTCTCAAAACATAGGCTGCGTGTGCCGTATACGCCCAGGAAGGGGCGCT
GAGTGTGGTGATTTATGGGGAACGACTAAATTTCCGGAATTTCTGGTCGG
GATCTTGGCTCTCCGTTTGGGAGATCAAGGAGAAGGCGCTGTCAGGCACC
ATCGAGGTACGCACAGATGACGTTTGTTTGCCTGCTTTACAAGACCAATC
TGACACATATTTTGACATGGCCAGCTCTGCGCACATTACTTCGAGGGAGG
CAACGTTCAGATGCGAGCCACCAAGACCGTGCCGACCACCCCTCTTCCTC
CCACCATGGACGAGAGAACAGCTGCGGTTGCGGTAGTCGACGCCATTCAG
CAAGCCGAGGAGACGATGCAGGTAACTGAGCCGAGTGTGGCTACGAGGTG
TATGTTGACAAACTTATCAGCCTCTGATCGAAAGTCTCACACGTTATGTA
CATTTCATCCACAGCGGGGCCTAGAGACAACTTATTGTAAGTTGACTGAC
GAAGGTTACCGCAATTTGCGCATGAAACTACCCGTAAGCAAACAAAGAAT
GGACTGGTCAGCCGGAGCTAAGAAGCTAGTGCCCACCAAGATGTTATGAC
GCTGTAAGCTTTTGTGCAGTAAAGGAAAAAAACAAGAAAAAGCATGGGGA
CATATGACATTTTCGTATGCGCCAGGGGCAGCCATTTGTTGCTTCCTTTG
CGTTGCTCTAATGCCACGTATTCTATGCGTCTACAATGACACGCTCTCTC
TCTGCATCAATGATACATCGACACAGGCACATCCATGCGATGGTGGTGCC
CTTTCGTGGTGGCAGGGGGGCTCGCACTCGCATGCCCTACCACATATCGC
CCCAGCCATCGTATCCAGCACTTCACTACTAGGACATCCGCACGCACCAC
AACAGCAGCCTGGATCTCTATGCTCCCCACAGAAAGACTCGGAGCAGGAA
AGGCTTACAGGAGAGCCTTCACGTGCATGCAATTGCCGTCCGACTTTTCC
GCTGCTAGACAGAATGCTGCTGCTGCTGCTGCAACCTTTTCCCCCTCTTC
CGCCTCTTCCACCCTGCCACCACCAGACCTAGAGCTGGACGAGATCAAGC
GCTACTCCCGACATCTCATTCTGTCTCAGATTGGCATGCAAGGCCAACGG
AAGCTCAAGGGTGGCTCGGTTCTGTGCGTGGGAGCGGGGGGCTTAGGGTC
TCCCTTGTTACTGTACTTGGCCGCGGCGGGCGTAGGTCGCCTGGGCATCG
TGGATGACGACGAGGTGGACGTGTCCAATCTCCAACGACAAATCATTCAT
GGCCAGTCTAATGTAGGGGAAGCCAAGGTCCGTTCGGCGGAGCATCGAAT
CAGGGAGGTGAATCCGCACGTGCAGGTGGACATGTACGAGGAGAAGATGA
CTTCGGAGAACGTCTTGCGCATTCTGGCTCCCTACGACGTCGTGGTGGAC
GGCACAGACAATTTCCCCACTCGATACCTAGTCAATGATGCCTGCGTCAT
ACTGCGGAAGCCTTTAGTGTACGGGGCCATCTTGCGGTTCGAAGGCCAGG
CGTCTGTATTCAACTACAAGGGCGGGCCTAATTATCGGGACTTGCTGCCC
GTTCCTCCTGCGCCGGGCGACGTGCCTTCCTGTGCGGAAGGGGGCGTGCT
GGGGGTGTTGCCAGGAATCATTGGTTGCATTCAGGCCACAGAGACACTCA
AGCTTCTCACAGGTGTTGGGAAGCCACTGTCCGGTCGTATCCTCATATAT
AATGCCCTTGACATGACCTTCCGTGAGGTCGGCCTGCAGCCGGACCCGAA
TACCCCCAAAATCACTTCCCTCATCGACTACGATTGCTTTTGCAGTAGCG
GTAGTGGAACACAGCGACACCAAATGCAGCAAGGATTGTCTGAGCCGGTG
TTCAAACGTGTGTCGGTCAAGGAGGCACGGCGCAAGTTTGAGGAGGACGG
TTGGGCCCCTTTTGTGCTGGACGTCCGGCTGCCACAGGAGGCGGAGATCG
CCACGCTGCCTTTCAGTGACCTTCTCTGCCCGCATCGGGAAGTGGAACGA
GTGGCAGCGCAGCTTCCGAGGGATCAGGACATTCTTGTGTACTGCAAAGT
GGGAGGCCGCTCGGCACAGGCTTGTCAAAAGTTAGCAGCGTTGGGGTTTC
CCAATGTGGTCAACCTAGACGGAGGCATTATAGCGTGGGCACAAGAGATA
GACGCACGATTGCCCGTGTACTAGAAGAAGAATGAGAGGCAAAAAGACTG
AAG back to topCoding sequence (CDS) from alignment at scaffold_12:164860..168012- >mRNA_4975 ID=mRNA_4975|Name=jgi.p|Nanoce1779_2|590997|organism=Nannochloropsis oceanica|type=CDS|length=1440bp|location=Sequence derived from alignment at scaffold_12:164860..168012- (Nannochloropsis oceanica)
ATGCGATGGTGGTGCCCTTTCGTGGTGGCAGGGGGGCTCGCACTCGCATG
CCCTACCACATATCGCCCCAGCCATCGTATCCAGCACTTCACTACTAGGA
CATCCGCACGCACCACAACAGCAGCCTGGATCTCTATGCTCCCCACAGAA
AGACTCGGAGCAGGAAAGGCTTACAGGAGAGCCTTCACGTGCATGCAATT
GCCGTCCGACTTTTCCGCTGCTAGACAGAATGCTGCTGCTGCTGCTGCAA
CCTTTTCCCCCTCTTCCGCCTCTTCCACCCTGCCACCACCAGACCTAGAG
CTGGACGAGATCAAGCGCTACTCCCGACATCTCATTCTGTCTCAGATTGG
CATGCAAGGCCAACGGAAGCTCAAGGGTGGCTCGGTTCTGTGCGTGGGAG
CGGGGGGCTTAGGGTCTCCCTTGTTACTGTACTTGGCCGCGGCGGGCGTA
GGTCGCCTGGGCATCGTGGATGACGACGAGGTGGACGTGTCCAATCTCCA
ACGACAAATCATTCATGGCCAGTCTAATGTAGGGGAAGCCAAGGTCCGTT
CGGCGGAGCATCGAATCAGGGAGGTGAATCCGCACGTGCAGGTGGACATG
TACGAGGAGAAGATGACTTCGGAGAACGTCTTGCGCATTCTGGCTCCCTA
CGACGTCGTGGTGGACGGCACAGACAATTTCCCCACTCGATACCTAGTCA
ATGATGCCTGCGTCATACTGCGGAAGCCTTTAGTGTACGGGGCCATCTTG
CGGTTCGAAGGCCAGGCGTCTGTATTCAACTACAAGGGCGGGCCTAATTA
TCGGGACTTGCTGCCCGTTCCTCCTGCGCCGGGCGACGTGCCTTCCTGTG
CGGAAGGGGGCGTGCTGGGGGTGTTGCCAGGAATCATTGGTTGCATTCAG
GCCACAGAGACACTCAAGCTTCTCACAGGTGTTGGGAAGCCACTGTCCGG
TCGTATCCTCATATATAATGCCCTTGACATGACCTTCCGTGAGGTCGGCC
TGCAGCCGGACCCGAATACCCCCAAAATCACTTCCCTCATCGACTACGAT
TGCTTTTGCAGTAGCGGTAGTGGAACACAGCGACACCAAATGCAGCAAGG
ATTGTCTGAGCCGGTGTTCAAACGTGTGTCGGTCAAGGAGGCACGGCGCA
AGTTTGAGGAGGACGGTTGGGCCCCTTTTGTGCTGGACGTCCGGCTGCCA
CAGGAGGCGGAGATCGCCACGCTGCCTTTCAGTGACCTTCTCTGCCCGCA
TCGGGAAGTGGAACGAGTGGCAGCGCAGCTTCCGAGGGATCAGGACATTC
TTGTGTACTGCAAAGTGGGAGGCCGCTCGGCACAGGCTTGTCAAAAGTTA
GCAGCGTTGGGGTTTCCCAATGTGGTCAACCTAGACGGAGGCATTATAGC
GTGGGCACAAGAGATAGACGCACGATTGCCCGTGTACTAG back to top
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