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Properties
| Property Name | Value |
|---|
| TranscriptId | 591067 |
| Track | FilteredModels2 |
| ProteinId | 590981 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_12 | supercontig | scaffold_12:153454..154918 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_4972 ID=mRNA_4972|Name=jgi.p|Nanoce1779_2|590981|organism=Nannochloropsis oceanica|type=mRNA|length=1465bp
GTTGCGGCTTCCTCCGCTACCGCACCATCGCGGGCTTCCCGAGAGCAGCA
GAAGCAGCAGCAGCAAGAGCACGACCACGAGGGAGAGGAGGAGCACGAGA
AGGAGAAGGAGGGGCACGAGAAGGAGGAGGAGGGAGAGGAGAGGGAGGAA
GCAACAACTATCGACCTGACGGGTAGCAGCCCCTTAAATTCAGGCAGGCC
CACCCTCCCAAGCATCCATGCTCCGGCGGCCGCGGCAGCGATTGCGATGG
CGGGAAACAGGAACCTTGACAGGGGACGGGATGATGAGGTGGTATACGAT
AGCGAGGATGATCGCAGCAGTGATATGGCCGGTTCGGGGGAGGCGGCAGG
CCGTCCAAAGGACGATGGGGTGGGCGGAGGTGGCAGGCTTAAGGGGGTAT
GCAACGAAGAGGATAACGAGGAGGAGGAAGACGGCGTTCAAATTCAGTGC
GCCACTTGCACTTTTTTTAACGAACCAGACATGGACATCTGTCAGATGTG
TATGGCACCGCTGACCAATCAGGCCGGTGGTGGCGGGGGCGGTGGCATGG
AGGAACAGGAAAATGATGTGCGAGAACTTAACGCGCACGCCCGATGGACT
TGTCCATTGTGTACGTACGGCGGTAATACGAGAGGCAATTGGATTTGCCA
AGCCTGTGAGGTGGGGCGGCCCCGACGTCAAGATATGCTTGGCTCGACGA
ACAATGACGGGTACGTAATGGTATCGCCCGACGCGCTGAGTCGGGGCAGC
GGAGGGTGGGGGAGGCAAAGAGGCGGCGGGAGAGGAGGAGCTCAGGGGAT
GCTGGAGGCTGTGGTAACGGGGGCATTGTTTGGTGGAGGTGCAGCGGGAT
TAGGATCGGCCCTGGCAGGAGGCACAAGAGCGGATAGTCATCGTCGCATG
CTGATGGGCTCCCTGGTGGGAGGGTTAGGGGGAGGGATCTTGGGCTCTCA
GTTCCAGCAAATGACGATGATCCAACAGCAGGACGCTGTCGACAGAATGA
GCTACGAGGACTTGCTCAATTTATTCGGTCCTGGGCATGAGCCGCAGAAG
GCGAGTGAGGTCGCGGTCAGCGCACTTCCTGAGGTCACGGTGAGCAGCAC
GGAACTCGAGAGGATGCGGCGGGAAAGCATGGGGAATGCGCGCGACTGCA
GTGTGTGTATGGAAGAATTTGAGCTGGGTGACGTCACTAGGCGCCTGCCC
TGCTTGCACACGTATCACAAGGCGTGCATTGACCGGTGGCTACTTCAGTG
CAATGCCATGTGCCCTATCTGCAAGGTCCCCATTGCCCAGACATGAAGAA
TGAAAGATAAAGATGGAGGGCAGCGAGAGGGTGTAAGTAGACTTGGAGCC
AACACAAGGGATGGAAATAAGGAAGACTGAAAAACAAATGGGGAGAAGGA
CGGTAGGAGTTTCCAGCGAGAGAAATGAGGAAGGAAACTGAACTGTTCGT
ACCAACAAAGTCAGT back to topprotein sequence of jgi.p|Nanoce1779_2|590981 >mRNA_4972-protein ID=mRNA_4972-protein|Name=jgi.p|Nanoce1779_2|590981|organism=Nannochloropsis oceanica|type=polypeptide|length=350bp
MAGNRNLDRGRDDEVVYDSEDDRSSDMAGSGEAAGRPKDDGVGGGGRLKG
VCNEEDNEEEEDGVQIQCATCTFFNEPDMDICQMCMAPLTNQAGGGGGGG
MEEQENDVRELNAHARWTCPLCTYGGNTRGNWICQACEVGRPRRQDMLGS
TNNDGYVMVSPDALSRGSGGWGRQRGGGRGGAQGMLEAVVTGALFGGGAA
GLGSALAGGTRADSHRRMLMGSLVGGLGGGILGSQFQQMTMIQQQDAVDR
MSYEDLLNLFGPGHEPQKASEVAVSALPEVTVSSTELERMRRESMGNARD
CSVCMEEFELGDVTRRLPCLHTYHKACIDRWLLQCNAMCPICKVPIAQT* back to topmRNA from alignment at scaffold_12:153454..154918- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_4972 ID=mRNA_4972|Name=jgi.p|Nanoce1779_2|590981|organism=Nannochloropsis oceanica|type=mRNA|length=1465bp|location=Sequence derived from alignment at scaffold_12:153454..154918- (Nannochloropsis oceanica)
GTTGCGGCTTCCTCCGCTACCGCACCATCGCGGGCTTCCCGAGAGCAGCA
GAAGCAGCAGCAGCAAGAGCACGACCACGAGGGAGAGGAGGAGCACGAGA
AGGAGAAGGAGGGGCACGAGAAGGAGGAGGAGGGAGAGGAGAGGGAGGAA
GCAACAACTATCGACCTGACGGGTAGCAGCCCCTTAAATTCAGGCAGGCC
CACCCTCCCAAGCATCCATGCTCCGGCGGCCGCGGCAGCGATTGCGATGG
CGGGAAACAGGAACCTTGACAGGGGACGGGATGATGAGGTGGTATACGAT
AGCGAGGATGATCGCAGCAGTGATATGGCCGGTTCGGGGGAGGCGGCAGG
CCGTCCAAAGGACGATGGGGTGGGCGGAGGTGGCAGGCTTAAGGGGGTAT
GCAACGAAGAGGATAACGAGGAGGAGGAAGACGGCGTTCAAATTCAGTGC
GCCACTTGCACTTTTTTTAACGAACCAGACATGGACATCTGTCAGATGTG
TATGGCACCGCTGACCAATCAGGCCGGTGGTGGCGGGGGCGGTGGCATGG
AGGAACAGGAAAATGATGTGCGAGAACTTAACGCGCACGCCCGATGGACT
TGTCCATTGTGTACGTACGGCGGTAATACGAGAGGCAATTGGATTTGCCA
AGCCTGTGAGGTGGGGCGGCCCCGACGTCAAGATATGCTTGGCTCGACGA
ACAATGACGGGTACGTAATGGTATCGCCCGACGCGCTGAGTCGGGGCAGC
GGAGGGTGGGGGAGGCAAAGAGGCGGCGGGAGAGGAGGAGCTCAGGGGAT
GCTGGAGGCTGTGGTAACGGGGGCATTGTTTGGTGGAGGTGCAGCGGGAT
TAGGATCGGCCCTGGCAGGAGGCACAAGAGCGGATAGTCATCGTCGCATG
CTGATGGGCTCCCTGGTGGGAGGGTTAGGGGGAGGGATCTTGGGCTCTCA
GTTCCAGCAAATGACGATGATCCAACAGCAGGACGCTGTCGACAGAATGA
GCTACGAGGACTTGCTCAATTTATTCGGTCCTGGGCATGAGCCGCAGAAG
GCGAGTGAGGTCGCGGTCAGCGCACTTCCTGAGGTCACGGTGAGCAGCAC
GGAACTCGAGAGGATGCGGCGGGAAAGCATGGGGAATGCGCGCGACTGCA
GTGTGTGTATGGAAGAATTTGAGCTGGGTGACGTCACTAGGCGCCTGCCC
TGCTTGCACACGTATCACAAGGCGTGCATTGACCGGTGGCTACTTCAGTG
CAATGCCATGTGCCCTATCTGCAAGGTCCCCATTGCCCAGACATGAAGAA
TGAAAGATAAAGATGGAGGGCAGCGAGAGGGTGTAAGTAGACTTGGAGCC
AACACAAGGGATGGAAATAAGGAAGACTGAAAAACAAATGGGGAGAAGGA
CGGTAGGAGTTTCCAGCGAGAGAAATGAGGAAGGAAACTGAACTGTTCGT
ACCAACAAAGTCAGT back to topCoding sequence (CDS) from alignment at scaffold_12:153454..154918- >mRNA_4972 ID=mRNA_4972|Name=jgi.p|Nanoce1779_2|590981|organism=Nannochloropsis oceanica|type=CDS|length=1050bp|location=Sequence derived from alignment at scaffold_12:153454..154918- (Nannochloropsis oceanica)
ATGGCGGGAAACAGGAACCTTGACAGGGGACGGGATGATGAGGTGGTATA
CGATAGCGAGGATGATCGCAGCAGTGATATGGCCGGTTCGGGGGAGGCGG
CAGGCCGTCCAAAGGACGATGGGGTGGGCGGAGGTGGCAGGCTTAAGGGG
GTATGCAACGAAGAGGATAACGAGGAGGAGGAAGACGGCGTTCAAATTCA
GTGCGCCACTTGCACTTTTTTTAACGAACCAGACATGGACATCTGTCAGA
TGTGTATGGCACCGCTGACCAATCAGGCCGGTGGTGGCGGGGGCGGTGGC
ATGGAGGAACAGGAAAATGATGTGCGAGAACTTAACGCGCACGCCCGATG
GACTTGTCCATTGTGTACGTACGGCGGTAATACGAGAGGCAATTGGATTT
GCCAAGCCTGTGAGGTGGGGCGGCCCCGACGTCAAGATATGCTTGGCTCG
ACGAACAATGACGGGTACGTAATGGTATCGCCCGACGCGCTGAGTCGGGG
CAGCGGAGGGTGGGGGAGGCAAAGAGGCGGCGGGAGAGGAGGAGCTCAGG
GGATGCTGGAGGCTGTGGTAACGGGGGCATTGTTTGGTGGAGGTGCAGCG
GGATTAGGATCGGCCCTGGCAGGAGGCACAAGAGCGGATAGTCATCGTCG
CATGCTGATGGGCTCCCTGGTGGGAGGGTTAGGGGGAGGGATCTTGGGCT
CTCAGTTCCAGCAAATGACGATGATCCAACAGCAGGACGCTGTCGACAGA
ATGAGCTACGAGGACTTGCTCAATTTATTCGGTCCTGGGCATGAGCCGCA
GAAGGCGAGTGAGGTCGCGGTCAGCGCACTTCCTGAGGTCACGGTGAGCA
GCACGGAACTCGAGAGGATGCGGCGGGAAAGCATGGGGAATGCGCGCGAC
TGCAGTGTGTGTATGGAAGAATTTGAGCTGGGTGACGTCACTAGGCGCCT
GCCCTGCTTGCACACGTATCACAAGGCGTGCATTGACCGGTGGCTACTTC
AGTGCAATGCCATGTGCCCTATCTGCAAGGTCCCCATTGCCCAGACATGA back to top
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