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Properties
| Property Name | Value |
|---|
| TranscriptId | 591059 |
| Track | FilteredModels2 |
| ProteinId | 590973 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_12 | supercontig | scaffold_12:149793..151293 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_4970 ID=mRNA_4970|Name=jgi.p|Nanoce1779_2|590973|organism=Nannochloropsis oceanica|type=mRNA|length=1501bp
GATGGTTGAGCGGAGGCCAGGCATACGAGTCGAGAACGAAGAAGAAATAG
GAGGCGATGGACTCCTGGCCTCTTTTGGCCGGGAACGACAACCACCACCA
CGAAAGCCCATTCCCATTTCCATGAGTTAATGTTCTTGACTTGGGTGGAG
AAGTGAGGCTAGTGCACAAGACGGGTGGCTGTCGGCCCTTCTCACCTTAT
CTCTCCTCCCCAGCCGCACTCACCTGACCCGACCCACCACCACCTCTACC
AAGCCTTACCCCTGACTTAATCGCTCCTCCCACTTCTGTTGTCTTGCTTA
TATTACAGAGCCATGGGTATTACTCGTGACTCGCGTCACAAGCGCCGCCA
CACGGGCGGAAAGCGGCCCTCCTATCGCAAGAAGCGTAAGTTTGAGCTTG
GCAGGCCGGCGGCCATGACCAAATTGGTGCTGGGTCACGGTGAGAAACGT
GTGCACGTGGTGCGGGGACGAGGTGGGAATCTTAAGTTCCGCGCACTGCG
CCTGGAAACCGGCAATTTTGCGTGGCGCTCCGAGACCCAGGCGAAGAAGA
CCCGCATCCTAGATGTAGTTTACAACGCCTCCAACAACGAGCTGGTCCGC
ACTAAGACACTTGTCAAGAGCGCCGTCGTGCAGATCGACGCCACGCCCTT
CCGACAGTACTATGAGCAGCACTATGGCCAGGAGGTGGGCAGCAAGAAAA
AGAGGGGAGCGGTGGCCGCGGCCGCCAAGACCACCGAGACAGAGGCCGTC
AAGAAGTCTAACCACGCGCTTCGTAAACTGGCCAAGCGCAAGGGGGACCT
TGAGACGCATTTGGAGGAGCAGTTTGCATCCGGACGCTTGTTGGCCTGCA
TCACCTCCCGCCCAGGTCAGAGCGGCCGCGCCGACGGCTACATCTTGGAG
GGCAAGGAGCTGGAGTTCTACCAGAAGCAGCTGGCCAAGAAGAAGAAGGG
CCAGAAGTAACCAACAGTAGTGGTGAGAATGCTTGTGGCGCCCCGGGCCA
ATGAATTCTTCTGGTGAGGGGGCACGGGGCGTAGGGGGGACGGACAGGAT
GTGGAGGGAGGGCGCTTGGGGGTCTGTTCTTCTCTCTGGCCCTTGTGTCT
TCCCTTGACGGCTGCGGACATTGCTCTGTAAGAAAGGGGCTTAAAAAAAC
ATTCTTTAGCTTCGCGGTAACGATCAATTTCAACAAAACAACACAGCCAG
AAGAAGAACATGAAAAACTCCAACAAGACTATCGAGTGCAGCTCGAAGAA
TCGCTCTTATGTTCTCAGCTAGTTTTTCCTGTCTTCTTCGTGTCATATGT
GTGTGTTTTTTTACGGCGTCATTTTTCGTCAAAGCTGCGCGTCCGCAGTG
GTTGTAACAGCGACCCCGCTTCTTTTTATTCCCTTTTCAAGGCCTCGTTC
CTGTCCCTCTCCCGTCAGTGGAGCTAGACGCCTTGTTATGCACTCTCTGC
TTCTGCACCTACGCGGCGCCTCCTCCTCCTCTACCTATTCCTAATCCATG
C back to topprotein sequence of jgi.p|Nanoce1779_2|590973 >mRNA_4970-protein ID=mRNA_4970-protein|Name=jgi.p|Nanoce1779_2|590973|organism=Nannochloropsis oceanica|type=polypeptide|length=216bp
MGITRDSRHKRRHTGGKRPSYRKKRKFELGRPAAMTKLVLGHGEKRVHVV
RGRGGNLKFRALRLETGNFAWRSETQAKKTRILDVVYNASNNELVRTKTL
VKSAVVQIDATPFRQYYEQHYGQEVGSKKKRGAVAAAAKTTETEAVKKSN
HALRKLAKRKGDLETHLEEQFASGRLLACITSRPGQSGRADGYILEGKEL
EFYQKQLAKKKKGQK* back to topmRNA from alignment at scaffold_12:149793..151293- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_4970 ID=mRNA_4970|Name=jgi.p|Nanoce1779_2|590973|organism=Nannochloropsis oceanica|type=mRNA|length=1501bp|location=Sequence derived from alignment at scaffold_12:149793..151293- (Nannochloropsis oceanica)
GATGGTTGAGCGGAGGCCAGGCATACGAGTCGAGAACGAAGAAGAAATAG
GAGGCGATGGACTCCTGGCCTCTTTTGGCCGGGAACGACAACCACCACCA
CGAAAGCCCATTCCCATTTCCATGAGTTAATGTTCTTGACTTGGGTGGAG
AAGTGAGGCTAGTGCACAAGACGGGTGGCTGTCGGCCCTTCTCACCTTAT
CTCTCCTCCCCAGCCGCACTCACCTGACCCGACCCACCACCACCTCTACC
AAGCCTTACCCCTGACTTAATCGCTCCTCCCACTTCTGTTGTCTTGCTTA
TATTACAGAGCCATGGGTATTACTCGTGACTCGCGTCACAAGCGCCGCCA
CACGGGCGGAAAGCGGCCCTCCTATCGCAAGAAGCGTAAGTTTGAGCTTG
GCAGGCCGGCGGCCATGACCAAATTGGTGCTGGGTCACGGTGAGAAACGT
GTGCACGTGGTGCGGGGACGAGGTGGGAATCTTAAGTTCCGCGCACTGCG
CCTGGAAACCGGCAATTTTGCGTGGCGCTCCGAGACCCAGGCGAAGAAGA
CCCGCATCCTAGATGTAGTTTACAACGCCTCCAACAACGAGCTGGTCCGC
ACTAAGACACTTGTCAAGAGCGCCGTCGTGCAGATCGACGCCACGCCCTT
CCGACAGTACTATGAGCAGCACTATGGCCAGGAGGTGGGCAGCAAGAAAA
AGAGGGGAGCGGTGGCCGCGGCCGCCAAGACCACCGAGACAGAGGCCGTC
AAGAAGTCTAACCACGCGCTTCGTAAACTGGCCAAGCGCAAGGGGGACCT
TGAGACGCATTTGGAGGAGCAGTTTGCATCCGGACGCTTGTTGGCCTGCA
TCACCTCCCGCCCAGGTCAGAGCGGCCGCGCCGACGGCTACATCTTGGAG
GGCAAGGAGCTGGAGTTCTACCAGAAGCAGCTGGCCAAGAAGAAGAAGGG
CCAGAAGTAACCAACAGTAGTGGTGAGAATGCTTGTGGCGCCCCGGGCCA
ATGAATTCTTCTGGTGAGGGGGCACGGGGCGTAGGGGGGACGGACAGGAT
GTGGAGGGAGGGCGCTTGGGGGTCTGTTCTTCTCTCTGGCCCTTGTGTCT
TCCCTTGACGGCTGCGGACATTGCTCTGTAAGAAAGGGGCTTAAAAAAAC
ATTCTTTAGCTTCGCGGTAACGATCAATTTCAACAAAACAACACAGCCAG
AAGAAGAACATGAAAAACTCCAACAAGACTATCGAGTGCAGCTCGAAGAA
TCGCTCTTATGTTCTCAGCTAGTTTTTCCTGTCTTCTTCGTGTCATATGT
GTGTGTTTTTTTACGGCGTCATTTTTCGTCAAAGCTGCGCGTCCGCAGTG
GTTGTAACAGCGACCCCGCTTCTTTTTATTCCCTTTTCAAGGCCTCGTTC
CTGTCCCTCTCCCGTCAGTGGAGCTAGACGCCTTGTTATGCACTCTCTGC
TTCTGCACCTACGCGGCGCCTCCTCCTCCTCTACCTATTCCTAATCCATG
C back to topCoding sequence (CDS) from alignment at scaffold_12:149793..151293- >mRNA_4970 ID=mRNA_4970|Name=jgi.p|Nanoce1779_2|590973|organism=Nannochloropsis oceanica|type=CDS|length=648bp|location=Sequence derived from alignment at scaffold_12:149793..151293- (Nannochloropsis oceanica)
ATGGGTATTACTCGTGACTCGCGTCACAAGCGCCGCCACACGGGCGGAAA
GCGGCCCTCCTATCGCAAGAAGCGTAAGTTTGAGCTTGGCAGGCCGGCGG
CCATGACCAAATTGGTGCTGGGTCACGGTGAGAAACGTGTGCACGTGGTG
CGGGGACGAGGTGGGAATCTTAAGTTCCGCGCACTGCGCCTGGAAACCGG
CAATTTTGCGTGGCGCTCCGAGACCCAGGCGAAGAAGACCCGCATCCTAG
ATGTAGTTTACAACGCCTCCAACAACGAGCTGGTCCGCACTAAGACACTT
GTCAAGAGCGCCGTCGTGCAGATCGACGCCACGCCCTTCCGACAGTACTA
TGAGCAGCACTATGGCCAGGAGGTGGGCAGCAAGAAAAAGAGGGGAGCGG
TGGCCGCGGCCGCCAAGACCACCGAGACAGAGGCCGTCAAGAAGTCTAAC
CACGCGCTTCGTAAACTGGCCAAGCGCAAGGGGGACCTTGAGACGCATTT
GGAGGAGCAGTTTGCATCCGGACGCTTGTTGGCCTGCATCACCTCCCGCC
CAGGTCAGAGCGGCCGCGCCGACGGCTACATCTTGGAGGGCAAGGAGCTG
GAGTTCTACCAGAAGCAGCTGGCCAAGAAGAAGAAGGGCCAGAAGTAA back to top
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