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Properties
| Property Name | Value |
|---|
| TranscriptId | 591052 |
| Track | FilteredModels2 |
| ProteinId | 590966 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_12 | supercontig | scaffold_12:148370..149817 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_4969 ID=mRNA_4969|Name=jgi.p|Nanoce1779_2|590966|organism=Nannochloropsis oceanica|type=mRNA|length=1147bp
TCGGAGTATGAGGCATCCTGTGATTGGTTCATTTGAACCCATTCGTCGTC
TGTCGTCCCGTGCAGGTTCGACCTCCTACCCCTTTTTTCACCCTTCACCT
TCCTTCATACATCCATTCGTCCACGGACACCCCACCAGACAGTGTACTGC
TTGATGCAGCCGTTCTTTACAGAACGACGACGAAGCACGCCCACATCTAC
GGTTTCTTTCCTTTTAGGGTTCTTTGTTATGGTTTTCAGTCGCGGTCAGG
TCGCGGCGGCAGCGACGACGCGAGTCTTTACCTTGAGTGACCAAACACGC
CTGCAGATTAAGGTGGGAGATTTGACGAAAGCGGCCGTTGGCGCCATAGT
GAACGCGGCGAACGAGCGGATGTTGGGTGGAGGCGGGGTGGACGGGGCCA
TCCATCGGGCAGCAGGGCCTAGGCTTTACGACGCGTGCAAGGCAGTGCCC
GAAATCACGCCGGGTGTTCGTTGTCCTACGGGGGAAGCCCGCCTCACGCC
AGGCTTTGAGTTGCCGGCATCTTTCGTCGTGCATACGGTGGGTCCGGTGT
ACGAGAATGACTTTGTGTCGGCCCCCTTGCTTCGGGCCTGTCACCAGAGC
TCTCTCGGATTGGCCTCGAGAGAAGGTGTGGCATCGGTGGCTTTCCCAGC
CATTTCATGTGGAATCTACGGGTATCCGGCATCGAAAGCTGCACGCATTG
CTGTCCAAAGTTGCATTGACTTCATCAGGGAACAGGATTCTACATCCCCG
CTTCAAAACATCGAGTTTATCCTATTCTCACAAGAAAATTTCACTGCCTG
GGTCGCTGCCGCGGAGGAGCTCACCCAACCTAGCTCCCGCGGCGCAGAAA
CCTGTCCAACCATCGAAAGCTGAGATGCAGCGACCAATTGCAGCGTCCTC
ATCATCACTTCAGCCAGATGATTTGACTCCAGCCATTGGAAATCCTTCTG
CGAGCAAGCAGCCGCAACAGCACCGGCAGCAACAGCACCGGCAGCAACGG
CACTGCCAGCTAAAGAAGCAGAACGAAATCAGGGGGGAGGGGGGACGGAC
AAAAATTTCAACAGCCACACCTGTAGTGCCACTGCAAGTTGAATGAAGTA
CAGAAGGAAGCAGTAGAAGAGGGCATGGATTAGGAATAGGTAGAGGA back to topprotein sequence of jgi.p|Nanoce1779_2|590966 >mRNA_4969-protein ID=mRNA_4969-protein|Name=jgi.p|Nanoce1779_2|590966|organism=Nannochloropsis oceanica|type=polypeptide|length=240bp
MQPFFTERRRSTPTSTVSFLLGFFVMVFSRGQVAAAATTRVFTLSDQTRL
QIKVGDLTKAAVGAIVNAANERMLGGGGVDGAIHRAAGPRLYDACKAVPE
ITPGVRCPTGEARLTPGFELPASFVVHTVGPVYENDFVSAPLLRACHQSS
LGLASREGVASVAFPAISCGIYGYPASKAARIAVQSCIDFIREQDSTSPL
QNIEFILFSQENFTAWVAAAEELTQPSSRGAETCPTIES* back to topmRNA from alignment at scaffold_12:148370..149817+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_4969 ID=mRNA_4969|Name=jgi.p|Nanoce1779_2|590966|organism=Nannochloropsis oceanica|type=mRNA|length=1448bp|location=Sequence derived from alignment at scaffold_12:148370..149817+ (Nannochloropsis oceanica)
TCGGAGTATGAGGCATCCTGTGATTGGTTCATTTGAACCCATTCGTCGTC
TGTCGTCCCGTGCAGGTTCGACCTCCTACCCCTTTTTTCACCCTTCACCT
TCCTTCATACATCCATTCGTCCACGGACACCCCACCAGACAGTGTACTGC
TTGATGCAGCCGTTCTTTACAGAACGACGACGAAGCACGCCCACATCTAC
GGTTTCTTTCCTTTTAGGGTTCTTTGTTATGGTTTTCAGTCGCGGTCAGG
TCGCGGCGGCAGCGACGACGCGAGTCTTTACCTTGAGTGACCAAACACGC
CTGCAGATTAAGGTGGGAGATTTGACGAAAGCGGCCGTTGGCGCCATAGT
GAACGCGGCGAACGAGCGGATGTTGGGTGGAGGCGGGGTGGACGGGGCCA
TCCATCGGGCAGCAGGGCCTAGGCTTTACGACGCGTGCAAGGCAGTGCCC
GAAATCACGCCGGGTGTTCGTTGTCCTACGGGGGAAGCCCGCCTCACGCC
AGGCTTTGAGTTGCCGGCATCTTTCGTCGTGCATACGGTGGGTCCGGTGT
ACGAGAATGACTTTGTGTCGGCCCCCTTGCTTCGGGCCTGTCACCAGAGC
TCTCTCGGATTGGCCTCGAGAGAAGGTGTGGCATCGGTGGCTTTCCCAGC
CATTTCATGTGGAATCTACGGGTATCCGGCATCGAAAGCTGCACGCATTG
CTGTCCAAAGTTGCATTGACTTCATCAGGGAACAGGTGAGCTGGGGGAAA
TGAGGCGGGATAAGGCATGCGCTTGAAGAATGAAGAGAGCAGGAAAAAAA
TCTTTCTTTTGCGAAAAGCGTGTGCACGAATCCCGCCAGTCGAAGCAGTA
TTGAATAAATGAATGATCACATCCATATAAATATAACCAGGATTCTACAT
CCCCGCTTCAAAACATCGAGTTTATCCTATTCTCACAAGAAAATTTCACT
GCCTGGGTCGCTGCCGCGGAGGAGCTCACCCAACCTAGCTCCCGCGGCGC
AGAAACCTGTCCAACCATCGAAAGCTGAGATGCAGCGACCAATTGCAGCG
TCCTCATCATCACTTCAGCCAGATGATTTGACTCCAGCCATTGGAAATCC
TTCTGCGAGCAAGCAGCCGCAACAGCACCGGCAGCAACAGCACCGGCAGC
AACGGCACTGCCAGCTAAAGAAGCAGAACGAAATCAGGGGGGAGGGGGGA
CGGACAAAAATTTCAACAGCCACACCTGTAGTGCCACTGCAAGTTGAATG
AAGTACAGAAGGAAGTGAGGAAAGGGATGGATGGGATTTGGCCCAGAACT
GTCACATCCTCTTCAAGTATCGCAATTCGTTGTCTTCTTTCACCTCGGTC
GTTGTTGCCCACTCACTGTCGCCCCACGTTGTATCTCTCCTCCTTTTCAC
GCTATGACAGGCAGTAGAAGAGGGCATGGATTAGGAATAGGTAGAGGA back to topCoding sequence (CDS) from alignment at scaffold_12:148370..149817+ >mRNA_4969 ID=mRNA_4969|Name=jgi.p|Nanoce1779_2|590966|organism=Nannochloropsis oceanica|type=CDS|length=1440bp|location=Sequence derived from alignment at scaffold_12:148370..149817+ (Nannochloropsis oceanica)
ATGCAGCCGTTCTTTACAGAACGACGACGAAGCACGCCCACATCTACGGT
TTCTTTCCTTTTAGGGTTCTTTGTTATGGTTTTCAGTCGCGGTCAGGTCG
CGGCGGCAGCGACGACGCGAGTCTTTACCTTGAGTGACCAAACACGCCTG
CAGATTAAGGTGGGAGATTTGACGAAAGCGGCCGTTGGCGCCATAGTGAA
CGCGGCGAACGAGCGGATGTTGGGTGGAGGCGGGGTGGACGGGGCCATCC
ATCGGGCAGCAGGGCCTAGGCTTTACGACGCGTGCAAGGCAGTGCCCGAA
ATCACGCCGGGTGTTCGTTGTCCTACGGGGGAAGCCCGCCTCACGCCAGG
CTTTGAGTTGCCGGCATCTTTCGTCGTGCATACGGTGGGTCCGGTGTACG
AGAATGACTTTGTGTCGGCCCCCTTGCTTCGGGCCTGTCACCAGAGCTCT
CTCGGATTGGCCTCGAGAGAAGGTGTGGCATCGGTGGCTTTCCCAGCCAT
TTCATGTGGAATCTACGGGTATCCGGCATCGAAAGCTGCACGCATTGCTG
TCCAAAGTTGCATTGACTTCATCAGGGAACAGGATTCTACATCCCCGCTT
CAAAACATCGAGTTTATCCTATTCTCACAAGAAAATTTCACTGCCTGGGT
CGCTGCCGCGGAGGAGCTCACCCAACCTAGCTCCCGCGGCGCAGAAACCT
GTCCAACCATCGAAAGCTGAATGCAGCCGTTCTTTACAGAACGACGACGA
AGCACGCCCACATCTACGGTTTCTTTCCTTTTAGGGTTCTTTGTTATGGT
TTTCAGTCGCGGTCAGGTCGCGGCGGCAGCGACGACGCGAGTCTTTACCT
TGAGTGACCAAACACGCCTGCAGATTAAGGTGGGAGATTTGACGAAAGCG
GCCGTTGGCGCCATAGTGAACGCGGCGAACGAGCGGATGTTGGGTGGAGG
CGGGGTGGACGGGGCCATCCATCGGGCAGCAGGGCCTAGGCTTTACGACG
CGTGCAAGGCAGTGCCCGAAATCACGCCGGGTGTTCGTTGTCCTACGGGG
GAAGCCCGCCTCACGCCAGGCTTTGAGTTGCCGGCATCTTTCGTCGTGCA
TACGGTGGGTCCGGTGTACGAGAATGACTTTGTGTCGGCCCCCTTGCTTC
GGGCCTGTCACCAGAGCTCTCTCGGATTGGCCTCGAGAGAAGGTGTGGCA
TCGGTGGCTTTCCCAGCCATTTCATGTGGAATCTACGGGTATCCGGCATC
GAAAGCTGCACGCATTGCTGTCCAAAGTTGCATTGACTTCATCAGGGAAC
AGGATTCTACATCCCCGCTTCAAAACATCGAGTTTATCCTATTCTCACAA
GAAAATTTCACTGCCTGGGTCGCTGCCGCGGAGGAGCTCACCCAACCTAG
CTCCCGCGGCGCAGAAACCTGTCCAACCATCGAAAGCTGA back to top
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