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Properties
| Property Name | Value |
|---|
| TranscriptId | 630755 |
| Track | FilteredModels2 |
| ProteinId | 630669 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_12 | supercontig | scaffold_12:104975..106724 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_4950 ID=mRNA_4950|Name=jgi.p|Nanoce1779_2|630669|organism=Nannochloropsis oceanica|type=mRNA|length=1716bp
ACAGTTCTTTCTTCTTCTTTGCATGATGAAGTTCACCGCTGCCATCGCTG
TCGCGGCCCTTGCCAGCGCCAGCGCCTTTGTCGCTCCTGCCCCCTTGGCT
TCCCGTGCTGGCCCCCTGGCCGCTGCGGGTAAGGATGTCGGCTCTGTGGG
GCCCAACGAGTACGTGCCTGCCGGCTTGACCCGCGCACAGTGGGCGGAGA
TCAAGGCGAAGGACGCGGCCAAGAAGGCGACGAAGAAGGCCAAGCCCGCA
AAGGTTGAGTCTTTGGACGAGTGGCAGAAGGCTTTTGAGGCCGGGAAGAC
CGGCCACCGCTTCGCTAAGGTGAAGGATGACTCCTGGTTCAAGTCCAGGT
AAGCTCCGAAGCACATTATGAGGAAGCAACGCCACGCAAAAGGTGAATGT
GCCCATGTCGTCTTGTCGTGGCTGCCCTGCTTTCTTCTCTCCTGTTTCCA
ACCCTCAATCGTGGGCGTAAAACGCGTGCGTTGTCGATACGTGTCGAGAG
AGGAGGTGTAGGGAGAAATGTAAGGTGGAAAGGCCAATACGATTAACTGG
GTGCATGTATTATTCTGCGTCTGATGCATTCTAAGTAGGTGGTGTGTTGT
CCATATGAGACCAGATAAAAGTAAGGTGCCGACGGAGATAGGGGTGAGTA
GACAGACTTTATCATGTACCGGAGGATTCTGTGTCATTGTTGAAAGAGAG
AATGGAAGTGAGATGTGCGTATTGGAGAGGTGAATCTATAGAGAAGAAGA
GAGAGAGAGAGAGAGAGAGAGTACGACCCTCTGAGTGTGCAAGGAGCGAC
CCTTCCTTGACCTGGTGAACGGACAGGAAAAAGGTCTAATGTGTTCGGAA
GAAGACGAAGAATGCGGAGTGAAGAAAGCGGAAGAGTTTTGAATCTTCTT
GGAATGTATCTTCCCGTTGCACGCGGCGACCTTTTGGTACAATACGAAGA
AGAAACAAACCTGGTCTCCACCTGCTACCAAGGCAAGCCGCCGAACACTC
ATCCGTTTAGAATGCTTCACATGCTTTGCTCTAGTCCGTGTCCCGTCAAA
ACTTTCTCCCTTCTCAGTGTGACTCTCTTGTTGTGCCCACAGTGTGACTC
TTCTTGTGCCCACAGCAGGTGGTCGAGGACTCGGTGTATCTATATGTACA
AATATGCAAACACTAAGAAGGAAGAGAAATAGTTCATTCTGATGCCCATC
CACCAGCGACATCGACTTGACAATAGCATTCCCATCTCCAAAAAGAGTAC
CTGCTTCTTTGTCCCCTTTTTGGCCGGAGATGTTCCATCTCTGTCATAGT
TCTTCTTTCTCCGTCTCTACTGTAGCGCTGCAGCCATTAAAAAATAACCA
AGGCTCATCTCCTCTCCACTAAAATCAAAACTGCATTTTTTTAGTTTTCA
TCCCCCGTGTCTGTTTCTCCATCTGATAGAGATGTGTCCGTCTTCTTTTG
TCTTCTTTTTCTCCTCACTTTCCTTTCTCTCCTTTTTCTTCTTTTCTCTT
CCTCTTCTTTCCACTGCCCCAAATGATTCAGGGTGACGTTACAGTCGCTG
CATCTTCCTCAATCCACCAGGCATCCCTCTCTCCCTCTTTTAACCCTCTA
CATTTATTTTCCATTCTCCAAGAGTGCACTCGCACCCCGAGATACTTCAC
ACCCGCAGGTGCACAATCCGTCTTATTTCTCACCAATGTCCCTTCCTCAC
TCACCCCCCCTCCTCT back to topprotein sequence of jgi.p|Nanoce1779_2|630669 >mRNA_4950-protein ID=mRNA_4950-protein|Name=jgi.p|Nanoce1779_2|630669|organism=Nannochloropsis oceanica|type=polypeptide|length=110bp
MMKFTAAIAVAALASASAFVAPAPLASRAGPLAAAGKDVGSVGPNEYVPA
GLTRAQWAEIKAKDAAKKATKKAKPAKVESLDEWQKAFEAGKTGHRFAKV
KDDSWFKSR* back to topmRNA from alignment at scaffold_12:104975..106724- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_4950 ID=mRNA_4950|Name=jgi.p|Nanoce1779_2|630669|organism=Nannochloropsis oceanica|type=mRNA|length=1750bp|location=Sequence derived from alignment at scaffold_12:104975..106724- (Nannochloropsis oceanica)
ACAGTTCTTTCTTCTTCTTTGCATGATGAAGTTCACCGCTGCCATCGCTG
TCGCGGCCCTTGCCAGCGCCAGCGCCTTTGTCGCTCCTGCCCCCTTGGCT
TCCCGTGCTGGCCCCCTGGCCGCTGCGGGTAAGGATGTCGGCTCTGTGGG
GCCCAACGAGTACGTGCCTGCCGGCTTGACCCGCGCACAGTGGGCGGAGA
TCAAGGCGAAGGACGCGGCCAAGAAGGCGACGAAGAAGGCCAAGCCCGCA
AAGGTTGAGTCTTTGGACGAGTGGCAGAAGGCTTTTGAGGCCGGGAAGAC
CGGCCACCGCTTCGCTAAGGTGAAGGATGACTCCTGGTTCAAGTCCAGGT
AAGCTCCGAAGCACATTATGAGGAAGCAACGCCACGCAAAAGGTGAATGT
GCCCATGTCGTCTTGTCGTGGCTGCCCTGCTTTCTTCTCTCCTGTTTCCA
ACCCTCAATCGTGGGCGTAAAACGCGTGCGTTGTCGATACGTGTCGAGAG
AGGAGGTGTAGGGAGAAATGTAAGGTGGAAAGGCCAATACGATTAACTGG
GTGCATGTATTATTCTGCGTCTGATGCATTCTAAGTAGGTGGTGTGTTGT
CCATATGAGACCAGATAAAAGTAAGGTGCCGACGGAGATAGGGGTGAGTA
GACAGACTTTATCATGTACCGGAGGATTCTGTGTCATTGTTGAAAGAGAG
AATGGAAGTGAGATGTGCGTATTGGAGAGGTGAATCTATAGAGAAGAAGA
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
GAGAGTACGACCCTCTGAGTGTGCAAGGAGCGACCCTTCCTTGACCTGGT
GAACGGACAGGAAAAAGGTCTAATGTGTTCGGAAGAAGACGAAGAATGCG
GAGTGAAGAAAGCGGAAGAGTTTTGAATCTTCTTGGAATGTATCTTCCCG
TTGCACGCGGCGACCTTTTGGTACAATACGAAGAAGAAACAAACCTGGTC
TCCACCTGCTACCAAGGCAAGCCGCCGAACACTCATCCGTTTAGAATGCT
TCACATGCTTTGCTCTAGTCCGTGTCCCGTCAAAACTTTCTCCCTTCTCA
GTGTGACTCTCTTGTTGTGCCCACAGTGTGACTCTTCTTGTGCCCACAGC
AGGTGGTCGAGGACTCGGTGTATCTATATGTACAAATATGCAAACACTAA
GAAGGAAGAGAAATAGTTCATTCTGATGCCCATCCACCAGCGACATCGAC
TTGACAATAGCATTCCCATCTCCAAAAAGAGTACCTGCTTCTTTGTCCCC
TTTTTGGCCGGAGATGTTCCATCTCTGTCATAGTTCTTCTTTCTCCGTCT
CTACTGTAGCGCTGCAGCCATTAAAAAATAACCAAGGCTCATCTCCTCTC
CACTAAAATCAAAACTGCATTTTTTTAGTTTTCATCCCCCGTGTCTGTTT
CTCCATCTGATAGAGATGTGTCCGTCTTCTTTTGTCTTCTTTTTCTCCTC
ACTTTCCTTTCTCTCCTTTTTCTTCTTTTCTCTTCCTCTTCTTTCCACTG
CCCCAAATGATTCAGGGTGACGTTACAGTCGCTGCATCTTCCTCAATCCA
CCAGGCATCCCTCTCTCCCTCTTTTAACCCTCTACATTTATTTTCCATTC
TCCAAGAGTGCACTCGCACCCCGAGATACTTCACACCCGCAGGTGCACAA
TCCGTCTTATTTCTCACCAATGTCCCTTCCTCACTCACCCCCCCTCCTCT
back to topCoding sequence (CDS) from alignment at scaffold_12:104975..106724- >mRNA_4950 ID=mRNA_4950|Name=jgi.p|Nanoce1779_2|630669|organism=Nannochloropsis oceanica|type=CDS|length=330bp|location=Sequence derived from alignment at scaffold_12:104975..106724- (Nannochloropsis oceanica)
ATGATGAAGTTCACCGCTGCCATCGCTGTCGCGGCCCTTGCCAGCGCCAG
CGCCTTTGTCGCTCCTGCCCCCTTGGCTTCCCGTGCTGGCCCCCTGGCCG
CTGCGGGTAAGGATGTCGGCTCTGTGGGGCCCAACGAGTACGTGCCTGCC
GGCTTGACCCGCGCACAGTGGGCGGAGATCAAGGCGAAGGACGCGGCCAA
GAAGGCGACGAAGAAGGCCAAGCCCGCAAAGGTTGAGTCTTTGGACGAGT
GGCAGAAGGCTTTTGAGGCCGGGAAGACCGGCCACCGCTTCGCTAAGGTG
AAGGATGACTCCTGGTTCAAGTCCAGGTAA back to top
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