Properties
Property Name | Value |
TranscriptId | 577561 |
Track | FilteredModels2 |
ProteinId | 577475 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_3 | supercontig | scaffold_3:1195299..1196387 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_494 ID=mRNA_494|Name=jgi.p|Nanoce1779_2|577475|organism=Nannochloropsis oceanica|type=mRNA|length=1089bp GGGGGAGGGTGTGCCTGCTCGACGAGTAACAGAGTGGGGGCAGGAAGGGA TGAAAAATCGGGTAAATGTGCGATTTACGGTGGAGATTAAGAAGTTGAAA AGATATATCGATGCGCAACAAAGAGAGACGTGTGGAGTGGGGATCACTGT CTTGCATGTCGCAATGCGAGCCTTGGGGCTGGCGCTGCGAGAGGTGCCTG CATTGAATGGTCATCGGGTGTTTGGGGAATTCAAGCCTTCACGCACGACT GATGTGTCTTGTGAGCTAAGGTTGAGAGATGGCCGTTTTGCTCTGTTAAA GGTGGGGGAGGTGGATGTGAAATCCCTTGCAGATATCTCGAGGACGCTGT CGTTGAAATCACAGGCGTTGAGCCATGGTCGTGATGTGTTTTATAACCGG CGTTTGCTCATCTCACGGTGGTGTCCCTCATTCCTCCTTCCTTCTCTTGA AGCTTGTTTTACTGTCTTGGGGGCAGGGTTAGGATTGAGTCTGCCGTGGT TGGGCGTACGGGCCTTCCCACAGGGAGGATGTGTGGTTCTCACCTCTCCT GCTGTTACCGCTAGTAGGGGCTTCGCTTGCGAGGCTGATTTTGAAGTAAC TCCTGCAGCGACGCCGAGCGCCGCGTTCCTCGCTCCTCTGGTTTTGACCA TCGGAGCGATCAGTGCTGTTCCCAAGGCAGTGGGCGGGCCAAGGGGAGGG CAGCAGCGGCAGCAGCAGGAAAGGGAGGTGATTTTGTCGCCGGTGCTGAA TGTGTCGATTCAGGCGCAGCTGCAGGGAGGGGCGTCGTCGTTGCAGCATG TACGGAGACTGACAGAGCTGGTTCACAAATATATGAATGACCCGAGGTCA TGCGAGGAGGACGCACTCAAGTCTGCTACGGCTGCTGTCACTGCGCCAGC AGCCGTATCTGTCTGACACGGGGCAAGGGCAAAAGGAGGAGGAGAGGGAG GAGAAGGAGAAGGTAGAGGGAAGCAAATGTAATAGCAGTATTGTATGTTT TTTTTTTTGCATAATTAGATAAGGGGGATGGAAGAGACAGGAGATAAGAC CAAATGTTAGGAAGAAAAGCAATTTCAAATGGTTATGCA back to topprotein sequence of jgi.p|Nanoce1779_2|577475 >mRNA_494-protein ID=mRNA_494-protein|Name=jgi.p|Nanoce1779_2|577475|organism=Nannochloropsis oceanica|type=polypeptide|length=289bp MKNRVNVRFTVEIKKLKRYIDAQQRETCGVGITVLHVAMRALGLALREVP ALNGHRVFGEFKPSRTTDVSCELRLRDGRFALLKVGEVDVKSLADISRTL SLKSQALSHGRDVFYNRRLLISRWCPSFLLPSLEACFTVLGAGLGLSLPW LGVRAFPQGGCVVLTSPAVTASRGFACEADFEVTPAATPSAAFLAPLVLT IGAISAVPKAVGGPRGGQQRQQQEREVILSPVLNVSIQAQLQGGASSLQH VRRLTELVHKYMNDPRSCEEDALKSATAAVTAPAAVSV* back to topmRNA from alignment at scaffold_3:1195299..1196387- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_494 ID=mRNA_494|Name=jgi.p|Nanoce1779_2|577475|organism=Nannochloropsis oceanica|type=mRNA|length=1089bp|location=Sequence derived from alignment at scaffold_3:1195299..1196387- (Nannochloropsis oceanica) GGGGGAGGGTGTGCCTGCTCGACGAGTAACAGAGTGGGGGCAGGAAGGGA
TGAAAAATCGGGTAAATGTGCGATTTACGGTGGAGATTAAGAAGTTGAAA
AGATATATCGATGCGCAACAAAGAGAGACGTGTGGAGTGGGGATCACTGT
CTTGCATGTCGCAATGCGAGCCTTGGGGCTGGCGCTGCGAGAGGTGCCTG
CATTGAATGGTCATCGGGTGTTTGGGGAATTCAAGCCTTCACGCACGACT
GATGTGTCTTGTGAGCTAAGGTTGAGAGATGGCCGTTTTGCTCTGTTAAA
GGTGGGGGAGGTGGATGTGAAATCCCTTGCAGATATCTCGAGGACGCTGT
CGTTGAAATCACAGGCGTTGAGCCATGGTCGTGATGTGTTTTATAACCGG
CGTTTGCTCATCTCACGGTGGTGTCCCTCATTCCTCCTTCCTTCTCTTGA
AGCTTGTTTTACTGTCTTGGGGGCAGGGTTAGGATTGAGTCTGCCGTGGT
TGGGCGTACGGGCCTTCCCACAGGGAGGATGTGTGGTTCTCACCTCTCCT
GCTGTTACCGCTAGTAGGGGCTTCGCTTGCGAGGCTGATTTTGAAGTAAC
TCCTGCAGCGACGCCGAGCGCCGCGTTCCTCGCTCCTCTGGTTTTGACCA
TCGGAGCGATCAGTGCTGTTCCCAAGGCAGTGGGCGGGCCAAGGGGAGGG
CAGCAGCGGCAGCAGCAGGAAAGGGAGGTGATTTTGTCGCCGGTGCTGAA
TGTGTCGATTCAGGCGCAGCTGCAGGGAGGGGCGTCGTCGTTGCAGCATG
TACGGAGACTGACAGAGCTGGTTCACAAATATATGAATGACCCGAGGTCA
TGCGAGGAGGACGCACTCAAGTCTGCTACGGCTGCTGTCACTGCGCCAGC
AGCCGTATCTGTCTGACACGGGGCAAGGGCAAAAGGAGGAGGAGAGGGAG
GAGAAGGAGAAGGTAGAGGGAAGCAAATGTAATAGCAGTATTGTATGTTT
TTTTTTTTGCATAATTAGATAAGGGGGATGGAAGAGACAGGAGATAAGAC
CAAATGTTAGGAAGAAAAGCAATTTCAAATGGTTATGCA back to topCoding sequence (CDS) from alignment at scaffold_3:1195299..1196387- >mRNA_494 ID=mRNA_494|Name=jgi.p|Nanoce1779_2|577475|organism=Nannochloropsis oceanica|type=CDS|length=867bp|location=Sequence derived from alignment at scaffold_3:1195299..1196387- (Nannochloropsis oceanica) ATGAAAAATCGGGTAAATGTGCGATTTACGGTGGAGATTAAGAAGTTGAA AAGATATATCGATGCGCAACAAAGAGAGACGTGTGGAGTGGGGATCACTG TCTTGCATGTCGCAATGCGAGCCTTGGGGCTGGCGCTGCGAGAGGTGCCT GCATTGAATGGTCATCGGGTGTTTGGGGAATTCAAGCCTTCACGCACGAC TGATGTGTCTTGTGAGCTAAGGTTGAGAGATGGCCGTTTTGCTCTGTTAA AGGTGGGGGAGGTGGATGTGAAATCCCTTGCAGATATCTCGAGGACGCTG TCGTTGAAATCACAGGCGTTGAGCCATGGTCGTGATGTGTTTTATAACCG GCGTTTGCTCATCTCACGGTGGTGTCCCTCATTCCTCCTTCCTTCTCTTG AAGCTTGTTTTACTGTCTTGGGGGCAGGGTTAGGATTGAGTCTGCCGTGG TTGGGCGTACGGGCCTTCCCACAGGGAGGATGTGTGGTTCTCACCTCTCC TGCTGTTACCGCTAGTAGGGGCTTCGCTTGCGAGGCTGATTTTGAAGTAA CTCCTGCAGCGACGCCGAGCGCCGCGTTCCTCGCTCCTCTGGTTTTGACC ATCGGAGCGATCAGTGCTGTTCCCAAGGCAGTGGGCGGGCCAAGGGGAGG GCAGCAGCGGCAGCAGCAGGAAAGGGAGGTGATTTTGTCGCCGGTGCTGA ATGTGTCGATTCAGGCGCAGCTGCAGGGAGGGGCGTCGTCGTTGCAGCAT GTACGGAGACTGACAGAGCTGGTTCACAAATATATGAATGACCCGAGGTC ATGCGAGGAGGACGCACTCAAGTCTGCTACGGCTGCTGTCACTGCGCCAG CAGCCGTATCTGTCTGA back to top
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