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Properties
| Property Name | Value |
|---|
| TranscriptId | 590958 |
| Track | FilteredModels2 |
| ProteinId | 590872 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_12 | supercontig | scaffold_12:73860..75001 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_4937 ID=mRNA_4937|Name=jgi.p|Nanoce1779_2|590872|organism=Nannochloropsis oceanica|type=mRNA|length=867bp
AATAGATGCGTTTTGAAGCTGTATTATTGGTCCTTGCTGCCTGCACACCC
GCAGCTAGCTTCATGATGCCCATTAGCCGTCGTGCCTCAGGCCAGGTCGT
CAAGGCCGCCGTGGCCTTCCGCCCCTTCGGCTCTCAGGCGACGCTGAAGC
GTGGTGCACCCCAGATGAAAGAGCTGGTCAGCCGCCAGGAGCACCTACGC
GCAGCCACATTGGGCTCCTTGCTGGGGGGCCTTGCGCTCTTCGCGTCGGG
GGGTGGACCTGCTCGCGCGGATGACTCTGGGTTCCAGGTATCCGAGTCGG
GCCTCAAGTCCAAGATCATTAAGGAAGGCACGGGCGCCATTCCTTCTGCT
GGGCAATCCGTTAAGGTTCACTACACGGGTTGGTTGGACGACTTCGAGTC
TCCCAAGAAGTTCGACTCTTCCTACGACCGTGGAAAGCCCTTGTCCTTCC
GCGCGGGCGTCGGGCAGGTCATCGCGGGTTGGGATGAGGCCTTGCTGCAG
ATGAAGATTGGAGAGAAGAGGAATGTGATCATTCCCCCTGGATTGGGGTA
CGGTGCGCGAGGGGCGGGGGGAGTGATTCCTCCGAATGCCACGCTCTACT
TCACGATGGAGTTGAAAAGCATCGGTTAAGGTGGTAAAAAAGCAGGAGAA
TGGATGGATCGAATCGTGCGTCCCATTAGCACTTGAAGTGCCTATAGGGG
GAGAAAAAGAGTGGGAAACATTGAGGAAGCAGCGTATTGGAGCCTGCCAG
CAGGTCTCTGAAGGGAGACAAGAGGGAAGAGAGAACTTTGATAGACGAAG
CAAGATGGCGTATGCTTGCATGCATTAATGCTGAAGAAGAAAGAAGAAAA
CAACAACATAAGCGCGA back to topprotein sequence of jgi.p|Nanoce1779_2|590872 >mRNA_4937-protein ID=mRNA_4937-protein|Name=jgi.p|Nanoce1779_2|590872|organism=Nannochloropsis oceanica|type=polypeptide|length=208bp
MRFEAVLLVLAACTPAASFMMPISRRASGQVVKAAVAFRPFGSQATLKRG
APQMKELVSRQEHLRAATLGSLLGGLALFASGGGPARADDSGFQVSESGL
KSKIIKEGTGAIPSAGQSVKVHYTGWLDDFESPKKFDSSYDRGKPLSFRA
GVGQVIAGWDEALLQMKIGEKRNVIIPPGLGYGARGAGGVIPPNATLYFT
MELKSIG* back to topmRNA from alignment at scaffold_12:73860..75001+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_4937 ID=mRNA_4937|Name=jgi.p|Nanoce1779_2|590872|organism=Nannochloropsis oceanica|type=mRNA|length=1142bp|location=Sequence derived from alignment at scaffold_12:73860..75001+ (Nannochloropsis oceanica)
AATAGATGCGTTTTGAAGCTGTATTATTGGTCCTTGCTGCCTGCACACCC
GCAGCTAGCTTCATGATGCCCATTAGCCGTCGTGCCTCAGGCCAGGTCGT
CAAGGCCGCCGTGGCCTTCCGCCCCTTCGGCTCTCAGGTGAACATGGCGG
GGAGAGAGGGTTAGAGTGTCGGGAGGGTTGGATGGTGAAAAGCAAGATGG
ACTGGGACGGGAGGTTTTGGAGGCCGCATCCGCACGCATCTTAAATGTGC
ATTGAATTTATAAATCGACATTCACCTCTCTCTACGACCAGGCGACGCTG
AAGCGTGGTGCACCCCAGATGAAAGAGCTGGTCAGCCGCCAGGAGCACCT
ACGCGCAGCCACATTGGGCTCCTTGCTGGGGGGCCTTGCGCTCTTCGCGT
CGGGGGGTGGACCTGCTCGCGCGGATGACTCTGGGTTCCAGGTATCCGAG
TCGGGCCTCAAGTCCAAGATCATTAAGGAAGGCACGGGCGCCATTCCTTC
TGCTGGTGGGTTTTAGGCTGTCGGAAGGAAAGTGGTGTAGAGGTGTGCTG
TGGCACAAGAAAAATACCTCGCCATCTACCACATACTCACATGCCCCTCC
TCCTCCTTAACCCCCTACCCTAACAGGGCAATCCGTTAAGGTTCACTACA
CGGGTTGGTTGGACGACTTCGAGTCTCCCAAGAAGTTCGACTCTTCCTAC
GACCGTGGAAAGCCCTTGTCCTTCCGCGCGGGCGTCGGGCAGGTCATCGC
GGGTTGGGATGAGGCCTTGCTGCAGATGAAGATTGGAGAGAAGAGGAATG
TGATCATTCCCCCTGGATTGGGGTACGGTGCGCGAGGGGCGGGGGGAGTG
ATTCCTCCGAATGCCACGCTCTACTTCACGATGGAGTTGAAAAGCATCGG
TTAAGGTGGTAAAAAAGCAGGAGAATGGATGGATCGAATCGTGCGTCCCA
TTAGCACTTGAAGTGCCTATAGGGGGAGAAAAAGAGTGGGAAACATTGAG
GAAGCAGCGTATTGGAGCCTGCCAGCAGGTCTCTGAAGGGAGACAAGAGG
GAAGAGAGAACTTTGATAGACGAAGCAAGATGGCGTATGCTTGCATGCAT
TAATGCTGAAGAAGAAAGAAGAAAACAACAACATAAGCGCGA back to topCoding sequence (CDS) from alignment at scaffold_12:73860..75001+ >mRNA_4937 ID=mRNA_4937|Name=jgi.p|Nanoce1779_2|590872|organism=Nannochloropsis oceanica|type=CDS|length=1872bp|location=Sequence derived from alignment at scaffold_12:73860..75001+ (Nannochloropsis oceanica)
ATGCGTTTTGAAGCTGTATTATTGGTCCTTGCTGCCTGCACACCCGCAGC
TAGCTTCATGATGCCCATTAGCCGTCGTGCCTCAGGCCAGGTCGTCAAGG
CCGCCGTGGCCTTCCGCCCCTTCGGCTCTCAGGCGACGCTGAAGCGTGGT
GCACCCCAGATGAAAGAGCTGGTCAGCCGCCAGGAGCACCTACGCGCAGC
CACATTGGGCTCCTTGCTGGGGGGCCTTGCGCTCTTCGCGTCGGGGGGTG
GACCTGCTCGCGCGGATGACTCTGGGTTCCAGGTATCCGAGTCGGGCCTC
AAGTCCAAGATCATTAAGGAAGGCACGGGCGCCATTCCTTCTGCTGGGCA
ATCCGTTAAGGTTCACTACACGGGTTGGTTGGACGACTTCGAGTCTCCCA
AGAAGTTCGACTCTTCCTACGACCGTGGAAAGCCCTTGTCCTTCCGCGCG
GGCGTCGGGCAGGTCATCGCGGGTTGGGATGAGGCCTTGCTGCAGATGAA
GATTGGAGAGAAGAGGAATGTGATCATTCCCCCTGGATTGGGGTACGGTG
CGCGAGGGGCGGGGGGAGTGATTCCTCCGAATGCCACGCTCTACTTCACG
ATGGAGTTGAAAAGCATCGGTTAAATGCGTTTTGAAGCTGTATTATTGGT
CCTTGCTGCCTGCACACCCGCAGCTAGCTTCATGATGCCCATTAGCCGTC
GTGCCTCAGGCCAGGTCGTCAAGGCCGCCGTGGCCTTCCGCCCCTTCGGC
TCTCAGGCGACGCTGAAGCGTGGTGCACCCCAGATGAAAGAGCTGGTCAG
CCGCCAGGAGCACCTACGCGCAGCCACATTGGGCTCCTTGCTGGGGGGCC
TTGCGCTCTTCGCGTCGGGGGGTGGACCTGCTCGCGCGGATGACTCTGGG
TTCCAGGTATCCGAGTCGGGCCTCAAGTCCAAGATCATTAAGGAAGGCAC
GGGCGCCATTCCTTCTGCTGGGCAATCCGTTAAGGTTCACTACACGGGTT
GGTTGGACGACTTCGAGTCTCCCAAGAAGTTCGACTCTTCCTACGACCGT
GGAAAGCCCTTGTCCTTCCGCGCGGGCGTCGGGCAGGTCATCGCGGGTTG
GGATGAGGCCTTGCTGCAGATGAAGATTGGAGAGAAGAGGAATGTGATCA
TTCCCCCTGGATTGGGGTACGGTGCGCGAGGGGCGGGGGGAGTGATTCCT
CCGAATGCCACGCTCTACTTCACGATGGAGTTGAAAAGCATCGGTTAAAT
GCGTTTTGAAGCTGTATTATTGGTCCTTGCTGCCTGCACACCCGCAGCTA
GCTTCATGATGCCCATTAGCCGTCGTGCCTCAGGCCAGGTCGTCAAGGCC
GCCGTGGCCTTCCGCCCCTTCGGCTCTCAGGCGACGCTGAAGCGTGGTGC
ACCCCAGATGAAAGAGCTGGTCAGCCGCCAGGAGCACCTACGCGCAGCCA
CATTGGGCTCCTTGCTGGGGGGCCTTGCGCTCTTCGCGTCGGGGGGTGGA
CCTGCTCGCGCGGATGACTCTGGGTTCCAGGTATCCGAGTCGGGCCTCAA
GTCCAAGATCATTAAGGAAGGCACGGGCGCCATTCCTTCTGCTGGGCAAT
CCGTTAAGGTTCACTACACGGGTTGGTTGGACGACTTCGAGTCTCCCAAG
AAGTTCGACTCTTCCTACGACCGTGGAAAGCCCTTGTCCTTCCGCGCGGG
CGTCGGGCAGGTCATCGCGGGTTGGGATGAGGCCTTGCTGCAGATGAAGA
TTGGAGAGAAGAGGAATGTGATCATTCCCCCTGGATTGGGGTACGGTGCG
CGAGGGGCGGGGGGAGTGATTCCTCCGAATGCCACGCTCTACTTCACGAT
GGAGTTGAAAAGCATCGGTTAA back to top
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