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Properties
| Property Name | Value |
|---|
| TranscriptId | 590877 |
| Track | FilteredModels2 |
| ProteinId | 590791 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_12 | supercontig | scaffold_12:7927..10624 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_4911 ID=mRNA_4911|Name=jgi.p|Nanoce1779_2|590791|organism=Nannochloropsis oceanica|type=mRNA|length=853bp
ACAGAAACATAACCTCTTATCAATCGTATTCAATAAAGTGTCTCAAGTAA
CATAAATGTTGTCATCCTTCCGCCTTGCCGTGTCTCGTCATGTGTCCTCG
TCCTCTCTCCGTCCGTCCCTCCTTCCCACCACCAGCAACGCAACCCGTCG
TCTCGCCACAGCCTTTGCAGAGGAAGACAAAGCCTTCCATGTATCTAACC
TGTTAGCAGCCAAGAAAAAGGCAGGCTTAACATTCGACGAAATTGCGGTC
GAGACGGGTTTGACAAATGCCTATGTCGCCCAGCTCTTCTACCGTCAGGC
ACACCTTAAGCCCGAGACCGCAAAGAAAATGAAGGCAGCCGTGCCAACTC
TCACAACGGACGACTTGGAAGTGATGCAGGAGGTGCCTTTCAGGTCGTAT
GATCGTGCCGTGTTGCGGACTGAGCCTTTGATATACAGGCTGGAGGAAGC
TGTGCTGCACTATGGCATGGGGATCAAGGCCATCGTGAACGAAAAATTCG
GGGATGGGATCATGTCCGCGATTGACATGTACGCCACCGTCGAGAAAGTC
AAGGGCTCGCAAGGCGAGGACCGAGTTTTGGTGACCCTGAATGGGAAATT
TTTGCCCCATGTGGAGCAAAGGGTTGAGAACAATGTGCAGGCACCGGTGG
TCGAGGAGGGGGGGGTTAAAAAAACAACGCGATAGTAGCAGCCGTAGGAG
TAGCAGCAACCTTCCGGGAATGAAGGGAGGAAGGAAGGAGGAGGAGGGAG
GGAGGGAAGGAGGGAGTGAAGGAGGAGTACCTCTGGACGGTAGTCAGGAT
GTGAAGTAGAGGCAAGGACGCGGTAAGGAAATCAAGAGTAGAGATAGGAA
AAG back to topprotein sequence of jgi.p|Nanoce1779_2|590791 >mRNA_4911-protein ID=mRNA_4911-protein|Name=jgi.p|Nanoce1779_2|590791|organism=Nannochloropsis oceanica|type=polypeptide|length=210bp
MLSSFRLAVSRHVSSSSLRPSLLPTTSNATRRLATAFAEEDKAFHVSNLL
AAKKKAGLTFDEIAVETGLTNAYVAQLFYRQAHLKPETAKKMKAAVPTLT
TDDLEVMQEVPFRSYDRAVLRTEPLIYRLEEAVLHYGMGIKAIVNEKFGD
GIMSAIDMYATVEKVKGSQGEDRVLVTLNGKFLPHVEQRVENNVQAPVVE
EGGVKKTTR* back to topmRNA from alignment at scaffold_12:7927..10624- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_4911 ID=mRNA_4911|Name=jgi.p|Nanoce1779_2|590791|organism=Nannochloropsis oceanica|type=mRNA|length=2698bp|location=Sequence derived from alignment at scaffold_12:7927..10624- (Nannochloropsis oceanica)
ACAGAAACATAACCTCTTATCAATCGTATTCAATAAAGTGTCTCAAGTAA
CATAAATGTTGTCATCCTTCCGCCTTGCCGTGTCTCGTCATGTGTCCTCG
TCCTCTCTCCGTCCGTCCCTCCTTCCCACCACCAGCAACGCAACCCGTCG
TCTCGCCACAGCCTTTGCAGAGGAAGACAAAGCCTTCCATGTATCTAACC
TGTTAGCAGCCAAGAAAAAGGCAGGCTTAACATTCGACGAAATTGCGGTC
GAGACGGGTTTGACAAATGCCTATGTCGCCCAGGTAGGTAGGAAAGGGGA
GGAGAGCGGCGTTGAAACGCTTGCTCATTTTGTCGTTAACGGCCAAATGT
GACCACGCTTAGACACAATCTCCAAATTTTATGAGCGGTCTCAGAACATT
GGCGAGCAACAGCACTCACCCTTTCCTACCTCACTCCCTCTCTTCTCTCT
TCCTCCCGTCCTCCCTTCCTCCCTTCCTCCCTTTCTTTCTCTCTCCCTCC
GTCATCCCCGAAGCTCTTCTACCGTCAGGCACACCTTAAGCCCGAGACCG
CAAAGAAAATGAAGGCAGCCGTGCCAACTCTCACAACGGACGACTTGGAA
GTGATGCAGGAGGTAACGAACCACTGCGAAGGGAGGGGAGGACGGAGGGT
GAGAAGGAAATATAGAAAGAGAGGAATAAGAGAAGGCTTACTCCTTTGAT
CGATATTATAAATATACGTACATGGAATTCTTTAGGTGCCTTTCAGGTCG
TATGATCGTGCCGTGTTGCGGACTGAGCCTTTGATATACAGGCTGGAGGA
AGCTGTGCTGCACTATGGCATGGGTAAGAACATTTATTTATTTAATTTCA
TATTTCATATTTATATATTATTTTATCTTAATCTACCTGTTTATAAATAA
ATTCATGTACCCTTAACAATCGACATGTAAAAAAAGGGAAGGAGATTCGT
GCAAGGAAACGAAAAAGCCAAATCAGAGATGGATGCGAGGGAGGGGAAGA
GGAAGGGAGGGGAAGAGGGGAAGAGGGAGCGAGGGATAGAAAGAGGTCGG
GAGGAAAGCATACTCCAAAAGTGTTTTACACAATGACCGGTCTTCCCGGT
CGTTGACACTGTGCATTTCCTCCCTATCTTCCTCTCCTCTCCTGCTTTCC
TTTCCTCTCTCTTCACCCTTTCTTTTCTCCTTCCCTCCCTCCCTCCTTGA
TGACACACTTTTGCGTGCACCAAGAAGAGTACTTAAGTAATTGGTGGGCA
TGCCCCTTTGAGCGCGGATCAGGCCTATATCTATTTCTCCATCCTCATTA
CGTATCCATATCTCCCGTATCTTCCCTTCTTATTCCTCCCTCCCTCCTCT
TGTTCTGCCTCCTCCCTCCTTTTTTACCGTCCTTTTCTGTTCTGATGTAA
GATATATGTAAATATCATGACTGTCATATATCTCCTTTCCGCGCGCCCTT
TTTCGGTCAAAAAGGCACAGCTCACACGCATGCGCATGCGTCGGGAGCGG
GAGGTGGTGGGACTACCATGCGATTCCATGCTCCGCCTTCCCTGTGTGCC
GTACGATACACCCTGTGTGCCGTACGATACATATGTATATATATATATAC
ATAAGCAACCATATAACATGGTATATATGGTTGCTTATATATATATATAT
ACATAAGCAGCTATATAACATGAACAAACCAATAAATCGATAAATATATA
TATACACATACAAGCAACCATATAACATGAATAAATCGACAAATGAATAA
ATAAACAGATAAACTTATATGTAGACACCGGAGTAAACAATGCAGGCCAT
GATTAGACTCGAATGACTTTTCAATTACCCAAGGCGGGGGCAAAAAGCCT
ATCACCGACGTGCGGGACCAATTAATAACTACACTTGAACTGAGCCGCTT
CCGACTACATGCATGCACGAGGGAGGGAAGGAGGAAGGGAGAAATGACAT
TATTGCGTACATGCACGAGGGAGGGAAGGAGGAAAAGAGAAGATAAGTGG
AACAGGACCTTCCTCTGACAGAACGCTCACTTTCACCGTCTTCCTTCATC
TCATTCTCTCGATTTATACAAACAGGGATCAAGGCCATCGTGAACGAAAA
ATTCGGGGATGGTACGTCCTTTCGGGCATGGGGATGCTTTCCCTCCCTCC
CTCCCTCCCTCCTCCCATCCCCCCCTCCCTCTCTCCCTCCCTCCCTCCCT
CCCTCCAATCCTTCCTTCTCTTACTCGCCCTTGACCTCCCACCCCCCCCA
CACTCTCTCTTTTACTTTCTATTACAAAAAATGAAACATGATTGTGTTTC
ATCCCCTTTCCTTCCCCTCCCTCCCCTCCCTCCTCTTCGCCCTGCCCTCA
GGGATCATGTCCGCGATTGACATGTACGCCACCGTCGAGAAAGTCAAGGG
CTCGCAAGGCGAGGACCGAGTTTTGGTGACCCTGAATGGGAAATTTTTGC
CCCATGTGGAGCAAAGGGTTGAGAACAATGTGCAGGCACCGGTGGTCGAG
GAGGGGGGGGTTAAAAAAACAACGCGATAGTAGCAGCCGTAGGAGTAGCA
GCAACCTTCCGGGAATGAAGGGAGGAAGGAAGGAGGAGGAGGGAGGGAGG
GAAGGAGGGAGTGAAGGAGGAGTACCTCTGGACGGTAGTCAGGATGTGAA
GTAGAGGCAAGGACGCGGTAAGGAAATCAAGAGTAGAGATAGGAAAAG back to topCoding sequence (CDS) from alignment at scaffold_12:7927..10624- >mRNA_4911 ID=mRNA_4911|Name=jgi.p|Nanoce1779_2|590791|organism=Nannochloropsis oceanica|type=CDS|length=3150bp|location=Sequence derived from alignment at scaffold_12:7927..10624- (Nannochloropsis oceanica)
GGATCATGTCCGCGATTGACATGTACGCCACCGTCGAGAAAGTCAAGGGC
TCGCAAGGCGAGGACCGAGTTTTGGTGACCCTGAATGGGAAATTTTTGCC
CCATGTGGAGCAAAGGGTTGAGAACAATGTGCAGGCACCGGTGGTCGAGG
AGGGGGGGGTTAAAAAAACAACGCGATAGGGATCAAGGCCATCGTGAACG
AAAAATTCGGGGATGGTGCCTTTCAGGTCGTATGATCGTGCCGTGTTGCG
GACTGAGCCTTTGATATACAGGCTGGAGGAAGCTGTGCTGCACTATGGCA
TGGCTCTTCTACCGTCAGGCACACCTTAAGCCCGAGACCGCAAAGAAAAT
GAAGGCAGCCGTGCCAACTCTCACAACGGACGACTTGGAAGTGATGCAGG
AGATGTTGTCATCCTTCCGCCTTGCCGTGTCTCGTCATGTGTCCTCGTCC
TCTCTCCGTCCGTCCCTCCTTCCCACCACCAGCAACGCAACCCGTCGTCT
CGCCACAGCCTTTGCAGAGGAAGACAAAGCCTTCCATGTATCTAACCTGT
TAGCAGCCAAGAAAAAGGCAGGCTTAACATTCGACGAAATTGCGGTCGAG
ACGGGTTTGACAAATGCCTATGTCGCCCAGGGATCATGTCCGCGATTGAC
ATGTACGCCACCGTCGAGAAAGTCAAGGGCTCGCAAGGCGAGGACCGAGT
TTTGGTGACCCTGAATGGGAAATTTTTGCCCCATGTGGAGCAAAGGGTTG
AGAACAATGTGCAGGCACCGGTGGTCGAGGAGGGGGGGGTTAAAAAAACA
ACGCGATAGGGATCAAGGCCATCGTGAACGAAAAATTCGGGGATGGTGCC
TTTCAGGTCGTATGATCGTGCCGTGTTGCGGACTGAGCCTTTGATATACA
GGCTGGAGGAAGCTGTGCTGCACTATGGCATGGCTCTTCTACCGTCAGGC
ACACCTTAAGCCCGAGACCGCAAAGAAAATGAAGGCAGCCGTGCCAACTC
TCACAACGGACGACTTGGAAGTGATGCAGGAGATGTTGTCATCCTTCCGC
CTTGCCGTGTCTCGTCATGTGTCCTCGTCCTCTCTCCGTCCGTCCCTCCT
TCCCACCACCAGCAACGCAACCCGTCGTCTCGCCACAGCCTTTGCAGAGG
AAGACAAAGCCTTCCATGTATCTAACCTGTTAGCAGCCAAGAAAAAGGCA
GGCTTAACATTCGACGAAATTGCGGTCGAGACGGGTTTGACAAATGCCTA
TGTCGCCCAGGGATCATGTCCGCGATTGACATGTACGCCACCGTCGAGAA
AGTCAAGGGCTCGCAAGGCGAGGACCGAGTTTTGGTGACCCTGAATGGGA
AATTTTTGCCCCATGTGGAGCAAAGGGTTGAGAACAATGTGCAGGCACCG
GTGGTCGAGGAGGGGGGGGTTAAAAAAACAACGCGATAGGGATCAAGGCC
ATCGTGAACGAAAAATTCGGGGATGGTGCCTTTCAGGTCGTATGATCGTG
CCGTGTTGCGGACTGAGCCTTTGATATACAGGCTGGAGGAAGCTGTGCTG
CACTATGGCATGGCTCTTCTACCGTCAGGCACACCTTAAGCCCGAGACCG
CAAAGAAAATGAAGGCAGCCGTGCCAACTCTCACAACGGACGACTTGGAA
GTGATGCAGGAGATGTTGTCATCCTTCCGCCTTGCCGTGTCTCGTCATGT
GTCCTCGTCCTCTCTCCGTCCGTCCCTCCTTCCCACCACCAGCAACGCAA
CCCGTCGTCTCGCCACAGCCTTTGCAGAGGAAGACAAAGCCTTCCATGTA
TCTAACCTGTTAGCAGCCAAGAAAAAGGCAGGCTTAACATTCGACGAAAT
TGCGGTCGAGACGGGTTTGACAAATGCCTATGTCGCCCAGGGATCATGTC
CGCGATTGACATGTACGCCACCGTCGAGAAAGTCAAGGGCTCGCAAGGCG
AGGACCGAGTTTTGGTGACCCTGAATGGGAAATTTTTGCCCCATGTGGAG
CAAAGGGTTGAGAACAATGTGCAGGCACCGGTGGTCGAGGAGGGGGGGGT
TAAAAAAACAACGCGATAGGGATCAAGGCCATCGTGAACGAAAAATTCGG
GGATGGTGCCTTTCAGGTCGTATGATCGTGCCGTGTTGCGGACTGAGCCT
TTGATATACAGGCTGGAGGAAGCTGTGCTGCACTATGGCATGGCTCTTCT
ACCGTCAGGCACACCTTAAGCCCGAGACCGCAAAGAAAATGAAGGCAGCC
GTGCCAACTCTCACAACGGACGACTTGGAAGTGATGCAGGAGATGTTGTC
ATCCTTCCGCCTTGCCGTGTCTCGTCATGTGTCCTCGTCCTCTCTCCGTC
CGTCCCTCCTTCCCACCACCAGCAACGCAACCCGTCGTCTCGCCACAGCC
TTTGCAGAGGAAGACAAAGCCTTCCATGTATCTAACCTGTTAGCAGCCAA
GAAAAAGGCAGGCTTAACATTCGACGAAATTGCGGTCGAGACGGGTTTGA
CAAATGCCTATGTCGCCCAGGGATCATGTCCGCGATTGACATGTACGCCA
CCGTCGAGAAAGTCAAGGGCTCGCAAGGCGAGGACCGAGTTTTGGTGACC
CTGAATGGGAAATTTTTGCCCCATGTGGAGCAAAGGGTTGAGAACAATGT
GCAGGCACCGGTGGTCGAGGAGGGGGGGGTTAAAAAAACAACGCGATAGG
GATCAAGGCCATCGTGAACGAAAAATTCGGGGATGGTGCCTTTCAGGTCG
TATGATCGTGCCGTGTTGCGGACTGAGCCTTTGATATACAGGCTGGAGGA
AGCTGTGCTGCACTATGGCATGGCTCTTCTACCGTCAGGCACACCTTAAG
CCCGAGACCGCAAAGAAAATGAAGGCAGCCGTGCCAACTCTCACAACGGA
CGACTTGGAAGTGATGCAGGAGATGTTGTCATCCTTCCGCCTTGCCGTGT
CTCGTCATGTGTCCTCGTCCTCTCTCCGTCCGTCCCTCCTTCCCACCACC
AGCAACGCAACCCGTCGTCTCGCCACAGCCTTTGCAGAGGAAGACAAAGC
CTTCCATGTATCTAACCTGTTAGCAGCCAAGAAAAAGGCAGGCTTAACAT
TCGACGAAATTGCGGTCGAGACGGGTTTGACAAATGCCTATGTCGCCCAG back to top
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