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Properties
| Property Name | Value |
|---|
| TranscriptId | 447125 |
| Track | FilteredModels2 |
| ProteinId | 447039 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_9 | supercontig | scaffold_9:941742..943012 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_4901 ID=mRNA_4901|Name=jgi.p|Nanoce1779_2|447039|organism=Nannochloropsis oceanica|type=mRNA|length=1271bp
TGCTTGCTGTCACTATGCCGGTACAATGGAATGGTGTCCGAGGCACAACC
TGCAAGGATGCGGGAAGGGTGGGGGTGGTATTGTATGACTCGGATGGGCA
TGCTACGCCCACAGCTTCACTTACTGTCGATCCAGCTGCTCATTCGACAA
ATTTATAAAATAGCAAGCTGTTAATTTTTCGATGCATAAGGTAGCGCAAA
TAATTACCATAGTTCCTGGCGGTCCGTGCCTTGGTGGGGTGGGCACGTAG
AAGCGCGGGAAGGAGGTCGATGAATTCACCGTCGACTTCGTCGTCATCAC
ATTCTCAAAAAGCACCACATCCACATACATGTCAAAGACACGAGCCATCG
CGCCACTTTCCAACATGAGCAGCACCAGCTGGACCAGTAGTGCCTCCCGC
AAAAACCGTCGCCGCCCCTTCCCTGAGGTGTGGCAAGCTTTGGAGGACAA
AGAAGATGAGACTCAGGAAGAAGAAATCAAGCAACGAGTGCACGCAAGCC
GAAAAGCTACCACACGGCAGCACCACCATCACCAGCAGCACCAGCAACGC
GATGATGACGACGGGGATGATAATGCATCCGACGACGAATATGCGAATGA
AGTAAAGGAAGAGGACGACGAGGACGACGAGGAGCAGAAAGGCGACAGTG
AAGCCTCCCGCCCGTCTGACTCCTCCTCTTTAGCGCTCATTTCCGGTGGC
AGTGGCGGCGGCGACAGTAGCAGGAGCCACCGTCCCACCAAACGCCATCG
TCCCCGTCGTCGCTTCTCGCACATCAAGAGTGATATTTTGGGCTCCAAGA
CCTTGGTAAGACGGGCGCAGGAAGAAGCCCGCCTACGATCCTCCCGGTCC
TCCGCGAGCAAGTGGCAGCGGTTGTTGGAGGGTGTGTGCGGCGGGGCGGG
GACACTGGGGACCTTAGCCTCGGTGGGCTTGATGGCGCGGAAGACAACTG
GTGAGCAGGAGATGCGGGAGGCGGGGGGGTGTGGCGGCGGTTTGGGGGGT
GAAAATGCTTTGGCTGGGACAAGAGATAGGAATAGGCTGAGGTATCGAAT
CTCAATCTGCACTCAAACGCATTCATTCACGCCCATCTCTCTCCTATTTA
TTTCCAAGGTGCCTCAACGGCGTTTGTGGCTTTGTCGGCTCTTGCCTCCT
TCTCCTTTGTCTGGCGTGGGGCCGTGCGTCGACGAGGGGAGGAGGCGGAA
CGACGCTTGAGTCAGCTGGCTGCTCTAGAAGACGACCCGTACGTGACTCC
TGTATATATATATATATATAT back to topprotein sequence of jgi.p|Nanoce1779_2|447039 >mRNA_4901-protein ID=mRNA_4901-protein|Name=jgi.p|Nanoce1779_2|447039|organism=Nannochloropsis oceanica|type=polypeptide|length=294bp
MSKTRAIAPLSNMSSTSWTSSASRKNRRRPFPEVWQALEDKEDETQEEEI
KQRVHASRKATTRQHHHHQQHQQRDDDDGDDNASDDEYANEVKEEDDEDD
EEQKGDSEASRPSDSSSLALISGGSGGGDSSRSHRPTKRHRPRRRFSHIK
SDILGSKTLVRRAQEEARLRSSRSSASKWQRLLEGVCGGAGTLGTLASVG
LMARKTTGEQEMREAGGCGGGLGGENALAGTRDRNRLRYRISICTQTHSF
TPISLLFISKVPQRRLWLCRLLPPSPLSGVGPCVDEGRRRNDA* back to topmRNA from alignment at scaffold_9:941742..943012- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_4901 ID=mRNA_4901|Name=jgi.p|Nanoce1779_2|447039|organism=Nannochloropsis oceanica|type=mRNA|length=1271bp|location=Sequence derived from alignment at scaffold_9:941742..943012- (Nannochloropsis oceanica)
TGCTTGCTGTCACTATGCCGGTACAATGGAATGGTGTCCGAGGCACAACC
TGCAAGGATGCGGGAAGGGTGGGGGTGGTATTGTATGACTCGGATGGGCA
TGCTACGCCCACAGCTTCACTTACTGTCGATCCAGCTGCTCATTCGACAA
ATTTATAAAATAGCAAGCTGTTAATTTTTCGATGCATAAGGTAGCGCAAA
TAATTACCATAGTTCCTGGCGGTCCGTGCCTTGGTGGGGTGGGCACGTAG
AAGCGCGGGAAGGAGGTCGATGAATTCACCGTCGACTTCGTCGTCATCAC
ATTCTCAAAAAGCACCACATCCACATACATGTCAAAGACACGAGCCATCG
CGCCACTTTCCAACATGAGCAGCACCAGCTGGACCAGTAGTGCCTCCCGC
AAAAACCGTCGCCGCCCCTTCCCTGAGGTGTGGCAAGCTTTGGAGGACAA
AGAAGATGAGACTCAGGAAGAAGAAATCAAGCAACGAGTGCACGCAAGCC
GAAAAGCTACCACACGGCAGCACCACCATCACCAGCAGCACCAGCAACGC
GATGATGACGACGGGGATGATAATGCATCCGACGACGAATATGCGAATGA
AGTAAAGGAAGAGGACGACGAGGACGACGAGGAGCAGAAAGGCGACAGTG
AAGCCTCCCGCCCGTCTGACTCCTCCTCTTTAGCGCTCATTTCCGGTGGC
AGTGGCGGCGGCGACAGTAGCAGGAGCCACCGTCCCACCAAACGCCATCG
TCCCCGTCGTCGCTTCTCGCACATCAAGAGTGATATTTTGGGCTCCAAGA
CCTTGGTAAGACGGGCGCAGGAAGAAGCCCGCCTACGATCCTCCCGGTCC
TCCGCGAGCAAGTGGCAGCGGTTGTTGGAGGGTGTGTGCGGCGGGGCGGG
GACACTGGGGACCTTAGCCTCGGTGGGCTTGATGGCGCGGAAGACAACTG
GTGAGCAGGAGATGCGGGAGGCGGGGGGGTGTGGCGGCGGTTTGGGGGGT
GAAAATGCTTTGGCTGGGACAAGAGATAGGAATAGGCTGAGGTATCGAAT
CTCAATCTGCACTCAAACGCATTCATTCACGCCCATCTCTCTCCTATTTA
TTTCCAAGGTGCCTCAACGGCGTTTGTGGCTTTGTCGGCTCTTGCCTCCT
TCTCCTTTGTCTGGCGTGGGGCCGTGCGTCGACGAGGGGAGGAGGCGGAA
CGACGCTTGAGTCAGCTGGCTGCTCTAGAAGACGACCCGTACGTGACTCC
TGTATATATATATATATATAT back to topCoding sequence (CDS) from alignment at scaffold_9:941742..943012- >mRNA_4901 ID=mRNA_4901|Name=jgi.p|Nanoce1779_2|447039|organism=Nannochloropsis oceanica|type=CDS|length=882bp|location=Sequence derived from alignment at scaffold_9:941742..943012- (Nannochloropsis oceanica)
ATGTCAAAGACACGAGCCATCGCGCCACTTTCCAACATGAGCAGCACCAG
CTGGACCAGTAGTGCCTCCCGCAAAAACCGTCGCCGCCCCTTCCCTGAGG
TGTGGCAAGCTTTGGAGGACAAAGAAGATGAGACTCAGGAAGAAGAAATC
AAGCAACGAGTGCACGCAAGCCGAAAAGCTACCACACGGCAGCACCACCA
TCACCAGCAGCACCAGCAACGCGATGATGACGACGGGGATGATAATGCAT
CCGACGACGAATATGCGAATGAAGTAAAGGAAGAGGACGACGAGGACGAC
GAGGAGCAGAAAGGCGACAGTGAAGCCTCCCGCCCGTCTGACTCCTCCTC
TTTAGCGCTCATTTCCGGTGGCAGTGGCGGCGGCGACAGTAGCAGGAGCC
ACCGTCCCACCAAACGCCATCGTCCCCGTCGTCGCTTCTCGCACATCAAG
AGTGATATTTTGGGCTCCAAGACCTTGGTAAGACGGGCGCAGGAAGAAGC
CCGCCTACGATCCTCCCGGTCCTCCGCGAGCAAGTGGCAGCGGTTGTTGG
AGGGTGTGTGCGGCGGGGCGGGGACACTGGGGACCTTAGCCTCGGTGGGC
TTGATGGCGCGGAAGACAACTGGTGAGCAGGAGATGCGGGAGGCGGGGGG
GTGTGGCGGCGGTTTGGGGGGTGAAAATGCTTTGGCTGGGACAAGAGATA
GGAATAGGCTGAGGTATCGAATCTCAATCTGCACTCAAACGCATTCATTC
ACGCCCATCTCTCTCCTATTTATTTCCAAGGTGCCTCAACGGCGTTTGTG
GCTTTGTCGGCTCTTGCCTCCTTCTCCTTTGTCTGGCGTGGGGCCGTGCG
TCGACGAGGGGAGGAGGCGGAACGACGCTTGA back to top
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