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Properties
| Property Name | Value |
|---|
| TranscriptId | 666745 |
| Track | FilteredModels2 |
| ProteinId | 666659 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_9 | supercontig | scaffold_9:933408..935853 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_4897 ID=mRNA_4897|Name=jgi.p|Nanoce1779_2|666659|organism=Nannochloropsis oceanica|type=mRNA|length=2104bp
ATGGGCAAGAAACGCAAGTCCATGCCCGTGACCTTTGGAGCGCCGGTCTC
CCAAAAACTCAAAACCTCCTCTACTGCTCTCCCCGCCACTACCACCAAGG
CCTCCCCCACCACATCTACCGCCTCCAACCTCGAGCGTGCCTTTGCACAG
CTCACTACAGACCCCCTTGGCCTCCTGGTGGGAGGAGAAAACACTGCCTC
GTTCCTGGAAAATCAGTGGGAGCAAGCCCCGTGCGTCTTCCGAGCCAGCC
CGGAACGCCTTGCCTACTTCCACCATCTCCTTTCCCTTTCGTCCTACCTG
CAAGCCGCCAAAAAACGCGATGAGCCGAGGAGAGTAAAATCAGCCGGTAA
AATGCCTGCTTCTCGCTCCTTTCGCCTGGGCGTGGATGTGAACGCTGCGC
GCTACGTACGTGGCCACCGAGAAACCCTCAACGAGATCAACGCCGAGCAA
GCAAAGCGAACCGATCTCACGGCGGTGCATCACAGACAAGCCACGGCGGC
CACGCTCTCCCTCCTCCACGACACCAAAGGCTGTACGCTCCAAGTACTCC
AACCCCAGCGCTGGGACGACAGATGCTGGCGGCTCGCTGCGGCGCTTGAG
GCCCAATTCGGGTGTTTGGTCGGGGTGAACGCCTACTTAACTCCGGGGGG
GACACAAGGGCTGGCACCCCATTGTGATCCTGTGGAGATATTCGTCATTC
AGACAGAAAATAAGAAGTCCTGGCGCTTGTACGAACCTCTAGAGGGCTTT
GCTCTGCCCAACCAGGCGAGCGGGGATTTGCGGCAGGACCAGATTGGGAA
GCCGTGCATGGAGGTGGTGTTGTCACCCGGAGATGTCCTCTACATGCCGC
GAGGCACGATCCACCAGGCTGTGGCAGGGGAGGGAGGGAAGGAGGGAAGA
ACTGCCGTCGCTTCCTCTCACTTGACGATTTCGACGTACCAGCAGTGGAG
CTATGGCGATTTGGCCACTCAAATGATGGAGGTGGTGGGTCACAACGTCA
CCTACAAAACCAGCCCAGCCACTTTTCCCCTTCCCATGCGTCGCTCTCCT
CTCCCCGGCTTCATATTTGAACACAGCCTTGCTCGCCCTCCCTCCCCACC
TGCCTCCGTCACGGCCCTTGCAGCGGGTTTACGCGCTCTGGCCGCGCACA
TTGAGAAAAACCCGAAGCTTGTCTCTCTAGGCACGTGGTCCTTGTGCATG
GACTTCTTGGGAGCTCGCCTTCCTCCTCACCCTGCCACCCTTCTTCCCCC
TGGCCCGATGCCTGAACGGTTGATGGACGGGATTAAACTGAGGGTGGGGA
AAGGGTGCGCGTATCTATTACCCTACACGGTGAGAGAGGTGAAGCTAGGC
ATGGAGGGAGAGGAAGGGGAAGAAGGAGAGGGAGGTGGGATGATGAAGCT
TGTGCATTGTTTGGATAACAGTAGGTGGCTGCATATGATGGGGGCGGAGG
AGGAGGAGGAAGACGGAGAAGCGGAGGAGGAGGAAGAAGAGGAGGAGGAG
GACGACGACGAGAGCGAGGATGATGAGGATGAGACCGGGGAAGAGGAGGA
GGAGGAAGCGGAGGGGTTGGTGGCCACGGTGCGGAAGAAGAAGAAAGGGG
TGGAGCGACGCATGAAGGGCGCCTTAGGGGACGTGTTGGTGGCGAGGCAC
GGAGAGGGAGGACAGCTTCCGAGTGTGGCGAAGAAGGTGAGGTATTAAAT
GGTGGGATAAAGTAGTCATCAGGAGCCGGAAAGACAAAGTCAAAGTGGTG
CCTATGTTACTTTTATTTGTTGCTGCATCAACATATATGTAGACTCATCC
ACCCGCCACGTGCTTTTTCTATTATGGTCCGCGCCGGTGAGACATGTGCA
CGTTCGGCGAAAAATACGGTGCAGAAAAGAGGATCGGTGAACGTTTTGCC
TTTAAGAGGAGAGAATTTTCTGGCACACAGAGGGATGTAAAAAATGAGAC
ACACAGAGAGGGGCAATCCAAAGGATGAATCCATCAAACGATGCGTCAGA
CATCATATGCCTTTAGTTCTTGACTATACCGCGTTTGCTTCATCCTTTTC
TTCCATCTGCTCTTCTACGGGATAAAGCAAAATATACACCAGATGAACTG
AAAT back to topprotein sequence of jgi.p|Nanoce1779_2|666659 >mRNA_4897-protein ID=mRNA_4897-protein|Name=jgi.p|Nanoce1779_2|666659|organism=Nannochloropsis oceanica|type=polypeptide|length=566bp
MGKKRKSMPVTFGAPVSQKLKTSSTALPATTTKASPTTSTASNLERAFAQ
LTTDPLGLLVGGENTASFLENQWEQAPCVFRASPERLAYFHHLLSLSSYL
QAAKKRDEPRRVKSAGKMPASRSFRLGVDVNAARYVRGHRETLNEINAEQ
AKRTDLTAVHHRQATAATLSLLHDTKGCTLQVLQPQRWDDRCWRLAAALE
AQFGCLVGVNAYLTPGGTQGLAPHCDPVEIFVIQTENKKSWRLYEPLEGF
ALPNQASGDLRQDQIGKPCMEVVLSPGDVLYMPRGTIHQAVAGEGGKEGR
TAVASSHLTISTYQQWSYGDLATQMMEVVGHNVTYKTSPATFPLPMRRSP
LPGFIFEHSLARPPSPPASVTALAAGLRALAAHIEKNPKLVSLGTWSLCM
DFLGARLPPHPATLLPPGPMPERLMDGIKLRVGKGCAYLLPYTVREVKLG
MEGEEGEEGEGGGMMKLVHCLDNSRWLHMMGAEEEEEDGEAEEEEEEEEE
DDDESEDDEDETGEEEEEEAEGLVATVRKKKKGVERRMKGALGDVLVARH
GEGGQLPSVAKKVRY* back to topmRNA from alignment at scaffold_9:933408..935853- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_4897 ID=mRNA_4897|Name=jgi.p|Nanoce1779_2|666659|organism=Nannochloropsis oceanica|type=mRNA|length=2446bp|location=Sequence derived from alignment at scaffold_9:933408..935853- (Nannochloropsis oceanica)
ATGGGCAAGAAACGCAAGTCCATGCCCGTGACCTTTGGAGCGCCGGTCTC
CCAAAAACTCAAAACCTCCTCTACTGCTCTCCCCGCCACTACCACCAAGG
CCTCCCCCACCACATCTACCGCCTCCAACCTCGAGCGTGCCTTTGCACAG
CTCACTACAGACCCCCTTGGCCTCCTGGTGGGAGGAGAAAACACTGCCTC
GTTCCTGGAAAATCAGTGGGAGCAAGCCCCGTGCGTCTTCCGAGCCAGCC
CGGAACGCCTTGCCTACTTCCACCATCTCCTTTCCCTTTCGTCCTACCTG
CAAGCCGCCAAAAAACGCGATGAGCCGAGGAGAGTAAAATCAGCCGGTAA
AATGCCTGCTTCTCGCTCCTTTCGCCTGGGCGTGGATGTGAACGCTGCGC
GCTACGTACGTGGCCACCGAGAAACCCTCAACGAGATCAACGCCGAGCAA
GCAAAGCGAACCGATCTCACGGCGGTGCATCACAGACAAGCCACGGCGGC
CACGCTCTCCCTCCTCCACGACACCAAAGGCTGTACGCTCCAAGTACTCC
AACCCCAGCGCTGGGACGACAGATGCTGGCGGCTCGCTGCGGCGCTTGAG
GCCCAATTCGGGTGTTTGGTCGGGGTGAACGCCTACTTAACTCCGGGGGG
GACACAAGGGCTGGCACCCCATTGTGATCCTGTGGAGATATTCGTCATTC
AGACAGAAAATAAGAAGTCCTGGCGCTTGTACGAACCTCTAGAGGGCTTT
GCTCTGCCCAACCAGGCGAGCGGGGATTTGCGGCAGGACCAGATTGGGAA
GCCGTGCATGGAGGTGGTGTTGTCACCCGGAGATGTCCTCTACATGCCGC
GAGGCACGATCCACCAGGCTGTGGCAGGGGAGGGAGGGAAGGAGGGAAGA
ACTGCCGTCGCTTCCTCTCACTTGACGATTTCGACGTACCAGCAGTGGAG
CTATGGCGATTTGGCCACTCAAATGATGGAGGTGGTGGGTCACAACGTCA
CCTACAAAACCAGCCCAGCCACTTTTCCCCTTCCCATGCGTCGCTCTCCT
CTCCCCGGCTTCATATTTGAACACAGCCTTGCTCGCCCTCCCTCCCCACC
TGCCTCCGTCACGGCCCTTGCAGCGGGTTTACGCGCTCTGGCCGCGCACA
TTGAGAAAAACCCGAAGCTTGTCTCTCTAGGCACGTGGTCCTTGTGCATG
GACTTCTTGGGAGCTCGCCTTCCTCCTCACCCTGCCACCCTTCTTCCCCC
TGGCCCGATGCCTGAACGGTTGATGGACGGGATTAAACTGAGGGTGGGGA
AAGGGTGCGCGTATCTATTACCCTACACGGTGAGAGAGGTGAAGCTAGGC
ATGGAGGGAGAGGAAGGGGAAGAAGGAGAGGGAGGTGGGATGATGAAGCT
TGTGCATTGTTTGGATAACAGTAGGTGGCTGCATATGATGGGGGCGGAGG
AGGAGGAGGAAGACGGAGAAGCGGAGGAGGAGGAAGAAGAGGAGGAGGAG
GACGACGACGAGAGCGAGGATGATGAGGATGAGACCGGGGAAGAGGAGGA
GGAGGAAGCGGTAATGAAGTGGAAAGGAAACGAAGAGGAAGGAAAGGAGC
ATATGCGAAGCGAGGAGGGGCAAGAGGAGGAGGAGGATGAGGGGGAGAAG
CAAGAGGAGGAGGAGGGGGGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGC
CTCTCCCGCTGTAGGGATGTCGCCGCTCGATGCCATTCCTGGGATTATCT
TCCCAGCAAAATTTAGGCTGGCCGTCTCTGCTTTGCTTGGTCATGGAGGA
GGGGGGGAAGGGGGGGAAGAGAGCAGGACGATAAAGATCAAAGATCTGCC
GGGCTTGAGCAATGACGCTGACAAAATGGAGCTGGCCGTGGCTCTGTGGC
AGGAGGGGTTGGTGGCCACGGTGCGGAAGAAGAAGAAAGGGGTGGAGCGA
CGCATGAAGGGCGCCTTAGGGGACGTGTTGGTGGCGAGGCACGGAGAGGG
AGGACAGCTTCCGAGTGTGGCGAAGAAGGTGAGGTATTAAATGGTGGGAT
AAAGTAGTCATCAGGAGCCGGAAAGACAAAGTCAAAGTGGTGCCTATGTT
ACTTTTATTTGTTGCTGCATCAACATATATGTAGACTCATCCACCCGCCA
CGTGCTTTTTCTATTATGGTCCGCGCCGGTGAGACATGTGCACGTTCGGC
GAAAAATACGGTGCAGAAAAGAGGATCGGTGAACGTTTTGCCTTTAAGAG
GAGAGAATTTTCTGGCACACAGAGGGATGTAAAAAATGAGACACACAGAG
AGGGGCAATCCAAAGGATGAATCCATCAAACGATGCGTCAGACATCATAT
GCCTTTAGTTCTTGACTATACCGCGTTTGCTTCATCCTTTTCTTCCATCT
GCTCTTCTACGGGATAAAGCAAAATATACACCAGATGAACTGAAAT back to topCoding sequence (CDS) from alignment at scaffold_9:933408..935853- >mRNA_4897 ID=mRNA_4897|Name=jgi.p|Nanoce1779_2|666659|organism=Nannochloropsis oceanica|type=CDS|length=3396bp|location=Sequence derived from alignment at scaffold_9:933408..935853- (Nannochloropsis oceanica)
GAGGGGTTGGTGGCCACGGTGCGGAAGAAGAAGAAAGGGGTGGAGCGACG
CATGAAGGGCGCCTTAGGGGACGTGTTGGTGGCGAGGCACGGAGAGGGAG
GACAGCTTCCGAGTGTGGCGAAGAAGGTGAGGTATTAAATGGGCAAGAAA
CGCAAGTCCATGCCCGTGACCTTTGGAGCGCCGGTCTCCCAAAAACTCAA
AACCTCCTCTACTGCTCTCCCCGCCACTACCACCAAGGCCTCCCCCACCA
CATCTACCGCCTCCAACCTCGAGCGTGCCTTTGCACAGCTCACTACAGAC
CCCCTTGGCCTCCTGGTGGGAGGAGAAAACACTGCCTCGTTCCTGGAAAA
TCAGTGGGAGCAAGCCCCGTGCGTCTTCCGAGCCAGCCCGGAACGCCTTG
CCTACTTCCACCATCTCCTTTCCCTTTCGTCCTACCTGCAAGCCGCCAAA
AAACGCGATGAGCCGAGGAGAGTAAAATCAGCCGGTAAAATGCCTGCTTC
TCGCTCCTTTCGCCTGGGCGTGGATGTGAACGCTGCGCGCTACGTACGTG
GCCACCGAGAAACCCTCAACGAGATCAACGCCGAGCAAGCAAAGCGAACC
GATCTCACGGCGGTGCATCACAGACAAGCCACGGCGGCCACGCTCTCCCT
CCTCCACGACACCAAAGGCTGTACGCTCCAAGTACTCCAACCCCAGCGCT
GGGACGACAGATGCTGGCGGCTCGCTGCGGCGCTTGAGGCCCAATTCGGG
TGTTTGGTCGGGGTGAACGCCTACTTAACTCCGGGGGGGACACAAGGGCT
GGCACCCCATTGTGATCCTGTGGAGATATTCGTCATTCAGACAGAAAATA
AGAAGTCCTGGCGCTTGTACGAACCTCTAGAGGGCTTTGCTCTGCCCAAC
CAGGCGAGCGGGGATTTGCGGCAGGACCAGATTGGGAAGCCGTGCATGGA
GGTGGTGTTGTCACCCGGAGATGTCCTCTACATGCCGCGAGGCACGATCC
ACCAGGCTGTGGCAGGGGAGGGAGGGAAGGAGGGAAGAACTGCCGTCGCT
TCCTCTCACTTGACGATTTCGACGTACCAGCAGTGGAGCTATGGCGATTT
GGCCACTCAAATGATGGAGGTGGTGGGTCACAACGTCACCTACAAAACCA
GCCCAGCCACTTTTCCCCTTCCCATGCGTCGCTCTCCTCTCCCCGGCTTC
ATATTTGAACACAGCCTTGCTCGCCCTCCCTCCCCACCTGCCTCCGTCAC
GGCCCTTGCAGCGGGTTTACGCGCTCTGGCCGCGCACATTGAGAAAAACC
CGAAGCTTGTCTCTCTAGGCACGTGGTCCTTGTGCATGGACTTCTTGGGA
GCTCGCCTTCCTCCTCACCCTGCCACCCTTCTTCCCCCTGGCCCGATGCC
TGAACGGTTGATGGACGGGATTAAACTGAGGGTGGGGAAAGGGTGCGCGT
ATCTATTACCCTACACGGTGAGAGAGGTGAAGCTAGGCATGGAGGGAGAG
GAAGGGGAAGAAGGAGAGGGAGGTGGGATGATGAAGCTTGTGCATTGTTT
GGATAACAGTAGGTGGCTGCATATGATGGGGGCGGAGGAGGAGGAGGAAG
ACGGAGAAGCGGAGGAGGAGGAAGAAGAGGAGGAGGAGGACGACGACGAG
AGCGAGGATGATGAGGATGAGACCGGGGAAGAGGAGGAGGAGGAAGCGGA
GGGGTTGGTGGCCACGGTGCGGAAGAAGAAGAAAGGGGTGGAGCGACGCA
TGAAGGGCGCCTTAGGGGACGTGTTGGTGGCGAGGCACGGAGAGGGAGGA
CAGCTTCCGAGTGTGGCGAAGAAGGTGAGGTATTAAATGGGCAAGAAACG
CAAGTCCATGCCCGTGACCTTTGGAGCGCCGGTCTCCCAAAAACTCAAAA
CCTCCTCTACTGCTCTCCCCGCCACTACCACCAAGGCCTCCCCCACCACA
TCTACCGCCTCCAACCTCGAGCGTGCCTTTGCACAGCTCACTACAGACCC
CCTTGGCCTCCTGGTGGGAGGAGAAAACACTGCCTCGTTCCTGGAAAATC
AGTGGGAGCAAGCCCCGTGCGTCTTCCGAGCCAGCCCGGAACGCCTTGCC
TACTTCCACCATCTCCTTTCCCTTTCGTCCTACCTGCAAGCCGCCAAAAA
ACGCGATGAGCCGAGGAGAGTAAAATCAGCCGGTAAAATGCCTGCTTCTC
GCTCCTTTCGCCTGGGCGTGGATGTGAACGCTGCGCGCTACGTACGTGGC
CACCGAGAAACCCTCAACGAGATCAACGCCGAGCAAGCAAAGCGAACCGA
TCTCACGGCGGTGCATCACAGACAAGCCACGGCGGCCACGCTCTCCCTCC
TCCACGACACCAAAGGCTGTACGCTCCAAGTACTCCAACCCCAGCGCTGG
GACGACAGATGCTGGCGGCTCGCTGCGGCGCTTGAGGCCCAATTCGGGTG
TTTGGTCGGGGTGAACGCCTACTTAACTCCGGGGGGGACACAAGGGCTGG
CACCCCATTGTGATCCTGTGGAGATATTCGTCATTCAGACAGAAAATAAG
AAGTCCTGGCGCTTGTACGAACCTCTAGAGGGCTTTGCTCTGCCCAACCA
GGCGAGCGGGGATTTGCGGCAGGACCAGATTGGGAAGCCGTGCATGGAGG
TGGTGTTGTCACCCGGAGATGTCCTCTACATGCCGCGAGGCACGATCCAC
CAGGCTGTGGCAGGGGAGGGAGGGAAGGAGGGAAGAACTGCCGTCGCTTC
CTCTCACTTGACGATTTCGACGTACCAGCAGTGGAGCTATGGCGATTTGG
CCACTCAAATGATGGAGGTGGTGGGTCACAACGTCACCTACAAAACCAGC
CCAGCCACTTTTCCCCTTCCCATGCGTCGCTCTCCTCTCCCCGGCTTCAT
ATTTGAACACAGCCTTGCTCGCCCTCCCTCCCCACCTGCCTCCGTCACGG
CCCTTGCAGCGGGTTTACGCGCTCTGGCCGCGCACATTGAGAAAAACCCG
AAGCTTGTCTCTCTAGGCACGTGGTCCTTGTGCATGGACTTCTTGGGAGC
TCGCCTTCCTCCTCACCCTGCCACCCTTCTTCCCCCTGGCCCGATGCCTG
AACGGTTGATGGACGGGATTAAACTGAGGGTGGGGAAAGGGTGCGCGTAT
CTATTACCCTACACGGTGAGAGAGGTGAAGCTAGGCATGGAGGGAGAGGA
AGGGGAAGAAGGAGAGGGAGGTGGGATGATGAAGCTTGTGCATTGTTTGG
ATAACAGTAGGTGGCTGCATATGATGGGGGCGGAGGAGGAGGAGGAAGAC
GGAGAAGCGGAGGAGGAGGAAGAAGAGGAGGAGGAGGACGACGACGAGAG
CGAGGATGATGAGGATGAGACCGGGGAAGAGGAGGAGGAGGAAGCG back to top
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