|
|
Properties
| Property Name | Value |
|---|
| TranscriptId | 588361 |
| Track | FilteredModels2 |
| ProteinId | 588275 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_9 | supercontig | scaffold_9:921160..922417 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_4892 ID=mRNA_4892|Name=jgi.p|Nanoce1779_2|588275|organism=Nannochloropsis oceanica|type=mRNA|length=741bp
AGCGAGAGAAATGGCCTCCCGGTCTCTCTTTTTCCTGGCGGCGGCCGTGG
TGCTCTGCCTGGCCAATGCCTTCATGCTCCCCTCCCCCCTCCCTCTGCGC
GCCGGGTCGTCTGCCCGCGTGCTTTCGACCGAGGACATGTCGTTCGACTT
TGGCGGGCGAGCAAAGGGTGGCATGGAGATGATGCGACACGGCAAGCGTT
TCAAGAAGTTGGGCTTGCCCGCTGACCAGCGTAAGGCGTTGCTCCGAGCG
TTAACCACTGAGGCCATCCGCCACGGACGCATCAAGACGACGCTTATCCG
GGCCAAGGCCGTGCGTAAATACGTTGATAAGATGATCGGCTTAAGCAAGC
GAGGAGACCTTCACGCCCGCCGACAGGCCCTGGGGTGGATGTACGACAAA
GACCTAGTCGCTGCTTTATTTGAGCAGGCGCAAGATCGTTACGGGGAGCG
TGCCGGTGGCTACTGTCGTGTCCTCCGCACCCTGCCCCGCAAGGGAGACA
ACGCCCCCATGGCCATCTTGGAGCTTGTCTAAGTGGGAAAGGAGGACGAG
GACGAAGTCGACGAGAAGTGGGAAGTGGAATGGTGGGGTGGGGCGGTGGT
ATATATACAGGGAAGTGGAAGGAAATGCGCATGGAGAGGGCGTGTGGATG
GGTGGGTGGAGGGAGCGAGGGAGGGATGGAGGGAGAAGGAGAGAAGGAGG
GGAAGGTATTGATCTGCCTGTCTTTTTCACAGCGGTGAGGC back to topprotein sequence of jgi.p|Nanoce1779_2|588275 >mRNA_4892-protein ID=mRNA_4892-protein|Name=jgi.p|Nanoce1779_2|588275|organism=Nannochloropsis oceanica|type=polypeptide|length=174bp
MASRSLFFLAAAVVLCLANAFMLPSPLPLRAGSSARVLSTEDMSFDFGGR
AKGGMEMMRHGKRFKKLGLPADQRKALLRALTTEAIRHGRIKTTLIRAKA
VRKYVDKMIGLSKRGDLHARRQALGWMYDKDLVAALFEQAQDRYGERAGG
YCRVLRTLPRKGDNAPMAILELV* back to topmRNA from alignment at scaffold_9:921160..922417- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_4892 ID=mRNA_4892|Name=jgi.p|Nanoce1779_2|588275|organism=Nannochloropsis oceanica|type=mRNA|length=1258bp|location=Sequence derived from alignment at scaffold_9:921160..922417- (Nannochloropsis oceanica)
AGCGAGAGAAATGGCCTCCCGGTCTCTCTTTTTCCTGGCGGCGGCCGTGG
TGCTCTGCCTGGCCAATGCCTTCATGCTCCCCTCCCCCCTCCCTCTGCGC
GCCGGGTCGTCTGCCCGCGTGCTTTCGACCGAGGACATGTCGTTCGACTT
TGGCGGGCGAGCAAAGGGTGGCATGGAGATGATGCGACACGGCAAGCGTT
TCAAGAAGTTGGGCTTGCCCGCTGACCAGCGTAAGGCGTTGCTCCGAGCG
TTAACCACTGAGGGTAAGTCGAGAGGAAGCAGAGAGATGGAGGGAGAGAG
AGAGGGAGGGAATGAAAAATAAGTTGAATGATGCCCTCGGGGTATTGCTT
CGGGGGATATGGAGCGTATTGAAATGAAAAGAGGGGGAAGAGAATGCAAC
ATTGACAAGCGGAGCTTTGGACGAGATGACTGAGCGTGGACGAGTGAGGT
TAGGGTTGTGGAGAAAACATGAAAGTAAGCCGCAAGGTGAATATGACGTA
CCACAGACCAGCTCACCCGCCCACCCTGCTCCTCCTCACTCACCTCCCTC
CCCTTCTCCTCCCAGCCATCCGCCACGGACGCATCAAGACGACGCTTATC
CGGGCCAAGGCCGTGCGTAAATACGTTGATAAGATGATCGGCTTAAGCAA
GCGAGGAGACCTTCACGCCCGCCGACAGGCCCTGGGGTGGATGTACGACA
AAGACCTAGTCGCTGCTTTATTTGAGCAGGTAGGCGTGGGTGTGGGTGTG
TGAAACGGGTGTCGGGGAGCTGCTGTGGGCAGTCTTTCGCGTGGGATCCT
CTCTTTCCTCCCCGCCCTTGCAGGCGTCTTCTCTCTCCTTGTTTCCTGAT
GGCTTTGAGTCCTCACGGGTACCTCTCCCGCTTCTCCCTCTCACATCTCC
ATCGCTCCTTCCTCCCTCGCTATCTGTTTCTCTTCCTCTCCCAGGCGCAA
GATCGTTACGGGGAGCGTGCCGGTGGCTACTGTCGTGTCCTCCGCACCCT
GCCCCGCAAGGGAGACAACGCCCCCATGGCCATCTTGGAGCTTGTCTAAG
TGGGAAAGGAGGACGAGGACGAAGTCGACGAGAAGTGGGAAGTGGAATGG
TGGGGTGGGGCGGTGGTATATATACAGGGAAGTGGAAGGAAATGCGCATG
GAGAGGGCGTGTGGATGGGTGGGTGGAGGGAGCGAGGGAGGGATGGAGGG
AGAAGGAGAGAAGGAGGGGAAGGTATTGATCTGCCTGTCTTTTTCACAGC
GGTGAGGC back to topCoding sequence (CDS) from alignment at scaffold_9:921160..922417- >mRNA_4892 ID=mRNA_4892|Name=jgi.p|Nanoce1779_2|588275|organism=Nannochloropsis oceanica|type=CDS|length=1566bp|location=Sequence derived from alignment at scaffold_9:921160..922417- (Nannochloropsis oceanica)
GCGCAAGATCGTTACGGGGAGCGTGCCGGTGGCTACTGTCGTGTCCTCCG
CACCCTGCCCCGCAAGGGAGACAACGCCCCCATGGCCATCTTGGAGCTTG
TCTAACCATCCGCCACGGACGCATCAAGACGACGCTTATCCGGGCCAAGG
CCGTGCGTAAATACGTTGATAAGATGATCGGCTTAAGCAAGCGAGGAGAC
CTTCACGCCCGCCGACAGGCCCTGGGGTGGATGTACGACAAAGACCTAGT
CGCTGCTTTATTTGAGCAGATGGCCTCCCGGTCTCTCTTTTTCCTGGCGG
CGGCCGTGGTGCTCTGCCTGGCCAATGCCTTCATGCTCCCCTCCCCCCTC
CCTCTGCGCGCCGGGTCGTCTGCCCGCGTGCTTTCGACCGAGGACATGTC
GTTCGACTTTGGCGGGCGAGCAAAGGGTGGCATGGAGATGATGCGACACG
GCAAGCGTTTCAAGAAGTTGGGCTTGCCCGCTGACCAGCGTAAGGCGTTG
CTCCGAGCGTTAACCACTGAGGGCGCAAGATCGTTACGGGGAGCGTGCCG
GTGGCTACTGTCGTGTCCTCCGCACCCTGCCCCGCAAGGGAGACAACGCC
CCCATGGCCATCTTGGAGCTTGTCTAACCATCCGCCACGGACGCATCAAG
ACGACGCTTATCCGGGCCAAGGCCGTGCGTAAATACGTTGATAAGATGAT
CGGCTTAAGCAAGCGAGGAGACCTTCACGCCCGCCGACAGGCCCTGGGGT
GGATGTACGACAAAGACCTAGTCGCTGCTTTATTTGAGCAGATGGCCTCC
CGGTCTCTCTTTTTCCTGGCGGCGGCCGTGGTGCTCTGCCTGGCCAATGC
CTTCATGCTCCCCTCCCCCCTCCCTCTGCGCGCCGGGTCGTCTGCCCGCG
TGCTTTCGACCGAGGACATGTCGTTCGACTTTGGCGGGCGAGCAAAGGGT
GGCATGGAGATGATGCGACACGGCAAGCGTTTCAAGAAGTTGGGCTTGCC
CGCTGACCAGCGTAAGGCGTTGCTCCGAGCGTTAACCACTGAGGGCGCAA
GATCGTTACGGGGAGCGTGCCGGTGGCTACTGTCGTGTCCTCCGCACCCT
GCCCCGCAAGGGAGACAACGCCCCCATGGCCATCTTGGAGCTTGTCTAAC
CATCCGCCACGGACGCATCAAGACGACGCTTATCCGGGCCAAGGCCGTGC
GTAAATACGTTGATAAGATGATCGGCTTAAGCAAGCGAGGAGACCTTCAC
GCCCGCCGACAGGCCCTGGGGTGGATGTACGACAAAGACCTAGTCGCTGC
TTTATTTGAGCAGATGGCCTCCCGGTCTCTCTTTTTCCTGGCGGCGGCCG
TGGTGCTCTGCCTGGCCAATGCCTTCATGCTCCCCTCCCCCCTCCCTCTG
CGCGCCGGGTCGTCTGCCCGCGTGCTTTCGACCGAGGACATGTCGTTCGA
CTTTGGCGGGCGAGCAAAGGGTGGCATGGAGATGATGCGACACGGCAAGC
GTTTCAAGAAGTTGGGCTTGCCCGCTGACCAGCGTAAGGCGTTGCTCCGA
GCGTTAACCACTGAGG back to top
|