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Properties
| Property Name | Value |
|---|
| TranscriptId | 527479 |
| Track | FilteredModels2 |
| ProteinId | 527393 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_9 | supercontig | scaffold_9:827516..828460 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_4869 ID=mRNA_4869|Name=jgi.p|Nanoce1779_2|527393|organism=Nannochloropsis oceanica|type=mRNA|length=873bp
ATGCGGGAACGTGCGTCGCTTCTCGTCTTGGCCTCCACCTCTCAGCAAGA
CCAAGAGAGCCATCTCATTGAGGTCTCTCCTTCCCTGCGCTTGCACGTCA
CCCTGGCCAAGGACTCGGGCCCCAACGGTAGCCTTTTTGCCTATTCTGTT
TGGAATGGCAGTGTCATGCTGGCTCGGTATCTGGACTCTAACCCTACTCT
GGTCCAGGGAAAGCGTGTCATTGAGTTCGGCGCGGCTGGTGCCTTGCCCT
CTTTGATCGCGTTGGTGCACGAGTGTGAGTTTGCCATGATTACAGACTAC
CCAGATCAAAGACTGCTGGACGCCATTCGTACGAGTTTGAAGGATGTGAG
GAACGAGCCGTGGTTGGGGCTGGGACGGGAAGAGGGGGGAGGTGAAGGGG
AGAGCAGGGTGGGGGTGCAAAGTCATTTGTGGGGGAGTGACTGTGGAAGA
TTGATGAGGGCTGCAGACAGAGAGGGCGAAAGTACGGAGGGCGAAGAAGC
TGCTGCTGTTACTGCTGTTCCTGTTGCGTATGACGTTGCCCTAGTAGGCG
AGTGTCTCTGGCTTCACGATCAACACTCGAATCTCCTTTGCTCCCTCTTT
CAAACGCTACGTCCAGGAGGGATCGCATTGGTATGTTTTGCGCATCATGT
GCCTGGGTGTGAAGAGAGGGACTTAAGGTTCTTTACCTTGGCGACCCAGA
GGCAGAGGTATGGAGGACGAGGGGAGGAGGAGGAGGGGTGGTTTGTGGTG
ACAAAGATAGGGGAGGAGAGGATGGGATATATGCATAGAGAGGGGACGAT
GGTGACGCAGTTCTTATACGAGTTGGAGAAGAGAGTAGGGGAAAAAGGGA
AGGTGGAGGAGGAGAGTAGATAG back to topprotein sequence of jgi.p|Nanoce1779_2|527393 >mRNA_4869-protein ID=mRNA_4869-protein|Name=jgi.p|Nanoce1779_2|527393|organism=Nannochloropsis oceanica|type=polypeptide|length=291bp
MRERASLLVLASTSQQDQESHLIEVSPSLRLHVTLAKDSGPNGSLFAYSV
WNGSVMLARYLDSNPTLVQGKRVIEFGAAGALPSLIALVHECEFAMITDY
PDQRLLDAIRTSLKDVRNEPWLGLGREEGGGEGESRVGVQSHLWGSDCGR
LMRAADREGESTEGEEAAAVTAVPVAYDVALVGECLWLHDQHSNLLCSLF
QTLRPGGIALVCFAHHVPGCEERDLRFFTLATQRQRYGGRGEEEEGWFVV
TKIGEERMGYMHREGTMVTQFLYELEKRVGEKGKVEEESR* back to topmRNA from alignment at scaffold_9:827516..828460- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_4869 ID=mRNA_4869|Name=jgi.p|Nanoce1779_2|527393|organism=Nannochloropsis oceanica|type=mRNA|length=945bp|location=Sequence derived from alignment at scaffold_9:827516..828460- (Nannochloropsis oceanica)
ATGCGGGAACGTGCGTCGCTTCTCGTCTTGGCCTCCACCTCTCAGCAAGA
CCAAGAGAGCCATCTCATTGAGGTCTCTCCTTCCCTGCGCTTGCACGTCA
CCCTGGCCAAGGACTCGGGCCCCAACGGTAGCCTTTTTGCCTATTCTGTT
TGGAATGGCAGTGTCATGCTGGCTCGGTATCTGGACTCTAACCCTACTCT
GGTCCAGGGAAAGCGTGTCATTGAGTTCGGCGCGGCTGGTGCCTTGCCCT
CTTTGATCGCGTTGGTGCACGAGTGTGAGTTTGCCATGATTACAGACTAC
CCAGATCAAAGACTGCTGGACGCCATTCGTACGAGTTTGAAGGATGTGAG
GAACGAGCCGTGGTTGGGGCTGGGACGGGAAGAGGGGGGAGGTGAAGGGG
AGAGCAGGGTGGGGGTGCAAAGTCATTTGTGGGGGAGTGACTGTGGAAGA
TTGATGAGGGCTGGTGGTGATCGATCGCATGTGGATAAAGGAGAAGGAAA
GAGGAGAAAAAGAAATCAAGATGAAGCAGACAAAGCAGACAGAGAGGGCG
AAAGTACGGAGGGCGAAGAAGCTGCTGCTGTTACTGCTGTTCCTGTTGCG
TATGACGTTGCCCTAGTAGGCGAGTGTCTCTGGCTTCACGATCAACACTC
GAATCTCCTTTGCTCCCTCTTTCAAACGCTACGTCCAGGAGGGATCGCAT
TGGTATGTTTTGCGCATCATGTGCCTGGGTGTGAAGAGAGGGACTTAAGG
TTCTTTACCTTGGCGACCCAGAGGCAGAGGTATGGAGGACGAGGGGAGGA
GGAGGAGGGGTGGTTTGTGGTGACAAAGATAGGGGAGGAGAGGATGGGAT
ATATGCATAGAGAGGGGACGATGGTGACGCAGTTCTTATACGAGTTGGAG
AAGAGAGTAGGGGAAAAAGGGAAGGTGGAGGAGGAGAGTAGATAG back to topCoding sequence (CDS) from alignment at scaffold_9:827516..828460- >mRNA_4869 ID=mRNA_4869|Name=jgi.p|Nanoce1779_2|527393|organism=Nannochloropsis oceanica|type=CDS|length=1746bp|location=Sequence derived from alignment at scaffold_9:827516..828460- (Nannochloropsis oceanica)
CAGACAGAGAGGGCGAAAGTACGGAGGGCGAAGAAGCTGCTGCTGTTACT
GCTGTTCCTGTTGCGTATGACGTTGCCCTAGTAGGCGAGTGTCTCTGGCT
TCACGATCAACACTCGAATCTCCTTTGCTCCCTCTTTCAAACGCTACGTC
CAGGAGGGATCGCATTGGTATGTTTTGCGCATCATGTGCCTGGGTGTGAA
GAGAGGGACTTAAGGTTCTTTACCTTGGCGACCCAGAGGCAGAGGTATGG
AGGACGAGGGGAGGAGGAGGAGGGGTGGTTTGTGGTGACAAAGATAGGGG
AGGAGAGGATGGGATATATGCATAGAGAGGGGACGATGGTGACGCAGTTC
TTATACGAGTTGGAGAAGAGAGTAGGGGAAAAAGGGAAGGTGGAGGAGGA
GAGTAGATAGATGCGGGAACGTGCGTCGCTTCTCGTCTTGGCCTCCACCT
CTCAGCAAGACCAAGAGAGCCATCTCATTGAGGTCTCTCCTTCCCTGCGC
TTGCACGTCACCCTGGCCAAGGACTCGGGCCCCAACGGTAGCCTTTTTGC
CTATTCTGTTTGGAATGGCAGTGTCATGCTGGCTCGGTATCTGGACTCTA
ACCCTACTCTGGTCCAGGGAAAGCGTGTCATTGAGTTCGGCGCGGCTGGT
GCCTTGCCCTCTTTGATCGCGTTGGTGCACGAGTGTGAGTTTGCCATGAT
TACAGACTACCCAGATCAAAGACTGCTGGACGCCATTCGTACGAGTTTGA
AGGATGTGAGGAACGAGCCGTGGTTGGGGCTGGGACGGGAAGAGGGGGGA
GGTGAAGGGGAGAGCAGGGTGGGGGTGCAAAGTCATTTGTGGGGGAGTGA
CTGTGGAAGATTGATGAGGGCTGCAGACAGAGAGGGCGAAAGTACGGAGG
GCGAAGAAGCTGCTGCTGTTACTGCTGTTCCTGTTGCGTATGACGTTGCC
CTAGTAGGCGAGTGTCTCTGGCTTCACGATCAACACTCGAATCTCCTTTG
CTCCCTCTTTCAAACGCTACGTCCAGGAGGGATCGCATTGGTATGTTTTG
CGCATCATGTGCCTGGGTGTGAAGAGAGGGACTTAAGGTTCTTTACCTTG
GCGACCCAGAGGCAGAGGTATGGAGGACGAGGGGAGGAGGAGGAGGGGTG
GTTTGTGGTGACAAAGATAGGGGAGGAGAGGATGGGATATATGCATAGAG
AGGGGACGATGGTGACGCAGTTCTTATACGAGTTGGAGAAGAGAGTAGGG
GAAAAAGGGAAGGTGGAGGAGGAGAGTAGATAGATGCGGGAACGTGCGTC
GCTTCTCGTCTTGGCCTCCACCTCTCAGCAAGACCAAGAGAGCCATCTCA
TTGAGGTCTCTCCTTCCCTGCGCTTGCACGTCACCCTGGCCAAGGACTCG
GGCCCCAACGGTAGCCTTTTTGCCTATTCTGTTTGGAATGGCAGTGTCAT
GCTGGCTCGGTATCTGGACTCTAACCCTACTCTGGTCCAGGGAAAGCGTG
TCATTGAGTTCGGCGCGGCTGGTGCCTTGCCCTCTTTGATCGCGTTGGTG
CACGAGTGTGAGTTTGCCATGATTACAGACTACCCAGATCAAAGACTGCT
GGACGCCATTCGTACGAGTTTGAAGGATGTGAGGAACGAGCCGTGGTTGG
GGCTGGGACGGGAAGAGGGGGGAGGTGAAGGGGAGAGCAGGGTGGGGGTG
CAAAGTCATTTGTGGGGGAGTGACTGTGGAAGATTGATGAGGGCTG back to top
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