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Properties
| Property Name | Value |
| TranscriptId | 444854 |
| Track | FilteredModels2 |
| ProteinId | 444768 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| scaffold_9 | supercontig | scaffold_9:778409..781557 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_4852 ID=mRNA_4852|Name=jgi.p|Nanoce1779_2|444768|organism=Nannochloropsis oceanica|type=mRNA|length=3149bp GTGCTTCTTTCTTTCTTTGTTTTGCATGCCCGACCATTGAGTCCAAGGCT CCAGCGTTTCAAAAATGTGCCGTCCCTTATGTACGTATACCTATTCTTCT ATGCAGGGTCTGCTTACCGTGGAGACGGCGTGCCCATCGATTGGATGCTT CGTTAGCCCCCAACCCGGTATCATCGTCAACGACCAGCAGGAGCAGCAAC GAACAAAGCACGAGCCCCACCGAAACCCTTGCATACGACCATGCCCACCC CGGCTATTGAGGGCCTCCTGGTCTCTCTTGCCCAGTGCCTGTATGATTAT CCTTCGGCTCACTACCACCACTGCCAGCACGAGGAAGCGGAGAGTAGTGA AAAGTGGGGAAGCGGTGCAGTCCGACGGCACTTGCGGGAACTCGACGAGG AGGCGGTCGATGCGCTTGTCCACGCATTGGAAGAGCACATTGTGATGGAA GCACTACCACGGCAGCAATATCAGTACCAGCATCAGCAGGGAGAGCGACC ACCACCAGACCAGCAGCACCACCACCATCACCAAAGCCAATACGAAACCC ACCAGCAGCAGCAAGGCGAGGATGAAGGGGAGCTCCTGAAAGCAAGCGAT ATCCTCCAAGTTCTTCTATCGTGGCGTAGAACCGGCGTGAAGGCTATCAA AAGCTGCATACAGATGATCAGGGATGGTCAATTAAAAGGGAGGCAGGCCG TGTGGTGTGTGTCGGAGATCAGGCAGGCATTGACGACGGGGGAAGGGCTG GCGGTCTTGACGCATTACTCTCATGAAGAAGAAGACGAGGAGGGGTTGGG CGAGAAACAAGAGAACGAGGAAGAAGGAGAAGAAGTATGGGAAAATGGAA ATGGCAAGGGAAAAGCGAAGAAGAGGAGAACTCCTACCAGCGGAGGGGGC AGCAACAGCACTAGCAGCACCAGCAGGAAGAGGAGGCGTCCCTCCACCAA TAATAATAGCTATCTGTCATCCCCCTTATACATTCATCGAAGACCAAGCG ATATCCAGCTTCGAGCATACGAAGAGTCATTGAGAGAGTTGAGAGGTCTC CTCTTCTCTACCCTTGCCCTCCTCACTTCCCCCTCCTCATCCCCTTCCTC CTCCACTTCCTCCTCCACTTCCACCTCACTCCTCATGACTGACTGGGATG CGGTTCGTCTGCAGAATTTCCTTCTTGTCCTCGACATCTTTTGGCCCCTC CTCGTCCTCGCTCAACGCCTCGAAGATGAACTCAGCCTGTGGACCGCCAA GAAGCAGCAGCAGCGACAGCAGCAGCAGCAACGACAGCGGCAGCAACATG GACAAAGACCTCCGCAGCAGCAGGAGGGAGCGGAGGAAGGGCAGAAGGAG GAAGAGTTCGTGTGGGTTCGGCCTGCACGGAGTACAGGGGAGGAGGTGGG GTTGGCGGTGCTGGGGGCAGCTTGGCCCCTCCCCCTCACCCTCCCTCTGT TCAACCTGTGCAGGGATATGCATGAGTTTTTCGTCGAGGAGGAGGAGGAA GAGGAGGAGAAGGAGGGAAGGAGTGATGGAAAAGTAGCATCGTGCTCGTG GGGTAGAGTACGGGCGAAAATTAGAGTGAATACACGAGGGGAGGAGGAAG GGGAGGGAGGGGAGGAAGGGAGGGAGGGAGGGAAGAAGGGGCGGAAGCAA CGGCAGGAGCTATTGAGTAATGACGGACCCGGCTTAATGCGCCAGTGCTT GGTATTGGCGGAAGCGTACGAGAAGGAGGATGGGAGGGAGGGCGGAGGGA AAGGCAACCCTTGGATTGGGCTGTTCAGGGAGCTGTACCACCATGTGCCG TGTGAGGCGATAGCGACCACAGAGCTGGTCGTCGAGCAGTGCATTAAGCA GGCCTTGCCGTGCGTGGATTTGTTGGTGAGGGATCTGGAAGGACGACTTC TTGCCTCGGTCCCTTTCTCCCACTTATCCTCCCCCTCAACCTCCTCCTCC TCCTCGAGGAAGGCTGCACCAGCCCTAGGGTGGCAGGACCTCGCTCTCCT CCTCCTCCTCCAAAGGTCAGTCTCGGGCTGGGCGTCGCTGTCGTCCGTGC TGCTTGGAATGGGTAGAGGAGGGGGAAGAGGAGGAGGACGAGGAGGAAGC GGAGGAGGAGGAGGAGGAGTTCTCTGCTCACAGCAGCGCATGAATCACGT TCTCCTCCGACTCCTAACTCATCTCAGTGAAGACGCCCGCATTCTCCTCC CCCCTCCTCCTTCCTCCTCCTCCTCCTCCTCCTCCTCTGTCTGGGATCCA CCCATCAAAAAGAACCTTTCCTCTCTCCTCTCCTCCTCCTCGCCCTCCTC CCCCTCCTCCTCCTTCCTCCGTCGCGCCTCCCTCCTCTTCACCCATGTCG TCACTCATAACTACTCCCCTCGACGCTTCCTCGGCCGCCTTCCCCTTCAA CGTTCTTCCCAGCTCTTCGCCCTTTTCTTTGCCTGGCTCCAAGAGGTCCA TCCTACCTCTGCCTCCCTCCCTCCCTCCCTCCTTCGTGATCTGGCAATAG AGGGCATAAGCGTAGTGTATGGAGAGGTGCCGGAAGGACAGGCACGCATT CTCTCCTCCCTCCTTGGGGCCATCGTCGAACACGCCCAAAACGCCCGCCC TCCGCAACAGCACGAGCAGCTCCAACCGCATCAGCAGCACCCGCAGCAGC ATCTGTCGCCGTTGCGGGCCCGGCCTTCTTCTTGGTCTTCATCCAAGCCC CTTTCCCTCCTCGTCGCCGCGCTGCATACGCTCACCACCTCCCATCCCAC CACCCTCCGTCCTCACACGCAGCCCTTTCAACAACTCCTCTCCCAGCTCC CTTCCCTCCCTCCCTCCCTCACCTCCTCCCTCCTCCACGCCACCCTCCCA CTCGCCTGTGCCTGCCCCTCCTTCCTCGATGCCCTCCTGGCCGCCATCCG GAAAAGCATCGTCCAAAATGATGTGTCTGGACGACTATTCGGCATGAGTG CCCTAACCTCCCTCCTCGGGCAATACCGCGGCCTGCTGGCCCTCCCTGAG CGGTGTGAGGAAGTGGCTTCCATGTTCGATCGGCTCCTCGCCCTCGCCCT CCCCCTCGCCCTCAAGAGTAAGCTGTACCGGTCCATCACCGACGCGATGA GGGAGGAAGGGAGGGGGGAAGGGAGGGAGGGAGGGTTGATGAATCTGTC back to topprotein sequence of jgi.p|Nanoce1779_2|444768 >mRNA_4852-protein ID=mRNA_4852-protein|Name=jgi.p|Nanoce1779_2|444768|organism=Nannochloropsis oceanica|type=polypeptide|length=969bp MPTPAIEGLLVSLAQCLYDYPSAHYHHCQHEEAESSEKWGSGAVRRHLRE LDEEAVDALVHALEEHIVMEALPRQQYQYQHQQGERPPPDQQHHHHHQSQ YETHQQQQGEDEGELLKASDILQVLLSWRRTGVKAIKSCIQMIRDGQLKG RQAVWCVSEIRQALTTGEGLAVLTHYSHEEEDEEGLGEKQENEEEGEEVW ENGNGKGKAKKRRTPTSGGGSNSTSSTSRKRRRPSTNNNSYLSSPLYIHR RPSDIQLRAYEESLRELRGLLFSTLALLTSPSSSPSSSTSSSTSTSLLMT DWDAVRLQNFLLVLDIFWPLLVLAQRLEDELSLWTAKKQQQRQQQQQRQR QQHGQRPPQQQEGAEEGQKEEEFVWVRPARSTGEEVGLAVLGAAWPLPLT LPLFNLCRDMHEFFVEEEEEEEEKEGRSDGKVASCSWGRVRAKIRVNTRG EEEGEGGEEGREGGKKGRKQRQELLSNDGPGLMRQCLVLAEAYEKEDGRE GGGKGNPWIGLFRELYHHVPCEAIATTELVVEQCIKQALPCVDLLVRDLE GRLLASVPFSHLSSPSTSSSSSRKAAPALGWQDLALLLLLQRSVSGWASL SSVLLGMGRGGGRGGGRGGSGGGGGGVLCSQQRMNHVLLRLLTHLSEDAR ILLPPPPSSSSSSSSSVWDPPIKKNLSSLLSSSSPSSPSSSFLRRASLLF THVVTHNYSPRRFLGRLPLQRSSQLFALFFAWLQEVHPTSASLPPSLLRD LAIEGISVVYGEVPEGQARILSSLLGAIVEHAQNARPPQQHEQLQPHQQH PQQHLSPLRARPSSWSSSKPLSLLVAALHTLTTSHPTTLRPHTQPFQQLL SQLPSLPPSLTSSLLHATLPLACACPSFLDALLAAIRKSIVQNDVSGRLF GMSALTSLLGQYRGLLALPERCEEVASMFDRLLALALPLALKSKLYRSIT DAMREEGRGEGREGGLMNL back to topmRNA from alignment at scaffold_9:778409..781557+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_4852 ID=mRNA_4852|Name=jgi.p|Nanoce1779_2|444768|organism=Nannochloropsis oceanica|type=mRNA|length=3149bp|location=Sequence derived from alignment at scaffold_9:778409..781557+ (Nannochloropsis oceanica) GTGCTTCTTTCTTTCTTTGTTTTGCATGCCCGACCATTGAGTCCAAGGCT
CCAGCGTTTCAAAAATGTGCCGTCCCTTATGTACGTATACCTATTCTTCT
ATGCAGGGTCTGCTTACCGTGGAGACGGCGTGCCCATCGATTGGATGCTT
CGTTAGCCCCCAACCCGGTATCATCGTCAACGACCAGCAGGAGCAGCAAC
GAACAAAGCACGAGCCCCACCGAAACCCTTGCATACGACCATGCCCACCC
CGGCTATTGAGGGCCTCCTGGTCTCTCTTGCCCAGTGCCTGTATGATTAT
CCTTCGGCTCACTACCACCACTGCCAGCACGAGGAAGCGGAGAGTAGTGA
AAAGTGGGGAAGCGGTGCAGTCCGACGGCACTTGCGGGAACTCGACGAGG
AGGCGGTCGATGCGCTTGTCCACGCATTGGAAGAGCACATTGTGATGGAA
GCACTACCACGGCAGCAATATCAGTACCAGCATCAGCAGGGAGAGCGACC
ACCACCAGACCAGCAGCACCACCACCATCACCAAAGCCAATACGAAACCC
ACCAGCAGCAGCAAGGCGAGGATGAAGGGGAGCTCCTGAAAGCAAGCGAT
ATCCTCCAAGTTCTTCTATCGTGGCGTAGAACCGGCGTGAAGGCTATCAA
AAGCTGCATACAGATGATCAGGGATGGTCAATTAAAAGGGAGGCAGGCCG
TGTGGTGTGTGTCGGAGATCAGGCAGGCATTGACGACGGGGGAAGGGCTG
GCGGTCTTGACGCATTACTCTCATGAAGAAGAAGACGAGGAGGGGTTGGG
CGAGAAACAAGAGAACGAGGAAGAAGGAGAAGAAGTATGGGAAAATGGAA
ATGGCAAGGGAAAAGCGAAGAAGAGGAGAACTCCTACCAGCGGAGGGGGC
AGCAACAGCACTAGCAGCACCAGCAGGAAGAGGAGGCGTCCCTCCACCAA
TAATAATAGCTATCTGTCATCCCCCTTATACATTCATCGAAGACCAAGCG
ATATCCAGCTTCGAGCATACGAAGAGTCATTGAGAGAGTTGAGAGGTCTC
CTCTTCTCTACCCTTGCCCTCCTCACTTCCCCCTCCTCATCCCCTTCCTC
CTCCACTTCCTCCTCCACTTCCACCTCACTCCTCATGACTGACTGGGATG
CGGTTCGTCTGCAGAATTTCCTTCTTGTCCTCGACATCTTTTGGCCCCTC
CTCGTCCTCGCTCAACGCCTCGAAGATGAACTCAGCCTGTGGACCGCCAA
GAAGCAGCAGCAGCGACAGCAGCAGCAGCAACGACAGCGGCAGCAACATG
GACAAAGACCTCCGCAGCAGCAGGAGGGAGCGGAGGAAGGGCAGAAGGAG
GAAGAGTTCGTGTGGGTTCGGCCTGCACGGAGTACAGGGGAGGAGGTGGG
GTTGGCGGTGCTGGGGGCAGCTTGGCCCCTCCCCCTCACCCTCCCTCTGT
TCAACCTGTGCAGGGATATGCATGAGTTTTTCGTCGAGGAGGAGGAGGAA
GAGGAGGAGAAGGAGGGAAGGAGTGATGGAAAAGTAGCATCGTGCTCGTG
GGGTAGAGTACGGGCGAAAATTAGAGTGAATACACGAGGGGAGGAGGAAG
GGGAGGGAGGGGAGGAAGGGAGGGAGGGAGGGAAGAAGGGGCGGAAGCAA
CGGCAGGAGCTATTGAGTAATGACGGACCCGGCTTAATGCGCCAGTGCTT
GGTATTGGCGGAAGCGTACGAGAAGGAGGATGGGAGGGAGGGCGGAGGGA
AAGGCAACCCTTGGATTGGGCTGTTCAGGGAGCTGTACCACCATGTGCCG
TGTGAGGCGATAGCGACCACAGAGCTGGTCGTCGAGCAGTGCATTAAGCA
GGCCTTGCCGTGCGTGGATTTGTTGGTGAGGGATCTGGAAGGACGACTTC
TTGCCTCGGTCCCTTTCTCCCACTTATCCTCCCCCTCAACCTCCTCCTCC
TCCTCGAGGAAGGCTGCACCAGCCCTAGGGTGGCAGGACCTCGCTCTCCT
CCTCCTCCTCCAAAGGTCAGTCTCGGGCTGGGCGTCGCTGTCGTCCGTGC
TGCTTGGAATGGGTAGAGGAGGGGGAAGAGGAGGAGGACGAGGAGGAAGC
GGAGGAGGAGGAGGAGGAGTTCTCTGCTCACAGCAGCGCATGAATCACGT
TCTCCTCCGACTCCTAACTCATCTCAGTGAAGACGCCCGCATTCTCCTCC
CCCCTCCTCCTTCCTCCTCCTCCTCCTCCTCCTCCTCTGTCTGGGATCCA
CCCATCAAAAAGAACCTTTCCTCTCTCCTCTCCTCCTCCTCGCCCTCCTC
CCCCTCCTCCTCCTTCCTCCGTCGCGCCTCCCTCCTCTTCACCCATGTCG
TCACTCATAACTACTCCCCTCGACGCTTCCTCGGCCGCCTTCCCCTTCAA
CGTTCTTCCCAGCTCTTCGCCCTTTTCTTTGCCTGGCTCCAAGAGGTCCA
TCCTACCTCTGCCTCCCTCCCTCCCTCCCTCCTTCGTGATCTGGCAATAG
AGGGCATAAGCGTAGTGTATGGAGAGGTGCCGGAAGGACAGGCACGCATT
CTCTCCTCCCTCCTTGGGGCCATCGTCGAACACGCCCAAAACGCCCGCCC
TCCGCAACAGCACGAGCAGCTCCAACCGCATCAGCAGCACCCGCAGCAGC
ATCTGTCGCCGTTGCGGGCCCGGCCTTCTTCTTGGTCTTCATCCAAGCCC
CTTTCCCTCCTCGTCGCCGCGCTGCATACGCTCACCACCTCCCATCCCAC
CACCCTCCGTCCTCACACGCAGCCCTTTCAACAACTCCTCTCCCAGCTCC
CTTCCCTCCCTCCCTCCCTCACCTCCTCCCTCCTCCACGCCACCCTCCCA
CTCGCCTGTGCCTGCCCCTCCTTCCTCGATGCCCTCCTGGCCGCCATCCG
GAAAAGCATCGTCCAAAATGATGTGTCTGGACGACTATTCGGCATGAGTG
CCCTAACCTCCCTCCTCGGGCAATACCGCGGCCTGCTGGCCCTCCCTGAG
CGGTGTGAGGAAGTGGCTTCCATGTTCGATCGGCTCCTCGCCCTCGCCCT
CCCCCTCGCCCTCAAGAGTAAGCTGTACCGGTCCATCACCGACGCGATGA
GGGAGGAAGGGAGGGGGGAAGGGAGGGAGGGAGGGTTGATGAATCTGTC back to topCoding sequence (CDS) from alignment at scaffold_9:778409..781557+ >mRNA_4852 ID=mRNA_4852|Name=jgi.p|Nanoce1779_2|444768|organism=Nannochloropsis oceanica|type=CDS|length=2909bp|location=Sequence derived from alignment at scaffold_9:778409..781557+ (Nannochloropsis oceanica) ATGCCCACCCCGGCTATTGAGGGCCTCCTGGTCTCTCTTGCCCAGTGCCT GTATGATTATCCTTCGGCTCACTACCACCACTGCCAGCACGAGGAAGCGG AGAGTAGTGAAAAGTGGGGAAGCGGTGCAGTCCGACGGCACTTGCGGGAA CTCGACGAGGAGGCGGTCGATGCGCTTGTCCACGCATTGGAAGAGCACAT TGTGATGGAAGCACTACCACGGCAGCAATATCAGTACCAGCATCAGCAGG GAGAGCGACCACCACCAGACCAGCAGCACCACCACCATCACCAAAGCCAA TACGAAACCCACCAGCAGCAGCAAGGCGAGGATGAAGGGGAGCTCCTGAA AGCAAGCGATATCCTCCAAGTTCTTCTATCGTGGCGTAGAACCGGCGTGA AGGCTATCAAAAGCTGCATACAGATGATCAGGGATGGTCAATTAAAAGGG AGGCAGGCCGTGTGGTGTGTGTCGGAGATCAGGCAGGCATTGACGACGGG GGAAGGGCTGGCGGTCTTGACGCATTACTCTCATGAAGAAGAAGACGAGG AGGGGTTGGGCGAGAAACAAGAGAACGAGGAAGAAGGAGAAGAAGTATGG GAAAATGGAAATGGCAAGGGAAAAGCGAAGAAGAGGAGAACTCCTACCAG CGGAGGGGGCAGCAACAGCACTAGCAGCACCAGCAGGAAGAGGAGGCGTC CCTCCACCAATAATAATAGCTATCTGTCATCCCCCTTATACATTCATCGA AGACCAAGCGATATCCAGCTTCGAGCATACGAAGAGTCATTGAGAGAGTT GAGAGGTCTCCTCTTCTCTACCCTTGCCCTCCTCACTTCCCCCTCCTCAT CCCCTTCCTCCTCCACTTCCTCCTCCACTTCCACCTCACTCCTCATGACT GACTGGGATGCGGTTCGTCTGCAGAATTTCCTTCTTGTCCTCGACATCTT TTGGCCCCTCCTCGTCCTCGCTCAACGCCTCGAAGATGAACTCAGCCTGT GGACCGCCAAGAAGCAGCAGCAGCGACAGCAGCAGCAGCAACGACAGCGG CAGCAACATGGACAAAGACCTCCGCAGCAGCAGGAGGGAGCGGAGGAAGG GCAGAAGGAGGAAGAGTTCGTGTGGGTTCGGCCTGCACGGAGTACAGGGG AGGAGGTGGGGTTGGCGGTGCTGGGGGCAGCTTGGCCCCTCCCCCTCACC CTCCCTCTGTTCAACCTGTGCAGGGATATGCATGAGTTTTTCGTCGAGGA GGAGGAGGAAGAGGAGGAGAAGGAGGGAAGGAGTGATGGAAAAGTAGCAT CGTGCTCGTGGGGTAGAGTACGGGCGAAAATTAGAGTGAATACACGAGGG GAGGAGGAAGGGGAGGGAGGGGAGGAAGGGAGGGAGGGAGGGAAGAAGGG GCGGAAGCAACGGCAGGAGCTATTGAGTAATGACGGACCCGGCTTAATGC GCCAGTGCTTGGTATTGGCGGAAGCGTACGAGAAGGAGGATGGGAGGGAG GGCGGAGGGAAAGGCAACCCTTGGATTGGGCTGTTCAGGGAGCTGTACCA CCATGTGCCGTGTGAGGCGATAGCGACCACAGAGCTGGTCGTCGAGCAGT GCATTAAGCAGGCCTTGCCGTGCGTGGATTTGTTGGTGAGGGATCTGGAA GGACGACTTCTTGCCTCGGTCCCTTTCTCCCACTTATCCTCCCCCTCAAC CTCCTCCTCCTCCTCGAGGAAGGCTGCACCAGCCCTAGGGTGGCAGGACC TCGCTCTCCTCCTCCTCCTCCAAAGGTCAGTCTCGGGCTGGGCGTCGCTG TCGTCCGTGCTGCTTGGAATGGGTAGAGGAGGGGGAAGAGGAGGAGGACG AGGAGGAAGCGGAGGAGGAGGAGGAGGAGTTCTCTGCTCACAGCAGCGCA TGAATCACGTTCTCCTCCGACTCCTAACTCATCTCAGTGAAGACGCCCGC ATTCTCCTCCCCCCTCCTCCTTCCTCCTCCTCCTCCTCCTCCTCCTCTGT CTGGGATCCACCCATCAAAAAGAACCTTTCCTCTCTCCTCTCCTCCTCCT CGCCCTCCTCCCCCTCCTCCTCCTTCCTCCGTCGCGCCTCCCTCCTCTTC ACCCATGTCGTCACTCATAACTACTCCCCTCGACGCTTCCTCGGCCGCCT TCCCCTTCAACGTTCTTCCCAGCTCTTCGCCCTTTTCTTTGCCTGGCTCC AAGAGGTCCATCCTACCTCTGCCTCCCTCCCTCCCTCCCTCCTTCGTGAT CTGGCAATAGAGGGCATAAGCGTAGTGTATGGAGAGGTGCCGGAAGGACA GGCACGCATTCTCTCCTCCCTCCTTGGGGCCATCGTCGAACACGCCCAAA ACGCCCGCCCTCCGCAACAGCACGAGCAGCTCCAACCGCATCAGCAGCAC CCGCAGCAGCATCTGTCGCCGTTGCGGGCCCGGCCTTCTTCTTGGTCTTC ATCCAAGCCCCTTTCCCTCCTCGTCGCCGCGCTGCATACGCTCACCACCT CCCATCCCACCACCCTCCGTCCTCACACGCAGCCCTTTCAACAACTCCTC TCCCAGCTCCCTTCCCTCCCTCCCTCCCTCACCTCCTCCCTCCTCCACGC CACCCTCCCACTCGCCTGTGCCTGCCCCTCCTTCCTCGATGCCCTCCTGG CCGCCATCCGGAAAAGCATCGTCCAAAATGATGTGTCTGGACGACTATTC GGCATGAGTGCCCTAACCTCCCTCCTCGGGCAATACCGCGGCCTGCTGGC CCTCCCTGAGCGGTGTGAGGAAGTGGCTTCCATGTTCGATCGGCTCCTCG CCCTCGCCCTCCCCCTCGCCCTCAAGAGTAAGCTGTACCGGTCCATCACC GACGCGATGAGGGAGGAAGGGAGGGGGGAAGGGAGGGAGGGAGGGTTGAT GAATCTGTC back to top
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