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Properties
| Property Name | Value |
|---|
| TranscriptId | 623258 |
| Track | FilteredModels2 |
| ProteinId | 623172 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_9 | supercontig | scaffold_9:753441..754461 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_4841 ID=mRNA_4841|Name=jgi.p|Nanoce1779_2|623172|organism=Nannochloropsis oceanica|type=mRNA|length=879bp
ATGTCTGCGCCATCGGGCCCCATTGTAGTCGTCACGGGCAGTAACAAGGG
TATCGGCTTGGAAATTCTGAAGAAACTCGCACCAACTTCGTCCGTCATGA
TTCTTGCAGCTCGAGACCCCGGCCGCGGGCAGGTGGCTGCACAAAAGCTG
CGTGAGGAGGGGCTGGATAACGTGGTGTTTCGTCCTTTGGACATTTCTTC
TTCCGAGTCCATTCAGCAGTTTGCCGCCGGGATGGAGAAGGACTTTGGGC
TCACGGATGTACTTGTCAATAACGCAGGTATTGCATTCAAAAACAGCGAC
CCCACCCCCTTCCGGGAACAAGCCACTCCCACCCTCAAGACCAACTTCTG
GGGCACAATCGAACTGATCGACGCCATGACACCGCTATTGCGCAAGGCGA
AAATTGAAACTCCTCGCATTGTGAATGTGGCCAGCCAAAGTGGCCGCTTG
AGCATCTTAAATACTGATAAGAACAAGCAGGAGGAGTTTTCCTCGCCGGG
CTTGACGAGAGAGCGATTGTCTGCGTTGGTGAGTAAGTTTGAGAAAGATG
TGAAAGAAGGGAAGCACAAGGAGGAGGGATGGCCCAATACCTGTTATGGG
ATGAGTAAATTGGCCTTGATCTCGTTCGGAAAGGTATTTGCACACGAAGA
GAAAGAAGGGAAGGCAAAGCGAGGGATCGGGGGAGAGGGCGAGGGAAGGA
AGGCAATTTGGTTGGCTTCGTGCTGCCCGGGGTGGTGTGATACGGATATG
AGCAGCCATAGTGGCCCGAGGAGTGCGGAACACGGCGCACGAACGCCAGC
TTGGCTAGCATCGAAGGGAGTAGAGGATGGAGCGAAGGCGGGAGGATTTT
TTTACGACGAGAAGGAGATAAATTGGTAG back to topprotein sequence of jgi.p|Nanoce1779_2|623172 >mRNA_4841-protein ID=mRNA_4841-protein|Name=jgi.p|Nanoce1779_2|623172|organism=Nannochloropsis oceanica|type=polypeptide|length=293bp
MSAPSGPIVVVTGSNKGIGLEILKKLAPTSSVMILAARDPGRGQVAAQKL
REEGLDNVVFRPLDISSSESIQQFAAGMEKDFGLTDVLVNNAGIAFKNSD
PTPFREQATPTLKTNFWGTIELIDAMTPLLRKAKIETPRIVNVASQSGRL
SILNTDKNKQEEFSSPGLTRERLSALVSKFEKDVKEGKHKEEGWPNTCYG
MSKLALISFGKVFAHEEKEGKAKRGIGGEGEGRKAIWLASCCPGWCDTDM
SSHSGPRSAEHGARTPAWLASKGVEDGAKAGGFFYDEKEINW* back to topmRNA from alignment at scaffold_9:753441..754461- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_4841 ID=mRNA_4841|Name=jgi.p|Nanoce1779_2|623172|organism=Nannochloropsis oceanica|type=mRNA|length=1021bp|location=Sequence derived from alignment at scaffold_9:753441..754461- (Nannochloropsis oceanica)
ATGTCTGCGCCATCGGGCCCCATTGTAGTCGTCACGGGCAGTAACAAGGG
TATCGGCTTGGAAATTCTGAAGAAACTCGCACCAACTTCGTCCGTCATGA
TTCTTGCAGCTCGAGACCCCGGCCGCGGGCAGGTGGCTGCACAAAAGCTG
CGTGAGGAGGGGCTGGATAACGTGGTGTTTCGTCCTTTGGACATTTCTTC
TTCCGAGTCCATTCAGCAGTTTGCCGCCGGGATGGAGAAGGACTTTGGGC
TCACGGATGTACTTGTCAATAACGCAGGTACGTGTCACAGTGATGAGAGT
GATGTATTGGGTGGGCAGAGGGCGTGTTTGAGGTGCTTTGCGCAGCGACT
TCTATTGTAGGTACACATTATCGCCCATGTTGCGCCTCCCTGTTCACTCT
ATCCCTCCTTTTCCTCCAGGTATTGCATTCAAAAACAGCGACCCCACCCC
CTTCCGGGAACAAGCCACTCCCACCCTCAAGACCAACTTCTGGGGCACAA
TCGAACTGATCGACGCCATGACACCGCTATTGCGCAAGGCGAAAATTGAA
ACTCCTCGCATTGTGAATGTGGCCAGCCAAAGTGGCCGCTTGAGCATCTT
AAATACTGATAAGAACAAGCAGGAGGAGTTTTCCTCGCCGGGCTTGACGA
GAGAGCGATTGTCTGCGTTGGTGAGTAAGTTTGAGAAAGATGTGAAAGAA
GGGAAGCACAAGGAGGAGGGATGGCCCAATACCTGTTATGGGATGAGTAA
ATTGGCCTTGATCTCGTTCGGAAAGGTATTTGCACACGAAGAGAAAGAAG
GGAAGGCAAAGCGAGGGATCGGGGGAGAGGGCGAGGGAAGGAAGGCAATT
TGGTTGGCTTCGTGCTGCCCGGGGTGGTGTGATACGGATATGAGCAGCCA
TAGTGGCCCGAGGAGTGCGGAACACGGCGCACGAACGCCAGCTTGGCTAG
CATCGAAGGGAGTAGAGGATGGAGCGAAGGCGGGAGGATTTTTTTACGAC
GAGAAGGAGATAAATTGGTAG back to topCoding sequence (CDS) from alignment at scaffold_9:753441..754461- >mRNA_4841 ID=mRNA_4841|Name=jgi.p|Nanoce1779_2|623172|organism=Nannochloropsis oceanica|type=CDS|length=1758bp|location=Sequence derived from alignment at scaffold_9:753441..754461- (Nannochloropsis oceanica)
GTATTGCATTCAAAAACAGCGACCCCACCCCCTTCCGGGAACAAGCCACT
CCCACCCTCAAGACCAACTTCTGGGGCACAATCGAACTGATCGACGCCAT
GACACCGCTATTGCGCAAGGCGAAAATTGAAACTCCTCGCATTGTGAATG
TGGCCAGCCAAAGTGGCCGCTTGAGCATCTTAAATACTGATAAGAACAAG
CAGGAGGAGTTTTCCTCGCCGGGCTTGACGAGAGAGCGATTGTCTGCGTT
GGTGAGTAAGTTTGAGAAAGATGTGAAAGAAGGGAAGCACAAGGAGGAGG
GATGGCCCAATACCTGTTATGGGATGAGTAAATTGGCCTTGATCTCGTTC
GGAAAGGTATTTGCACACGAAGAGAAAGAAGGGAAGGCAAAGCGAGGGAT
CGGGGGAGAGGGCGAGGGAAGGAAGGCAATTTGGTTGGCTTCGTGCTGCC
CGGGGTGGTGTGATACGGATATGAGCAGCCATAGTGGCCCGAGGAGTGCG
GAACACGGCGCACGAACGCCAGCTTGGCTAGCATCGAAGGGAGTAGAGGA
TGGAGCGAAGGCGGGAGGATTTTTTTACGACGAGAAGGAGATAAATTGGT
AGATGTCTGCGCCATCGGGCCCCATTGTAGTCGTCACGGGCAGTAACAAG
GGTATCGGCTTGGAAATTCTGAAGAAACTCGCACCAACTTCGTCCGTCAT
GATTCTTGCAGCTCGAGACCCCGGCCGCGGGCAGGTGGCTGCACAAAAGC
TGCGTGAGGAGGGGCTGGATAACGTGGTGTTTCGTCCTTTGGACATTTCT
TCTTCCGAGTCCATTCAGCAGTTTGCCGCCGGGATGGAGAAGGACTTTGG
GCTCACGGATGTACTTGTCAATAACGCAGGTATTGCATTCAAAAACAGCG
ACCCCACCCCCTTCCGGGAACAAGCCACTCCCACCCTCAAGACCAACTTC
TGGGGCACAATCGAACTGATCGACGCCATGACACCGCTATTGCGCAAGGC
GAAAATTGAAACTCCTCGCATTGTGAATGTGGCCAGCCAAAGTGGCCGCT
TGAGCATCTTAAATACTGATAAGAACAAGCAGGAGGAGTTTTCCTCGCCG
GGCTTGACGAGAGAGCGATTGTCTGCGTTGGTGAGTAAGTTTGAGAAAGA
TGTGAAAGAAGGGAAGCACAAGGAGGAGGGATGGCCCAATACCTGTTATG
GGATGAGTAAATTGGCCTTGATCTCGTTCGGAAAGGTATTTGCACACGAA
GAGAAAGAAGGGAAGGCAAAGCGAGGGATCGGGGGAGAGGGCGAGGGAAG
GAAGGCAATTTGGTTGGCTTCGTGCTGCCCGGGGTGGTGTGATACGGATA
TGAGCAGCCATAGTGGCCCGAGGAGTGCGGAACACGGCGCACGAACGCCA
GCTTGGCTAGCATCGAAGGGAGTAGAGGATGGAGCGAAGGCGGGAGGATT
TTTTTACGACGAGAAGGAGATAAATTGGTAGATGTCTGCGCCATCGGGCC
CCATTGTAGTCGTCACGGGCAGTAACAAGGGTATCGGCTTGGAAATTCTG
AAGAAACTCGCACCAACTTCGTCCGTCATGATTCTTGCAGCTCGAGACCC
CGGCCGCGGGCAGGTGGCTGCACAAAAGCTGCGTGAGGAGGGGCTGGATA
ACGTGGTGTTTCGTCCTTTGGACATTTCTTCTTCCGAGTCCATTCAGCAG
TTTGCCGCCGGGATGGAGAAGGACTTTGGGCTCACGGATGTACTTGTCAA
TAACGCAG back to top
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