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Properties
| Property Name | Value |
|---|
| TranscriptId | 588018 |
| Track | FilteredModels2 |
| ProteinId | 587932 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_9 | supercontig | scaffold_9:649439..650735 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_4797 ID=mRNA_4797|Name=jgi.p|Nanoce1779_2|587932|organism=Nannochloropsis oceanica|type=mRNA|length=1171bp
ATGGTGAACGTACGTGCTTGCTTTCTCTTGTTTTTGATGTTCTCATTAGT
TTCTACCTCCTGTGGCCTTCTCTTGCAAGGGGCCTTCTTAATGAAGTCTG
GGGTGGTAAAACTGCGGCATTTTTTTATCCTATGATCCTATAATACCAAT
AGATCCAATATACCAATATATCAAATATCTATCATATCATATCCGCATGT
GTATATATCCGCACGTTCCTTCAAGCATGTTCCCAATTGGCAGGTTGACT
TTCTCCCGCACAATCTCGGTACTGTATGACCACGAGTGAATGCCTCTTTC
GTTGACATACATAGAAGCAGAACACAGCATCAATGAGCACGGAGGACGGT
GCCTCCGAAAGCAAAAGGATGAAGCGGCGGGCCGTCAACAAAAAAGGGTG
GAACCCGCATGCTACTCCTCCGCGAAACAAGCAGCTCAAAGAAGAGGAGG
GACAAGAGGAGGACAGCCCGACTTTGCCTTCCTTTCGTAAGACATCTGTG
CAGGCACTGCAAGAGCTCTTCGTCAAGGCCAAAGCAAACATCAACGGAGA
AAGTGGAGTGCAGCAGCCGGCAGACTATCTGCGTCGATTTGCCGAGGAGG
TGGAGGAAGCAATCTTTGAGCAGTACGGGAACATTTCCAACCCGTACGAA
TCAACACGCGCATACGGCAATCAAATCCGTACTCTAAGGTACAATATTCT
CCAAAATAAGGACTTGCAAGGTCGCATAATAACAGGCGGCCTCAATGCTA
TGACCATTGCACGTTTGACCCCCGAAGAAATGCTGACGACGACCGCGCGG
CTGGAGCAGCATGAAAAAGAGGCCAAGGCGTATGACATGCAACGACTGGA
TCGGCATCTTGCACCGCAGGTGGAAGAAGAGCTGGCGGCCCGTATGGCAG
GAGGAGGATTGACATGTCCCGTGTGCGACTCGGATGAGGTTGGTATGATG
CATCGTCACAACGCTTTGGAAGAAGAACAGCAACGACAGGTGGAGATGGC
TTGTAATGCTTGTGGCGCAACTATGGCACAGGAGGAGTAATAACGAGAGG
GGAGCAACATAGAGAAAAGCAAACATACATAAGCCAAGAGGGTCTGTCAA
TTACTCAGCACAGGAATAAAGGCAATGTCAAAAAACAAGAGCGGAAAAAC
AAAGGACCGACATTTCGACAA back to topprotein sequence of jgi.p|Nanoce1779_2|587932 >mRNA_4797-protein ID=mRNA_4797-protein|Name=jgi.p|Nanoce1779_2|587932|organism=Nannochloropsis oceanica|type=polypeptide|length=236bp
MSTEDGASESKRMKRRAVNKKGWNPHATPPRNKQLKEEEGQEEDSPTLPS
FRKTSVQALQELFVKAKANINGESGVQQPADYLRRFAEEVEEAIFEQYGN
ISNPYESTRAYGNQIRTLRYNILQNKDLQGRIITGGLNAMTIARLTPEEM
LTTTARLEQHEKEAKAYDMQRLDRHLAPQVEEELAARMAGGGLTCPVCDS
DEVGMMHRHNALEEEQQRQVEMACNACGATMAQEE* back to topmRNA from alignment at scaffold_9:649439..650735+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_4797 ID=mRNA_4797|Name=jgi.p|Nanoce1779_2|587932|organism=Nannochloropsis oceanica|type=mRNA|length=1297bp|location=Sequence derived from alignment at scaffold_9:649439..650735+ (Nannochloropsis oceanica)
ATGGTGAACGTACGTGCTTGCTTTCTCTTGTTTTTGATGTTCTCATTAGT
TTCTACCTCCTGTGGCCTTCTCTTGCAAGGGGCCTTCTTAATGAAGTCTG
GGGTGGTAAAACTGCGGCATTTTTTTATCCTATGATCCTATAATACCAAT
AGATCCAATATACCAATATATCAAATATCTATCATATCATATCCGCATGT
GTATATATCCGCACGTTCCTTCAAGCATGTTCCCAATTGGCAGGTTGACT
TTCTCCCGCACAATCTCGGTACTGTATGACCACGAGTGAATGCCTCTTTC
GTTGACATACATAGAAGCAGAACACAGCATCAATGAGCACGGAGGACGGT
GCCTCCGAAAGCAAAAGGATGAAGCGGCGGGCCGTCAACAAAAAAGGGTG
GAACCCGCATGCTACTCCTCCGCGAAACAAGCAGCTCAAAGAAGAGGAGG
GACAAGAGGAGGACAGCCCGACTTTGCCTTCCTTTCGTAAGACATCTGTG
CAGGCACTGCAAGAGCTCTTCGTCAAGGCCAAAGCAAACATCAACGGAGA
AAGTGGAGTGCAGCAGCCGGCAGACTATCTGCGTCGATTTGCCGAGGAGG
TGGAGGAAGCAATCTTTGAGCAGTACGGGAACATTTCCAACCCGTACGAA
TCAACACGCGCATACGGCAATCAAATCCGTACTCTAAGGTACAATATTCT
CCAAAATAAGGACTTGCAAGGTCGCATAATAACAGGCGGCCTCAATGCTA
TGACCATTGCACGTTTGACCCCCGAAGAAATGCTGACGACGACCGCGCGG
CTGGAGCAGCATGAAAAAGAGGCCAAGGCGTATGACATGCAACGACTGGA
TCGGCATCTTGCACCGCAGGTGGGGATAGGGAATACATGAGGAAAGAAAT
CGACATTTTTAAGAGGATCATTTATAATGTTTCATTGTCAGTATATATAT
CCCATCCAGTCAGGTGATATCCCATCCAATCCCGCACCCACACAGGTGGA
AGAAGAGCTGGCGGCCCGTATGGCAGGAGGAGGATTGACATGTCCCGTGT
GCGACTCGGATGAGGTTGGTATGATGCATCGTCACAACGCTTTGGAAGAA
GAACAGCAACGACAGGTGGAGATGGCTTGTAATGCTTGTGGCGCAACTAT
GGCACAGGAGGAGTAATAACGAGAGGGGAGCAACATAGAGAAAAGCAAAC
ATACATAAGCCAAGAGGGTCTGTCAATTACTCAGCACAGGAATAAAGGCA
ATGTCAAAAAACAAGAGCGGAAAAACAAAGGACCGACATTTCGACAA back to topCoding sequence (CDS) from alignment at scaffold_9:649439..650735+ >mRNA_4797 ID=mRNA_4797|Name=jgi.p|Nanoce1779_2|587932|organism=Nannochloropsis oceanica|type=CDS|length=1416bp|location=Sequence derived from alignment at scaffold_9:649439..650735+ (Nannochloropsis oceanica)
ATGAGCACGGAGGACGGTGCCTCCGAAAGCAAAAGGATGAAGCGGCGGGC
CGTCAACAAAAAAGGGTGGAACCCGCATGCTACTCCTCCGCGAAACAAGC
AGCTCAAAGAAGAGGAGGGACAAGAGGAGGACAGCCCGACTTTGCCTTCC
TTTCGTAAGACATCTGTGCAGGCACTGCAAGAGCTCTTCGTCAAGGCCAA
AGCAAACATCAACGGAGAAAGTGGAGTGCAGCAGCCGGCAGACTATCTGC
GTCGATTTGCCGAGGAGGTGGAGGAAGCAATCTTTGAGCAGTACGGGAAC
ATTTCCAACCCGTACGAATCAACACGCGCATACGGCAATCAAATCCGTAC
TCTAAGGTACAATATTCTCCAAAATAAGGACTTGCAAGGTCGCATAATAA
CAGGCGGCCTCAATGCTATGACCATTGCACGTTTGACCCCCGAAGAAATG
CTGACGACGACCGCGCGGCTGGAGCAGCATGAAAAAGAGGCCAAGGCGTA
TGACATGCAACGACTGGATCGGCATCTTGCACCGCAGGTGGAAGAAGAGC
TGGCGGCCCGTATGGCAGGAGGAGGATTGACATGTCCCGTGTGCGACTCG
GATGAGGTTGGTATGATGCATCGTCACAACGCTTTGGAAGAAGAACAGCA
ACGACAGGTGGAGATGGCTTGTAATGCTTGTGGCGCAACTATGGCACAGG
AGGAGTAAATGAGCACGGAGGACGGTGCCTCCGAAAGCAAAAGGATGAAG
CGGCGGGCCGTCAACAAAAAAGGGTGGAACCCGCATGCTACTCCTCCGCG
AAACAAGCAGCTCAAAGAAGAGGAGGGACAAGAGGAGGACAGCCCGACTT
TGCCTTCCTTTCGTAAGACATCTGTGCAGGCACTGCAAGAGCTCTTCGTC
AAGGCCAAAGCAAACATCAACGGAGAAAGTGGAGTGCAGCAGCCGGCAGA
CTATCTGCGTCGATTTGCCGAGGAGGTGGAGGAAGCAATCTTTGAGCAGT
ACGGGAACATTTCCAACCCGTACGAATCAACACGCGCATACGGCAATCAA
ATCCGTACTCTAAGGTACAATATTCTCCAAAATAAGGACTTGCAAGGTCG
CATAATAACAGGCGGCCTCAATGCTATGACCATTGCACGTTTGACCCCCG
AAGAAATGCTGACGACGACCGCGCGGCTGGAGCAGCATGAAAAAGAGGCC
AAGGCGTATGACATGCAACGACTGGATCGGCATCTTGCACCGCAGGTGGA
AGAAGAGCTGGCGGCCCGTATGGCAGGAGGAGGATTGACATGTCCCGTGT
GCGACTCGGATGAGGTTGGTATGATGCATCGTCACAACGCTTTGGAAGAA
GAACAGCAACGACAGGTGGAGATGGCTTGTAATGCTTGTGGCGCAACTAT
GGCACAGGAGGAGTAA back to top
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