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Properties
| Property Name | Value |
|---|
| TranscriptId | 527451 |
| Track | FilteredModels2 |
| ProteinId | 527365 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_9 | supercontig | scaffold_9:635059..636066 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_4791 ID=mRNA_4791|Name=jgi.p|Nanoce1779_2|527365|organism=Nannochloropsis oceanica|type=mRNA|length=933bp
ATGGCAGATGAAGCAGGAAGAGCACTCGGCGTAGCCGTCAAAATCGAGGA
GTCAGACGCAGAGATTCTGGCAAAGCTTGATCCATTGACAGACACAAAAT
TCGGCTTGGGGCGCATGGAAATGGGCAGTAAAGAGTGCTTGGCGGGTACG
GTGAAGAAATATGATACGCATGTGTTTGTTTTGTGGAAGAAAGCGACTGA
TTGGCCTAAAAATGTGGAGGATGGAGAAAAGGGGAGTATTGCTATAACCC
TCCCTCAGGCCTTGCATGCTGCATTAAAGAAACACGCGGAAGGAATAACA
ACAGGCAAGGCTAAGTTGAACGTGGCCGAGTGCAGTGAGGAGGAAGGCGA
CGAGGACGGGACTCTGTTGTTGTTCCCCCAGGAATTGTGTATTACCGGAG
TGACTGTGGAGAATGCCGAGGCTGTGGTGGAAGCTCTGGGTAGGTTGGCG
GGGATTGAGGGGGTGGATGTGATGGATCGGATACCGCGGAATCATGTGTT
TGTGTGCTGCCATTTAAAGAGGGATAAGAGGTGTGGGTTGGTGGGCCCTT
TTTTGATCAGGGAGTTCAGGAAATTGATTACGTTACAGCGAGGGAAGGAG
GGGGAGAATAACGATGTGTTTGAATTTGAGTGTCCGGTACGAGCTTGCAG
TCATGTTGGAGGCCATGCGTATGCTGGGAATGTGATCACATTCAGCAGGA
GGGAGAAAGAGGGAGGAGGGAGGAAGGGAGGGAGGGTAGTGGGGGATTGG
TGGGGGTATGTCACGCCGGTGGTTGTCAAGGATTTAGTGGAGAGACACCT
TGTAAAGGGAGAGTTGCTGGAGGGTGTATGGAGGGGACAGATGGGCTTGG
CCGAGGAGGAGCAGAAGCAGGTGGCACTGAAGGAGGGGAAGTGCGACGGG
TGCGCTTGTGGGGAAAATTCGACGGCGTCGTAG back to topprotein sequence of jgi.p|Nanoce1779_2|527365 >mRNA_4791-protein ID=mRNA_4791-protein|Name=jgi.p|Nanoce1779_2|527365|organism=Nannochloropsis oceanica|type=polypeptide|length=311bp
MADEAGRALGVAVKIEESDAEILAKLDPLTDTKFGLGRMEMGSKECLAGT
VKKYDTHVFVLWKKATDWPKNVEDGEKGSIAITLPQALHAALKKHAEGIT
TGKAKLNVAECSEEEGDEDGTLLLFPQELCITGVTVENAEAVVEALGRLA
GIEGVDVMDRIPRNHVFVCCHLKRDKRCGLVGPFLIREFRKLITLQRGKE
GENNDVFEFECPVRACSHVGGHAYAGNVITFSRREKEGGGRKGGRVVGDW
WGYVTPVVVKDLVERHLVKGELLEGVWRGQMGLAEEEQKQVALKEGKCDG
CACGENSTAS* back to topmRNA from alignment at scaffold_9:635059..636066- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_4791 ID=mRNA_4791|Name=jgi.p|Nanoce1779_2|527365|organism=Nannochloropsis oceanica|type=mRNA|length=1008bp|location=Sequence derived from alignment at scaffold_9:635059..636066- (Nannochloropsis oceanica)
ATGGCAGATGAAGCAGGAAGAGCACTCGGCGTAGCCGTCAAAATCGAGGA
GTCAGACGCAGAGATTCTGGCAAAGCTTGATCCATTGACAGACACAAAAT
TCGGCTTGGGGCGCATGGAAATGGGCAGTAAAGAGTGCTTGGCGGGTACG
GTGAAGAAATATGATACGCATGTGTTTGTTTTGTGGAAGAAAGCGACTGA
TTGGCCTAAAAATGTGGAGGATGGAGAAAAGGGGAGTATTGCTATAACCC
TCCCTCAGGCCTTGCATGCTGCATTAAAGAAACACGCGGAAGGAATAACA
ACAGGCAAGGCTAAGTTGAACGTGGCCGAGTGCAGTGAGGAGGAAGGCGA
CGAGGACGGGACTCTGTTGTTGTTCCCCCAGGAATTGTGTATTACCGGAG
TGACTGTGGAGAATGCCGAGGCTGTGGTGGAAGCTCTGTTGGTGGGGACG
GAGGGGGGAGGTGAGGACGCGGAGGTGGGAGGGGGTCTAGGGGAGCGGGT
GGCCGAGACGAGGGGTAGGTTGGCGGGGATTGAGGGGGTGGATGTGATGG
ATCGGATACCGCGGAATCATGTGTTTGTGTGCTGCCATTTAAAGAGGGAT
AAGAGGTGTGGGTTGGTGGGCCCTTTTTTGATCAGGGAGTTCAGGAAATT
GATTACGTTACAGCGAGGGAAGGAGGGGGAGAATAACGATGTGTTTGAAT
TTGAGTGTCCGGTACGAGCTTGCAGTCATGTTGGAGGCCATGCGTATGCT
GGGAATGTGATCACATTCAGCAGGAGGGAGAAAGAGGGAGGAGGGAGGAA
GGGAGGGAGGGTAGTGGGGGATTGGTGGGGGTATGTCACGCCGGTGGTTG
TCAAGGATTTAGTGGAGAGACACCTTGTAAAGGGAGAGTTGCTGGAGGGT
GTATGGAGGGGACAGATGGGCTTGGCCGAGGAGGAGCAGAAGCAGGTGGC
ACTGAAGGAGGGGAAGTGCGACGGGTGCGCTTGTGGGGAAAATTCGACGG
CGTCGTAG back to topCoding sequence (CDS) from alignment at scaffold_9:635059..636066- >mRNA_4791 ID=mRNA_4791|Name=jgi.p|Nanoce1779_2|527365|organism=Nannochloropsis oceanica|type=CDS|length=1866bp|location=Sequence derived from alignment at scaffold_9:635059..636066- (Nannochloropsis oceanica)
GGGTAGGTTGGCGGGGATTGAGGGGGTGGATGTGATGGATCGGATACCGC
GGAATCATGTGTTTGTGTGCTGCCATTTAAAGAGGGATAAGAGGTGTGGG
TTGGTGGGCCCTTTTTTGATCAGGGAGTTCAGGAAATTGATTACGTTACA
GCGAGGGAAGGAGGGGGAGAATAACGATGTGTTTGAATTTGAGTGTCCGG
TACGAGCTTGCAGTCATGTTGGAGGCCATGCGTATGCTGGGAATGTGATC
ACATTCAGCAGGAGGGAGAAAGAGGGAGGAGGGAGGAAGGGAGGGAGGGT
AGTGGGGGATTGGTGGGGGTATGTCACGCCGGTGGTTGTCAAGGATTTAG
TGGAGAGACACCTTGTAAAGGGAGAGTTGCTGGAGGGTGTATGGAGGGGA
CAGATGGGCTTGGCCGAGGAGGAGCAGAAGCAGGTGGCACTGAAGGAGGG
GAAGTGCGACGGGTGCGCTTGTGGGGAAAATTCGACGGCGTCGTAGATGG
CAGATGAAGCAGGAAGAGCACTCGGCGTAGCCGTCAAAATCGAGGAGTCA
GACGCAGAGATTCTGGCAAAGCTTGATCCATTGACAGACACAAAATTCGG
CTTGGGGCGCATGGAAATGGGCAGTAAAGAGTGCTTGGCGGGTACGGTGA
AGAAATATGATACGCATGTGTTTGTTTTGTGGAAGAAAGCGACTGATTGG
CCTAAAAATGTGGAGGATGGAGAAAAGGGGAGTATTGCTATAACCCTCCC
TCAGGCCTTGCATGCTGCATTAAAGAAACACGCGGAAGGAATAACAACAG
GCAAGGCTAAGTTGAACGTGGCCGAGTGCAGTGAGGAGGAAGGCGACGAG
GACGGGACTCTGTTGTTGTTCCCCCAGGAATTGTGTATTACCGGAGTGAC
TGTGGAGAATGCCGAGGCTGTGGTGGAAGCTCTGGGTAGGTTGGCGGGGA
TTGAGGGGGTGGATGTGATGGATCGGATACCGCGGAATCATGTGTTTGTG
TGCTGCCATTTAAAGAGGGATAAGAGGTGTGGGTTGGTGGGCCCTTTTTT
GATCAGGGAGTTCAGGAAATTGATTACGTTACAGCGAGGGAAGGAGGGGG
AGAATAACGATGTGTTTGAATTTGAGTGTCCGGTACGAGCTTGCAGTCAT
GTTGGAGGCCATGCGTATGCTGGGAATGTGATCACATTCAGCAGGAGGGA
GAAAGAGGGAGGAGGGAGGAAGGGAGGGAGGGTAGTGGGGGATTGGTGGG
GGTATGTCACGCCGGTGGTTGTCAAGGATTTAGTGGAGAGACACCTTGTA
AAGGGAGAGTTGCTGGAGGGTGTATGGAGGGGACAGATGGGCTTGGCCGA
GGAGGAGCAGAAGCAGGTGGCACTGAAGGAGGGGAAGTGCGACGGGTGCG
CTTGTGGGGAAAATTCGACGGCGTCGTAGATGGCAGATGAAGCAGGAAGA
GCACTCGGCGTAGCCGTCAAAATCGAGGAGTCAGACGCAGAGATTCTGGC
AAAGCTTGATCCATTGACAGACACAAAATTCGGCTTGGGGCGCATGGAAA
TGGGCAGTAAAGAGTGCTTGGCGGGTACGGTGAAGAAATATGATACGCAT
GTGTTTGTTTTGTGGAAGAAAGCGACTGATTGGCCTAAAAATGTGGAGGA
TGGAGAAAAGGGGAGTATTGCTATAACCCTCCCTCAGGCCTTGCATGCTG
CATTAAAGAAACACGCGGAAGGAATAACAACAGGCAAGGCTAAGTTGAAC
GTGGCCGAGTGCAGTGAGGAGGAAGGCGACGAGGACGGGACTCTGTTGTT
GTTCCCCCAGGAATTGTGTATTACCGGAGTGACTGTGGAGAATGCCGAGG
CTGTGGTGGAAGCTCT back to top
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