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Properties
| Property Name | Value |
| TranscriptId | 442917 |
| Track | FilteredModels2 |
| ProteinId | 442831 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| scaffold_9 | supercontig | scaffold_9:596575..599762 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_4770 ID=mRNA_4770|Name=jgi.p|Nanoce1779_2|442831|organism=Nannochloropsis oceanica|type=mRNA|length=3188bp TTTGAGTCGTTCAAAAGTCAAAAGATGAGGACTCAGTTTACCGGGGGTAC CAGATCATAATCATTGCCTTCCCCGCGGCAGATAGTCCCACCTGCGTTCT AAAAAGGCAGAGATGGAACGGATGCGAGTCTTCTAGGTGTGGGATCGTTG CGTCCATGGAGCGTGTTTTGTACGAGCTCTGGCTTTTCCCTCCTTTCCAG CATCACCAGGCCGCCAAAAACTTGTTCTTATCCCATCCACCGCCCTGCGA CCACCATTGCTACGAACGCATGTCCCGCAGACCCTATTGATCACGCTCCT TGCTATCTCCATTCATCATCAAACAGGACAATTGACATCGCGTTTTCCTT TTTGGTGCCGACCCCAGGGAAAAATCCAATCCCCAAATCATCACCAGCAT CACATCCTACGATTGAAAACCAAAAGCTAAGCCACGACAAACATGTCGGA GGTCGAGACCATGCCCATGTCGTCCAGCACAATAGAGGGACAAGATCAGC AACAACAGTGCGAGCACATGAAAGGTAGTGCTGGCCCCGAGCCGGAGCCG TCGTCGACAGCCACCGATGGCGCGGATGCTGCTGCTTCTCCTGCTGCTGC CGATGTTGCGACGGGCGAGGGAAAGCAAGTCGAGGAGGCGGAGGCCCCCG TCGCCACGGAGCGTGATAATCTGTCACTGAAAATCAAGGAGGAAGTGGCC GAGGCAGACGGCAAGGAGCGCAAAGAGGAAGGAAAGGGCGATGTAGAGCA ACCACCACAACAGACACCGCAGCCACCCTCTTCTTCCCCCCAACGCGACG AGAACGAAGTCGAGGACCCAGAAGTAGCCAGCGCCACGAAGAAGGAAGAA GAAGAGAAGCAGGGCCCTCTAAACAACAACGCTCCCTCCGCGGCTATCCC TTCGACAGCAGGCGCCAGCGTGGGGGCCTTGCCGCAACCTCCTCACTCAA TCAGCACGTCGGTCAGCAGCAACAGGGTGGTGGATATAAAACAAAATTGG GAAGACCAACAAGCCCACGCAATAACTATGGCCACCTCTACCACCGCTAA TGCGGTCCAAGCCACGAGTGCGGGCCCTCTCTCCGATGACCGAGGAGGGG GAGGAGGAGGCGGGGAAGGGGGAGGAGAAGCGTCTCCTGCCTCCTCCGCT GGCCTGCAGCAAGCCGCTCAACCATCCTTGCCTCCCGCCCTGGCCATGCC CTACCTTCCTCAGTTTACCGAGATGGATGGGATGGCCCCTGGGTGTAATT GCAAGCGAAGCCGATGCCTTAAGCTCTACTGTCAATGTTTCGCCGCCCAA GCCTGTTGTATCTCGGCGTGCAACTGCCAAGGCTGCCTGAACCTGCCAGC ACACAACCACATCCGCGCGGAGGCCATCCGCCAAATCGTGGAACGGAATC CCAATGCCTTTCAGACCAAGTTTCGCCCCGATGGCGAAGACGCCGTCCAC AAGCTCGGCTGCAAATGTCGGAAATCCGCGTGTCTGAAAAAGTACTGCGA ATGCTTCAATGCGGGCGCCCGCTGCTCCGACAAGTGCTCCTGTATCAACT GCCAGAATGTAGCTGGCATTGGTCGTCCCTACGAAGAAGCAGTGATGGCT GCCCGTCGGGGAGCAACAGCGGCAAGACAAGCAGCCCAAGTGGCAGGACA GAACCCGGCCTTGGCTACACCGCAACCGCACATGATGGCCTCCATGGTAG CGGCGGCCCTGCGGCAGCAGCAGCCATACCACCAGCTGATTGGAGGTGGA GCGATAAAAGAGGAAGGTGTTGGGGGAAGAGGCTTGGGGGGGGGGTCGCC GGCGCACAAGAGAAAGAGGAGCGGGAGTAGTGGGGAGGTAGGGGTGGGAG GAGAAGGAGGAGGAGAAGGCGGAGGGGATGAGCAACACCAGCTCCATCGT CCCCCCATTATGTCCCCTATCTCCACAGGACTACGTGCTTCTCCTTCGCA GCAACAGCAGCAACAAACACCAGCAGCCGCGGCTGCCGCTGCTGCGGCAG CCGCGGCTGCGGCGCAAGCACAGGAGTTTGCGAGTCAGGGCTTGTTCGGG ATTCCTGGGCACCCTGGCTTCCTTCCCTTCCTCCCCCCCGGCCAACCAGC GGCTTTCTACGAGCAACAGGCCGCGCTTATGGCATCGCAAACATTGCAGC AGCAGCAGCAACAGCTGGAGTTCATCCAGCGGCAGCAGCAAGCTCAATTT CAGTTGTTCCAGCAGCAGTACCAGCAGCAGCAGCAGCAGAACCAGCGGCA GCACCACCAGCAGGCTATGCAGCAGTCTTTGTCCCCTACCCAGCTCCTAC TCCTCCAGGCACAGCAACAACACCAATATTTCCAGCAGCAGCAGTTGCAT CAGCAGCATCAACAGCAAATGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA GCAACAACGGCAACAGGCAGGAAGGGGAGGAGGGAGGGGGGGAGGGAAAA AGTCCGCCGAGGCGCCAGGAGGGGACGACCTTGAAGAGATGGTGCAAGCA GCGGAAGACTTGGCATTCTTGAAAGGGTCGAGTGGTCCGGGAAGTAAAGG CCATGCAGAAGTGGAGGCACAACTCAACCAAGCCAACCACCAGCAGCAGC AACAGGCAGCGCTGCAGCAACAACAACTCATGGCCGCAGCGGTCGCGCTG GCCTCGGCGCAAGGCGGTGGCGGAGGGGGAGGAGAAGGAGGAGGAGGAGG AGGGGGAGGAGGAAGGCCGGAACAGCAACTTTATGCGCAGCAGTTCATGG GACATCCGGCTTTTGCTGCTATGGCCATGCAGCAACAGCTGGATCCCGCT CAGGCGGCGGCAGTTTATGCACAAATGCAGCAGCAGATGCAGGAACAGCA GAAACAGCAGCAACAGCAACAACAACAACAAGTTGGTGGTGGAAGAGGAG GAGGAGGAGGAGGAGAGGGAGGGGAGGGAGGATTAGGACAGCATGAGTCG GTGTGACGGAGGAGGGATGAAAGGATGTAGAGAGGGATGGAGAGCAAGAA TGAATGACGAGTATTGTTTTCAAAGAGGTAGGTCGGAGACATAGAGCAAA GCTCGGTCCCACAGAAGGCGAAACGGGAGGGAGGAAAGTTTAAAGAGGGC TCGGCGGCGTCGGTCGTGCAGGGAGGGGATAAGGAGTCAAAATGGAAAGC CTGGAGAAACGCCAAGAAATAAAGTCCTTTGAGACGAT back to topprotein sequence of jgi.p|Nanoce1779_2|442831 >mRNA_4770-protein ID=mRNA_4770-protein|Name=jgi.p|Nanoce1779_2|442831|organism=Nannochloropsis oceanica|type=polypeptide|length=838bp MSEVETMPMSSSTIEGQDQQQQCEHMKGSAGPEPEPSSTATDGADAAASP AAADVATGEGKQVEEAEAPVATERDNLSLKIKEEVAEADGKERKEEGKGD VEQPPQQTPQPPSSSPQRDENEVEDPEVASATKKEEEEKQGPLNNNAPSA AIPSTAGASVGALPQPPHSISTSVSSNRVVDIKQNWEDQQAHAITMATST TANAVQATSAGPLSDDRGGGGGGGEGGGEASPASSAGLQQAAQPSLPPAL AMPYLPQFTEMDGMAPGCNCKRSRCLKLYCQCFAAQACCISACNCQGCLN LPAHNHIRAEAIRQIVERNPNAFQTKFRPDGEDAVHKLGCKCRKSACLKK YCECFNAGARCSDKCSCINCQNVAGIGRPYEEAVMAARRGATAARQAAQV AGQNPALATPQPHMMASMVAAALRQQQPYHQLIGGGAIKEEGVGGRGLGG GSPAHKRKRSGSSGEVGVGGEGGGEGGGDEQHQLHRPPIMSPISTGLRAS PSQQQQQQTPAAAAAAAAAAAAAAQAQEFASQGLFGIPGHPGFLPFLPPG QPAAFYEQQAALMASQTLQQQQQQLEFIQRQQQAQFQLFQQQYQQQQQQN QRQHHQQAMQQSLSPTQLLLLQAQQQHQYFQQQQLHQQHQQQMQQQQQQQ QQQQQRQQAGRGGGRGGGKKSAEAPGGDDLEEMVQAAEDLAFLKGSSGPG SKGHAEVEAQLNQANHQQQQQAALQQQQLMAAAVALASAQGGGGGGGEGG GGGGGGGRPEQQLYAQQFMGHPAFAAMAMQQQLDPAQAAAVYAQMQQQMQ EQQKQQQQQQQQQVGGGRGGGGGGEGGEGGLGQHESV* back to topmRNA from alignment at scaffold_9:596575..599762+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_4770 ID=mRNA_4770|Name=jgi.p|Nanoce1779_2|442831|organism=Nannochloropsis oceanica|type=mRNA|length=3188bp|location=Sequence derived from alignment at scaffold_9:596575..599762+ (Nannochloropsis oceanica) TTTGAGTCGTTCAAAAGTCAAAAGATGAGGACTCAGTTTACCGGGGGTAC
CAGATCATAATCATTGCCTTCCCCGCGGCAGATAGTCCCACCTGCGTTCT
AAAAAGGCAGAGATGGAACGGATGCGAGTCTTCTAGGTGTGGGATCGTTG
CGTCCATGGAGCGTGTTTTGTACGAGCTCTGGCTTTTCCCTCCTTTCCAG
CATCACCAGGCCGCCAAAAACTTGTTCTTATCCCATCCACCGCCCTGCGA
CCACCATTGCTACGAACGCATGTCCCGCAGACCCTATTGATCACGCTCCT
TGCTATCTCCATTCATCATCAAACAGGACAATTGACATCGCGTTTTCCTT
TTTGGTGCCGACCCCAGGGAAAAATCCAATCCCCAAATCATCACCAGCAT
CACATCCTACGATTGAAAACCAAAAGCTAAGCCACGACAAACATGTCGGA
GGTCGAGACCATGCCCATGTCGTCCAGCACAATAGAGGGACAAGATCAGC
AACAACAGTGCGAGCACATGAAAGGTAGTGCTGGCCCCGAGCCGGAGCCG
TCGTCGACAGCCACCGATGGCGCGGATGCTGCTGCTTCTCCTGCTGCTGC
CGATGTTGCGACGGGCGAGGGAAAGCAAGTCGAGGAGGCGGAGGCCCCCG
TCGCCACGGAGCGTGATAATCTGTCACTGAAAATCAAGGAGGAAGTGGCC
GAGGCAGACGGCAAGGAGCGCAAAGAGGAAGGAAAGGGCGATGTAGAGCA
ACCACCACAACAGACACCGCAGCCACCCTCTTCTTCCCCCCAACGCGACG
AGAACGAAGTCGAGGACCCAGAAGTAGCCAGCGCCACGAAGAAGGAAGAA
GAAGAGAAGCAGGGCCCTCTAAACAACAACGCTCCCTCCGCGGCTATCCC
TTCGACAGCAGGCGCCAGCGTGGGGGCCTTGCCGCAACCTCCTCACTCAA
TCAGCACGTCGGTCAGCAGCAACAGGGTGGTGGATATAAAACAAAATTGG
GAAGACCAACAAGCCCACGCAATAACTATGGCCACCTCTACCACCGCTAA
TGCGGTCCAAGCCACGAGTGCGGGCCCTCTCTCCGATGACCGAGGAGGGG
GAGGAGGAGGCGGGGAAGGGGGAGGAGAAGCGTCTCCTGCCTCCTCCGCT
GGCCTGCAGCAAGCCGCTCAACCATCCTTGCCTCCCGCCCTGGCCATGCC
CTACCTTCCTCAGTTTACCGAGATGGATGGGATGGCCCCTGGGTGTAATT
GCAAGCGAAGCCGATGCCTTAAGCTCTACTGTCAATGTTTCGCCGCCCAA
GCCTGTTGTATCTCGGCGTGCAACTGCCAAGGCTGCCTGAACCTGCCAGC
ACACAACCACATCCGCGCGGAGGCCATCCGCCAAATCGTGGAACGGAATC
CCAATGCCTTTCAGACCAAGTTTCGCCCCGATGGCGAAGACGCCGTCCAC
AAGCTCGGCTGCAAATGTCGGAAATCCGCGTGTCTGAAAAAGTACTGCGA
ATGCTTCAATGCGGGCGCCCGCTGCTCCGACAAGTGCTCCTGTATCAACT
GCCAGAATGTAGCTGGCATTGGTCGTCCCTACGAAGAAGCAGTGATGGCT
GCCCGTCGGGGAGCAACAGCGGCAAGACAAGCAGCCCAAGTGGCAGGACA
GAACCCGGCCTTGGCTACACCGCAACCGCACATGATGGCCTCCATGGTAG
CGGCGGCCCTGCGGCAGCAGCAGCCATACCACCAGCTGATTGGAGGTGGA
GCGATAAAAGAGGAAGGTGTTGGGGGAAGAGGCTTGGGGGGGGGGTCGCC
GGCGCACAAGAGAAAGAGGAGCGGGAGTAGTGGGGAGGTAGGGGTGGGAG
GAGAAGGAGGAGGAGAAGGCGGAGGGGATGAGCAACACCAGCTCCATCGT
CCCCCCATTATGTCCCCTATCTCCACAGGACTACGTGCTTCTCCTTCGCA
GCAACAGCAGCAACAAACACCAGCAGCCGCGGCTGCCGCTGCTGCGGCAG
CCGCGGCTGCGGCGCAAGCACAGGAGTTTGCGAGTCAGGGCTTGTTCGGG
ATTCCTGGGCACCCTGGCTTCCTTCCCTTCCTCCCCCCCGGCCAACCAGC
GGCTTTCTACGAGCAACAGGCCGCGCTTATGGCATCGCAAACATTGCAGC
AGCAGCAGCAACAGCTGGAGTTCATCCAGCGGCAGCAGCAAGCTCAATTT
CAGTTGTTCCAGCAGCAGTACCAGCAGCAGCAGCAGCAGAACCAGCGGCA
GCACCACCAGCAGGCTATGCAGCAGTCTTTGTCCCCTACCCAGCTCCTAC
TCCTCCAGGCACAGCAACAACACCAATATTTCCAGCAGCAGCAGTTGCAT
CAGCAGCATCAACAGCAAATGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
GCAACAACGGCAACAGGCAGGAAGGGGAGGAGGGAGGGGGGGAGGGAAAA
AGTCCGCCGAGGCGCCAGGAGGGGACGACCTTGAAGAGATGGTGCAAGCA
GCGGAAGACTTGGCATTCTTGAAAGGGTCGAGTGGTCCGGGAAGTAAAGG
CCATGCAGAAGTGGAGGCACAACTCAACCAAGCCAACCACCAGCAGCAGC
AACAGGCAGCGCTGCAGCAACAACAACTCATGGCCGCAGCGGTCGCGCTG
GCCTCGGCGCAAGGCGGTGGCGGAGGGGGAGGAGAAGGAGGAGGAGGAGG
AGGGGGAGGAGGAAGGCCGGAACAGCAACTTTATGCGCAGCAGTTCATGG
GACATCCGGCTTTTGCTGCTATGGCCATGCAGCAACAGCTGGATCCCGCT
CAGGCGGCGGCAGTTTATGCACAAATGCAGCAGCAGATGCAGGAACAGCA
GAAACAGCAGCAACAGCAACAACAACAACAAGTTGGTGGTGGAAGAGGAG
GAGGAGGAGGAGGAGAGGGAGGGGAGGGAGGATTAGGACAGCATGAGTCG
GTGTGACGGAGGAGGGATGAAAGGATGTAGAGAGGGATGGAGAGCAAGAA
TGAATGACGAGTATTGTTTTCAAAGAGGTAGGTCGGAGACATAGAGCAAA
GCTCGGTCCCACAGAAGGCGAAACGGGAGGGAGGAAAGTTTAAAGAGGGC
TCGGCGGCGTCGGTCGTGCAGGGAGGGGATAAGGAGTCAAAATGGAAAGC
CTGGAGAAACGCCAAGAAATAAAGTCCTTTGAGACGAT back to topCoding sequence (CDS) from alignment at scaffold_9:596575..599762+ >mRNA_4770 ID=mRNA_4770|Name=jgi.p|Nanoce1779_2|442831|organism=Nannochloropsis oceanica|type=CDS|length=2514bp|location=Sequence derived from alignment at scaffold_9:596575..599762+ (Nannochloropsis oceanica) ATGTCGGAGGTCGAGACCATGCCCATGTCGTCCAGCACAATAGAGGGACA AGATCAGCAACAACAGTGCGAGCACATGAAAGGTAGTGCTGGCCCCGAGC CGGAGCCGTCGTCGACAGCCACCGATGGCGCGGATGCTGCTGCTTCTCCT GCTGCTGCCGATGTTGCGACGGGCGAGGGAAAGCAAGTCGAGGAGGCGGA GGCCCCCGTCGCCACGGAGCGTGATAATCTGTCACTGAAAATCAAGGAGG AAGTGGCCGAGGCAGACGGCAAGGAGCGCAAAGAGGAAGGAAAGGGCGAT GTAGAGCAACCACCACAACAGACACCGCAGCCACCCTCTTCTTCCCCCCA ACGCGACGAGAACGAAGTCGAGGACCCAGAAGTAGCCAGCGCCACGAAGA AGGAAGAAGAAGAGAAGCAGGGCCCTCTAAACAACAACGCTCCCTCCGCG GCTATCCCTTCGACAGCAGGCGCCAGCGTGGGGGCCTTGCCGCAACCTCC TCACTCAATCAGCACGTCGGTCAGCAGCAACAGGGTGGTGGATATAAAAC AAAATTGGGAAGACCAACAAGCCCACGCAATAACTATGGCCACCTCTACC ACCGCTAATGCGGTCCAAGCCACGAGTGCGGGCCCTCTCTCCGATGACCG AGGAGGGGGAGGAGGAGGCGGGGAAGGGGGAGGAGAAGCGTCTCCTGCCT CCTCCGCTGGCCTGCAGCAAGCCGCTCAACCATCCTTGCCTCCCGCCCTG GCCATGCCCTACCTTCCTCAGTTTACCGAGATGGATGGGATGGCCCCTGG GTGTAATTGCAAGCGAAGCCGATGCCTTAAGCTCTACTGTCAATGTTTCG CCGCCCAAGCCTGTTGTATCTCGGCGTGCAACTGCCAAGGCTGCCTGAAC CTGCCAGCACACAACCACATCCGCGCGGAGGCCATCCGCCAAATCGTGGA ACGGAATCCCAATGCCTTTCAGACCAAGTTTCGCCCCGATGGCGAAGACG CCGTCCACAAGCTCGGCTGCAAATGTCGGAAATCCGCGTGTCTGAAAAAG TACTGCGAATGCTTCAATGCGGGCGCCCGCTGCTCCGACAAGTGCTCCTG TATCAACTGCCAGAATGTAGCTGGCATTGGTCGTCCCTACGAAGAAGCAG TGATGGCTGCCCGTCGGGGAGCAACAGCGGCAAGACAAGCAGCCCAAGTG GCAGGACAGAACCCGGCCTTGGCTACACCGCAACCGCACATGATGGCCTC CATGGTAGCGGCGGCCCTGCGGCAGCAGCAGCCATACCACCAGCTGATTG GAGGTGGAGCGATAAAAGAGGAAGGTGTTGGGGGAAGAGGCTTGGGGGGG GGGTCGCCGGCGCACAAGAGAAAGAGGAGCGGGAGTAGTGGGGAGGTAGG GGTGGGAGGAGAAGGAGGAGGAGAAGGCGGAGGGGATGAGCAACACCAGC TCCATCGTCCCCCCATTATGTCCCCTATCTCCACAGGACTACGTGCTTCT CCTTCGCAGCAACAGCAGCAACAAACACCAGCAGCCGCGGCTGCCGCTGC TGCGGCAGCCGCGGCTGCGGCGCAAGCACAGGAGTTTGCGAGTCAGGGCT TGTTCGGGATTCCTGGGCACCCTGGCTTCCTTCCCTTCCTCCCCCCCGGC CAACCAGCGGCTTTCTACGAGCAACAGGCCGCGCTTATGGCATCGCAAAC ATTGCAGCAGCAGCAGCAACAGCTGGAGTTCATCCAGCGGCAGCAGCAAG CTCAATTTCAGTTGTTCCAGCAGCAGTACCAGCAGCAGCAGCAGCAGAAC CAGCGGCAGCACCACCAGCAGGCTATGCAGCAGTCTTTGTCCCCTACCCA GCTCCTACTCCTCCAGGCACAGCAACAACACCAATATTTCCAGCAGCAGC AGTTGCATCAGCAGCATCAACAGCAAATGCAGCAGCAGCAGCAGCAGCAG CAGCAGCAGCAACAACGGCAACAGGCAGGAAGGGGAGGAGGGAGGGGGGG AGGGAAAAAGTCCGCCGAGGCGCCAGGAGGGGACGACCTTGAAGAGATGG TGCAAGCAGCGGAAGACTTGGCATTCTTGAAAGGGTCGAGTGGTCCGGGA AGTAAAGGCCATGCAGAAGTGGAGGCACAACTCAACCAAGCCAACCACCA GCAGCAGCAACAGGCAGCGCTGCAGCAACAACAACTCATGGCCGCAGCGG TCGCGCTGGCCTCGGCGCAAGGCGGTGGCGGAGGGGGAGGAGAAGGAGGA GGAGGAGGAGGGGGAGGAGGAAGGCCGGAACAGCAACTTTATGCGCAGCA GTTCATGGGACATCCGGCTTTTGCTGCTATGGCCATGCAGCAACAGCTGG ATCCCGCTCAGGCGGCGGCAGTTTATGCACAAATGCAGCAGCAGATGCAG GAACAGCAGAAACAGCAGCAACAGCAACAACAACAACAAGTTGGTGGTGG AAGAGGAGGAGGAGGAGGAGGAGAGGGAGGGGAGGGAGGATTAGGACAGC ATGAGTCGGTGTGA back to top
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