jgi.p|Nanoce1779_2|527427, mRNA_4767 (mRNA) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|527427
Unique NamemRNA_4767
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length432
Alignment locationscaffold_9:591246..591677 +

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Properties
Property NameValue
TranscriptId527513
TrackFilteredModels2
ProteinId527427
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_9supercontigscaffold_9:591246..591677 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|527427gene_4767Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|527427mRNA_4767-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS_4767CDS_4767Nannochloropsis oceanica (N. oceanica CCMP1779)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>mRNA_4767 ID=mRNA_4767|Name=jgi.p|Nanoce1779_2|527427|organism=Nannochloropsis oceanica|type=mRNA|length=432bp
ATGGTCGTTGCGGATTTACTGAAAATCTGGTTAAGGCATCTAAGTGAGCC
GTTAATACCGATGCGGTTGTACCGGGCAGCACTGGATGCAGGGCAGGCGA
AAGACATTAAGCCAGTGGTGACTTTACTCAATGAAATGCTACCGCCCGCG
AATGCGGCGACATTGGTATATCTTATGCATTTTTTGAATCACTGCGCGGA
GCTGAGTCAATTCAATCAGATGACGTTAACCAACCTTGCGATTGTGTTTT
CGCCGAATTTGCTCAGGCATCCAAGTAATGACCCGATGTTGATGGTCCAG
AATGCGGAAAATGAACGGAAATTTGTAATTCAGTTAATGCAGGCCGTTGC
AAGTCCTATGTCTCCTTCTCATGCTCTTCCAAGAGAGGAGGGACGCGGCC
GCGGAGAAAGTGGCCAAGGGCAATTAGTGTGA
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protein sequence of jgi.p|Nanoce1779_2|527427

>mRNA_4767-protein ID=mRNA_4767-protein|Name=jgi.p|Nanoce1779_2|527427|organism=Nannochloropsis oceanica|type=polypeptide|length=144bp
MVVADLLKIWLRHLSEPLIPMRLYRAALDAGQAKDIKPVVTLLNEMLPPA
NAATLVYLMHFLNHCAELSQFNQMTLTNLAIVFSPNLLRHPSNDPMLMVQ
NAENERKFVIQLMQAVASPMSPSHALPREEGRGRGESGQGQLV*
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mRNA from alignment at scaffold_9:591246..591677+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_4767 ID=mRNA_4767|Name=jgi.p|Nanoce1779_2|527427|organism=Nannochloropsis oceanica|type=mRNA|length=432bp|location=Sequence derived from alignment at scaffold_9:591246..591677+ (Nannochloropsis oceanica)
ATGGTCGTTGCGGATTTACTGAAAATCTGGTTAAGGCATCTAAGTGAGCC
GTTAATACCGATGCGGTTGTACCGGGCAGCACTGGATGCAGGGCAGGCGA
AAGACATTAAGCCAGTGGTGACTTTACTCAATGAAATGCTACCGCCCGCG
AATGCGGCGACATTGGTATATCTTATGCATTTTTTGAATCACTGCGCGGA
GCTGAGTCAATTCAATCAGATGACGTTAACCAACCTTGCGATTGTGTTTT
CGCCGAATTTGCTCAGGCATCCAAGTAATGACCCGATGTTGATGGTCCAG
AATGCGGAAAATGAACGGAAATTTGTAATTCAGTTAATGCAGGCCGTTGC
AAGTCCTATGTCTCCTTCTCATGCTCTTCCAAGAGAGGAGGGACGCGGCC
GCGGAGAAAGTGGCCAAGGGCAATTAGTGTGA
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Coding sequence (CDS) from alignment at scaffold_9:591246..591677+

>mRNA_4767 ID=mRNA_4767|Name=jgi.p|Nanoce1779_2|527427|organism=Nannochloropsis oceanica|type=CDS|length=432bp|location=Sequence derived from alignment at scaffold_9:591246..591677+ (Nannochloropsis oceanica)
ATGGTCGTTGCGGATTTACTGAAAATCTGGTTAAGGCATCTAAGTGAGCC
GTTAATACCGATGCGGTTGTACCGGGCAGCACTGGATGCAGGGCAGGCGA
AAGACATTAAGCCAGTGGTGACTTTACTCAATGAAATGCTACCGCCCGCG
AATGCGGCGACATTGGTATATCTTATGCATTTTTTGAATCACTGCGCGGA
GCTGAGTCAATTCAATCAGATGACGTTAACCAACCTTGCGATTGTGTTTT
CGCCGAATTTGCTCAGGCATCCAAGTAATGACCCGATGTTGATGGTCCAG
AATGCGGAAAATGAACGGAAATTTGTAATTCAGTTAATGCAGGCCGTTGC
AAGTCCTATGTCTCCTTCTCATGCTCTTCCAAGAGAGGAGGGACGCGGCC
GCGGAGAAAGTGGCCAAGGGCAATTAGTGTGA
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Synonyms
Publications