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Properties
| Property Name | Value |
|---|
| TranscriptId | 442652 |
| Track | FilteredModels2 |
| ProteinId | 442566 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_9 | supercontig | scaffold_9:575097..576698 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_4760 ID=mRNA_4760|Name=jgi.p|Nanoce1779_2|442566|organism=Nannochloropsis oceanica|type=mRNA|length=552bp
TTAAATTCTGCACTAAGTCATCCTCCTCCTGTCATCAAGGACCCCACGCT
GTAGATAAAAGGAATTGCTTTCTTAAGCATCGGTCGGGCATCATGATGCA
TTTCCCACACATTTCGAAATCGAAAAGATACCCAGGCCCAGAGTGTCAGC
GGCAGGAGCAGGAGCAGCCAGGCAAGATGGGCGACAACAACGACGACGAG
AGGGGCAGGAGAGGCATCCGATGGGATGAGGAAACGATTGCGGAGCACGA
TAAGCTTCGTGGGACCCGACAAAAGATCGATGAACCCCCTACGCCGTACC
ACGTGTCCTACGAGCCAGCCGACGCCGAAGACAGCAATATGGACATTGTC
CTCCTCCTCTGCCTCTGGAAGTGGAGGGGGGGAGTCGTTCTCGCCATCTA
TGTCCAGGAGTGGCAGCTCAAGCAATAGCAGTAGGAGGGAGAGGGCAACC
AGTTTTTCGTCTGACTCGGACATCGAGAGATTGGCAGAGGAGAAAAGGAT
AAAGTGTCCCGAGCATAAGGCATTTGCCCAGAAGAGGATGGAGGGGAAGG
GA back to topprotein sequence of jgi.p|Nanoce1779_2|442566 >mRNA_4760-protein ID=mRNA_4760-protein|Name=jgi.p|Nanoce1779_2|442566|organism=Nannochloropsis oceanica|type=polypeptide|length=112bp
MMHFPHISKSKRYPGPECQRQEQEQPGKMGDNNDDERGRRGIRWDEETIA
EHDKLRGTRQKIDEPPTPYHVSYEPADAEDSNMDIVLLLCLWKWRGGVVL
AIYVQEWQLKQ* back to topmRNA from alignment at scaffold_9:575097..576698+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_4760 ID=mRNA_4760|Name=jgi.p|Nanoce1779_2|442566|organism=Nannochloropsis oceanica|type=mRNA|length=1602bp|location=Sequence derived from alignment at scaffold_9:575097..576698+ (Nannochloropsis oceanica)
TTAAATTCTGCACTAAGTCATCCTCCTCCTGTCATCAAGGACCCCACGCT
GTAGATAAAAGGAATTGCTTTCTTAAGCATCGGTCGGGCATCATGATGCA
TTTCCCACACATTTCGAAATCGAAAAGGTAGGAGCAGCAATACGGTTCGC
CACCTAATATGTCCCGTGGACACGTGATTTCACATCACGTGAATGTTCCC
CGCAAGAGGACATTCTGTGGTGCTTGCCTCCATTGAACCTGTGGACAGGC
GTCGTGTTGTACTGGGACGCTCGGAAAGAGCGTCCTCTTTTTCACAATGC
CGTGCCGTGCAGGTTTCGTATTTTTGGGTCCAAAGATGCACCATTTACCA
CTTCCCCATTCCTCCTTCAAGATACCCAGGCCCAGAGTGTCAGCGGCAGG
AGCAGGAGCAGCCAGGCAAGATGGGCGACAACAACGACGACGAGAGGGGC
AGGAGAGGGTACGTGTGATAGGCACGATGGCTGGGAGGGGTGGATTGACC
GACTACATGAGTGAGGCACGACGTAGTGGGCAAATGCGGATCGATTTCCT
TTAGCGTGAGCCCCTGTCAATCATACACCAGCACCACACTTTCCCATTCC
TTATCTTCCAAGTAGCATCCGATGGGATGAGGAAACGATTGCGGAGCACG
ATAAGCTTCGTGGGACCCGACAAAAGGTATGTTGTCCTGCCCTCTTCAGA
TTCCTGTCGATGTGTCTTGATGTTGACGCTATACACCCATGTCCTCTATT
TGTGCTGTATCGACGCGTATGCGTGATCGCACTCTTACCTTTTTCGTCTT
TCTGTACTCCACGCGCTCATTTAAACTACTCCAATTCATGGACACCATCA
TCTCAACCTCCCTACCCACCTCCCCACCTACCCCCACCACAGATCGATGA
ACCCCCTACGCCGTACCACGTGTCCTACGAGCCAGCCGACGCCGAAGACA
GCAATATGGACATTGGTATTCCTGATGGAGGAGGAAGAGGGGGACGTCAA
GGGAGCTACGGCACCGAAAGCATCAGCAGCAGCTACGGTGGCAACGACGT
TGGGGGCCCTTTCGACCAACACCGAGTGTCCCGCTCGGGGTCTGTGTGTT
CGGGTCCCGACACGCCGGGCGATGCTGCGAAGAAAACACAACCTAGTTAT
CTTGCTGAGAACTGGCAAGCCCTTACAACAGCCCTAGAGCAAGCGGCCCG
GAACCGCGAAGCCTTAATCTCCCGCTCTTCCTCCTCCTCCTCTGCCTCTG
GAAGTGGAGGGGGGGAGTCGTTCTCGCCATCTATGTCCAGGAGTGGCAGC
TCAAGCAATAGCAGTAGGAGGGAGAGGGCAACCAGTTTTTCGTCTGACTC
GGACATCGAGAGATTGGCAGAGGAGAAAAGGATAAAGTGTCCCGAGCATA
AGGCATTTGCCCAGAAGAGGTTGAGTCATTATGATGAGTATAAGAGGCTG
CAGGAGTGGAGGCAGGCGCATGAGAAAGAGGAGGAGGAGGAGGAGGAGGA
GGAGGAAGAAGAAGAGGGAAGGGAGGAGGGACGGGATGCATAGGAGAAGG
GACCGAGGGAGGGAGATGAGTGATGAAAAGGCAGAGGATGGAGGGGAAGG
GA back to topCoding sequence (CDS) from alignment at scaffold_9:575097..576698+ >mRNA_4760 ID=mRNA_4760|Name=jgi.p|Nanoce1779_2|442566|organism=Nannochloropsis oceanica|type=CDS|length=1680bp|location=Sequence derived from alignment at scaffold_9:575097..576698+ (Nannochloropsis oceanica)
ATGATGCATTTCCCACACATTTCGAAATCGAAAAGATACCCAGGCCCAGA
GTGTCAGCGGCAGGAGCAGGAGCAGCCAGGCAAGATGGGCGACAACAACG
ACGACGAGAGGGGCAGGAGAGGCATCCGATGGGATGAGGAAACGATTGCG
GAGCACGATAAGCTTCGTGGGACCCGACAAAAGATCGATGAACCCCCTAC
GCCGTACCACGTGTCCTACGAGCCAGCCGACGCCGAAGACAGCAATATGG
ACATTGTCCTCCTCCTCTGCCTCTGGAAGTGGAGGGGGGGAGTCGTTCTC
GCCATCTATGTCCAGGAGTGGCAGCTCAAGCAATAGATGATGCATTTCCC
ACACATTTCGAAATCGAAAAGATACCCAGGCCCAGAGTGTCAGCGGCAGG
AGCAGGAGCAGCCAGGCAAGATGGGCGACAACAACGACGACGAGAGGGGC
AGGAGAGGCATCCGATGGGATGAGGAAACGATTGCGGAGCACGATAAGCT
TCGTGGGACCCGACAAAAGATCGATGAACCCCCTACGCCGTACCACGTGT
CCTACGAGCCAGCCGACGCCGAAGACAGCAATATGGACATTGTCCTCCTC
CTCTGCCTCTGGAAGTGGAGGGGGGGAGTCGTTCTCGCCATCTATGTCCA
GGAGTGGCAGCTCAAGCAATAGATGATGCATTTCCCACACATTTCGAAAT
CGAAAAGATACCCAGGCCCAGAGTGTCAGCGGCAGGAGCAGGAGCAGCCA
GGCAAGATGGGCGACAACAACGACGACGAGAGGGGCAGGAGAGGCATCCG
ATGGGATGAGGAAACGATTGCGGAGCACGATAAGCTTCGTGGGACCCGAC
AAAAGATCGATGAACCCCCTACGCCGTACCACGTGTCCTACGAGCCAGCC
GACGCCGAAGACAGCAATATGGACATTGTCCTCCTCCTCTGCCTCTGGAA
GTGGAGGGGGGGAGTCGTTCTCGCCATCTATGTCCAGGAGTGGCAGCTCA
AGCAATAGATGATGCATTTCCCACACATTTCGAAATCGAAAAGATACCCA
GGCCCAGAGTGTCAGCGGCAGGAGCAGGAGCAGCCAGGCAAGATGGGCGA
CAACAACGACGACGAGAGGGGCAGGAGAGGCATCCGATGGGATGAGGAAA
CGATTGCGGAGCACGATAAGCTTCGTGGGACCCGACAAAAGATCGATGAA
CCCCCTACGCCGTACCACGTGTCCTACGAGCCAGCCGACGCCGAAGACAG
CAATATGGACATTGTCCTCCTCCTCTGCCTCTGGAAGTGGAGGGGGGGAG
TCGTTCTCGCCATCTATGTCCAGGAGTGGCAGCTCAAGCAATAGATGATG
CATTTCCCACACATTTCGAAATCGAAAAGATACCCAGGCCCAGAGTGTCA
GCGGCAGGAGCAGGAGCAGCCAGGCAAGATGGGCGACAACAACGACGACG
AGAGGGGCAGGAGAGGCATCCGATGGGATGAGGAAACGATTGCGGAGCAC
GATAAGCTTCGTGGGACCCGACAAAAGATCGATGAACCCCCTACGCCGTA
CCACGTGTCCTACGAGCCAGCCGACGCCGAAGACAGCAATATGGACATTG
TCCTCCTCCTCTGCCTCTGGAAGTGGAGGGGGGGAGTCGTTCTCGCCATC
TATGTCCAGGAGTGGCAGCTCAAGCAATAG back to top
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