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Properties
| Property Name | Value |
|---|
| TranscriptId | 587825 |
| Track | FilteredModels2 |
| ProteinId | 587739 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_9 | supercontig | scaffold_9:530762..533474 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_4745 ID=mRNA_4745|Name=jgi.p|Nanoce1779_2|587739|organism=Nannochloropsis oceanica|type=mRNA|length=2414bp
ACAGGTGACCCGCTTTCTCCTGTGCCTTCGTCTCCTCCACTACTGCTGCT
TGGGAGACAAGAGGTCGACTTGAGCCCTAACTGTGCAATTATTGAGTGTG
ACGTGCACGGGGCGAGTACCAAGTGAAGCAAAACACCACCATGGCGTCAC
GTACCCCTAGAAGGGCAGCCTCAAGATTAATTAGATGTGTAGGGGTTGTA
TTGTTTTTCGTGTTTATGCAGATAGTGATGGCGTCGGCATTGCAAGATCA
CACAGATCTAAGGCAAAGGACAAGCACATTGGGCAAAGTCTCACGATCGC
ACATTACAGAAGCAGTATCATCATCATTTCTATTATCTCTACCGGCAGCA
ACAGCAGCTGTAGGGGCAACACAGGTCTTCCCTCTCTTGCGCCGCCGAGG
GGGCGCCTGGGACTTTATCAGAAGAGAAAAGATCGGCACAGCCAAGGCGC
TCGCCAAGCCAAAGCCTGCCAAGAAGGGTGCAGTCAACAGCAACAGCAAA
AGCAGCAGCATCAGTAGTAGCAGCAGCAGCAGCGCCACCACTACTAAGGC
CGGCAAACCCAAGAGACCGAAAGCAGCGCTCTTAACCCGGAAGGAAGCCC
CCAAGTTTTTCGCGTTAAGCCTGATGATGTTCTGCATCATCTACGTTTTC
ACCATGACCCGCGACACAAAAGACACCCTCATTGTTTCTTATTGTGGGGC
GGAGGCCATCGCTTTCCTGAAAGTTTACGGCGTCGTTCCCGCCGCCATGG
CCTTCATGGTGGGGTACTCCTGGGCTGCGAACCACCTGTCAAAGCGCTCC
TTATTCTACGTGACCATCGTCCCGTTCTTCGCATTTTATGCGCTTTTTGC
CTACGTGCTGTACCCGAACCGTCATAACCTCCACCTAGAGCAACTCGCCC
CTATTGCCGGTGCTAGTCTCCCCTACGTTCGCAATCTGTTTCGGTACTGG
ATCTTTTCGATTTATTACATCACTTCCGAGTTATGGGGCTCGGCAGGAGT
GCCCTTGTTGTTTTGGCAGTGTGCGAATGACGTGACCCCCATTGATCAAG
CCAAGAGGTTCTATCCCCTTTTTGCCGTTTTGGGAAATATGGCTCCGATC
GTCTCGGGACAGACCACAGCGTTCGTGAGCAAGTGGATCAAGAAACTGCA
TCCGCACGACGAGCATCTCGCTTTTGAAAACACGTTGAAGGTGTTGACTT
CCTTCATGATGGCCGCCGGCGGGATCGTCATGGCGCTCTACTGGTATGTG
ATGGACGTCAGCTCCGCGCAAGCCGCCCAAGCCCAAGCCATGCTCTCCAA
GTCGGCCTTGAAGAAACAATCCATCGCGATTGAGCACAGCAGTAAGAAGG
CGAAGCCCGGCTTGCTTGAAAGTATGAAGATTCTTTCAAAATCTCGTTGG
TTGGAATGCATTGCCGTCATGGTCGTCTCGTACGGCCTGACCATGGAATT
TACGGAAATCATTTGGAAGGCGACGGTGAAAATGGCATTTCCCAACAAGC
AGGACTACATGGAGTTCATGGGGAATTACTCCACTGTTGTCGGGATTATG
ACCGTGTTGATGTTGTTGTTAGGCAGCAATACGATTAAGATTCTGGGATG
GAGGGTTGGGGCAATGGCGACACCTGTTTTGATGGCTACCTTGGCTGCGC
CGTTCTTTGCTTATATTTCGTTTGGGGATATGCATGGGTCGAGGCAGGCG
TTGATGACAGCTTTGACAATTGGGACGATTCAAAATATTTTAAGCAAGGC
GACGAAGTATGCTTTCTTTGACCCGACGAAGGAGATGGCGTATATTCCCT
TAGATCAGGAGGCGAAGGTGAAGGGGAAGGCAGCGATCGATGTGTTGGGG
GCACGGCTGGGCAAGAGTGGGGGCGCACTGGGTCAGCAGGCGTTGGTATT
AGCGTTTGGAGGGATTATGAGGGGGGCGCCGGTGCTCGCGGGACTATTCT
ATCTGGTGATTTTTGGATGGTTGTCGAGTGTGAATCGATTGTCGAAGATG
TTTTTGGATAATGAGAAGAAGACGACGGAGGGGTGCACGAAGACGGCAGC
GAATGGACATCATTAAGTGTGTAGGAACAAAGGAGGAAAAGGTGGAAGAA
AGGGACTTTGATTGAGGAAGAGATACTGTACATGGATTCGGAGGGAGGGC
GGCGGAAGGGAATGGGGCTTTCACGGGAAAAGGTGCGGGGGAGGAAGGCA
CATTGGGCATTTTTTGATGCATGGGACGACATCTTTATCCCTAAGTGTGG
CAAAGAGGCAGTGCCAAGGGCAACAGCAGCAGCAGCAGCAGAAGAAGCAG
CAGCTGCTGCTGCAGCAGCGATGTGTGTGTGTGTGTGTGTGTGTGTGTGA
TAATATCAAGGAGTGGTGGTTCAGACAAGGCATACCAAATTGATTGCATG
ACTCCCTTTTTGGT back to topprotein sequence of jgi.p|Nanoce1779_2|587739 >mRNA_4745-protein ID=mRNA_4745-protein|Name=jgi.p|Nanoce1779_2|587739|organism=Nannochloropsis oceanica|type=polypeptide|length=642bp
MASRTPRRAASRLIRCVGVVLFFVFMQIVMASALQDHTDLRQRTSTLGKV
SRSHITEAVSSSFLLSLPAATAAVGATQVFPLLRRRGGAWDFIRREKIGT
AKALAKPKPAKKGAVNSNSKSSSISSSSSSSATTTKAGKPKRPKAALLTR
KEAPKFFALSLMMFCIIYVFTMTRDTKDTLIVSYCGAEAIAFLKVYGVVP
AAMAFMVGYSWAANHLSKRSLFYVTIVPFFAFYALFAYVLYPNRHNLHLE
QLAPIAGASLPYVRNLFRYWIFSIYYITSELWGSAGVPLLFWQCANDVTP
IDQAKRFYPLFAVLGNMAPIVSGQTTAFVSKWIKKLHPHDEHLAFENTLK
VLTSFMMAAGGIVMALYWYVMDVSSAQAAQAQAMLSKSALKKQSIAIEHS
SKKAKPGLLESMKILSKSRWLECIAVMVVSYGLTMEFTEIIWKATVKMAF
PNKQDYMEFMGNYSTVVGIMTVLMLLLGSNTIKILGWRVGAMATPVLMAT
LAAPFFAYISFGDMHGSRQALMTALTIGTIQNILSKATKYAFFDPTKEMA
YIPLDQEAKVKGKAAIDVLGARLGKSGGALGQQALVLAFGGIMRGAPVLA
GLFYLVIFGWLSSVNRLSKMFLDNEKKTTEGCTKTAANGHH* back to topmRNA from alignment at scaffold_9:530762..533474- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_4745 ID=mRNA_4745|Name=jgi.p|Nanoce1779_2|587739|organism=Nannochloropsis oceanica|type=mRNA|length=2713bp|location=Sequence derived from alignment at scaffold_9:530762..533474- (Nannochloropsis oceanica)
ACAGGTGACCCGCTTTCTCCTGTGCCTTCGTCTCCTCCACTACTGCTGCT
TGGGAGACAAGAGGTCGACTTGAGCCCTAACTGTGCAATTATTGAGTGTG
ACGTGCACGGGGCGAGTACCAAGTGAAGCAAAACACCACCATGGCGTCAC
GTACCCCTAGAAGGGCAGCCTCAAGATTAATTAGATGTGTAGGGGTTGTA
TTGTTTTTCGTGTTTATGCAGATAGTGATGGCGTCGGCATTGCAAGGTTC
GTGTACGGTGGATGCGGGTGAGTGGGAGTAGGATAGAATGTTGAGACGCT
CCAAGGCCTTGGAAAGTCGATCTTTTTTTACTCGCTTGTGACGACCCTGC
AATGCGCTGCATCTCACATGCTAGAAGATTGCCTAGCGAAGCCTTCGCAT
GGCATCATACCCTCCATTTTCTTTCGTATGTGGATACCTCCTTTCACTCC
ATACCTCCTTTCACTCCCTTCACGCACACATCCTTCCCTTAACCCCTACC
CTCCAACTTCTCGCGTTTCCCTCTCTTGCATACACACACTCACAGATCAC
ACAGATCTAAGGCAAAGGACAAGCACATTGGGCAAAGTCTCACGATCGCA
CATTACAGAAGCAGTATCATCATCATTTCTATTATCTCTACCGGCAGCAA
CAGCAGCTGTAGGGGCAACACAGGTCTTCCCTCTCTTGCGCCGCCGAGGG
GGCGCCTGGGACTTTATCAGAAGAGAAAAGATCGGCACAGCCAAGGCGCT
CGCCAAGCCAAAGCCTGCCAAGAAGGGTGCAGTCAACAGCAACAGCAAAA
GCAGCAGCATCAGTAGTAGCAGCAGCAGCAGCGCCACCACTACTAAGGCC
GGCAAACCCAAGAGACCGAAAGCAGCGCTCTTAACCCGGAAGGAAGCCCC
CAAGTTTTTCGCGTTAAGCCTGATGATGTTCTGCATCATCTACGTTTTCA
CCATGACCCGCGACACAAAAGACACCCTCATTGTTTCTTATTGTGGGGCG
GAGGCCATCGCTTTCCTGAAAGTTTACGGCGTCGTTCCCGCCGCCATGGC
CTTCATGGTGGGGTACTCCTGGGCTGCGAACCACCTGTCAAAGCGCTCCT
TATTCTACGTGACCATCGTCCCGTTCTTCGCATTTTATGCGCTTTTTGCC
TACGTGCTGTACCCGAACCGTCATAACCTCCACCTAGAGCAACTCGCCCC
TATTGCCGGTGCTAGTCTCCCCTACGTTCGCAATCTGTTTCGGTACTGGA
TCTTTTCGATTTATTACATCACTTCCGAGTTATGGGGCTCGGCAGGAGTG
CCCTTGTTGTTTTGGCAGTGTGCGAATGACGTGACCCCCATTGATCAAGC
CAAGAGGTTCTATCCCCTTTTTGCCGTTTTGGGAAATATGGCTCCGATCG
TCTCGGGACAGACCACAGCGTTCGTGAGCAAGTGGATCAAGAAACTGCAT
CCGCACGACGAGCATCTCGCTTTTGAAAACACGTTGAAGGTGTTGACTTC
CTTCATGATGGCCGCCGGCGGGATCGTCATGGCGCTCTACTGGTATGTGA
TGGACGTCAGCTCCGCGCAAGCCGCCCAAGCCCAAGCCATGCTCTCCAAG
TCGGCCTTGAAGAAACAATCCATCGCGATTGAGCACAGCAGTAAGAAGGC
GAAGCCCGGCTTGCTTGAAAGTATGAAGATTCTTTCAAAATCTCGTTGGT
TGGAATGCATTGCCGTCATGGTCGTCTCGTACGGCCTGACCATGGAATTT
ACGGAAATCATTTGGAAGGCGACGGTGAAAATGGCATTTCCCAACAAGCA
GGACTACATGGAGTTCATGGGGAATTACTCCACTGTTGTCGGGATTATGA
CCGTGTTGATGTTGTTGTTAGGCAGCAATACGATTAAGATTCTGGGATGG
AGGGTTGGGGCAATGGCGACACCTGTTTTGATGGCTACCTTGGCTGCGCC
GTTCTTTGCTTATATTTCGTTTGGGGATATGCATGGGTCGAGGCAGGCGT
TGATGACAGCTTTGACAATTGGGACGATTCAAAATATTTTAAGCAAGGCG
ACGAAGTATGCTTTCTTTGACCCGACGAAGGAGATGGCGTATATTCCCTT
AGATCAGGAGGCGAAGGTGAAGGGGAAGGCAGCGATCGATGTGTTGGGGG
CACGGCTGGGCAAGAGTGGGGGCGCACTGGGTCAGCAGGCGTTGGTATTA
GCGTTTGGAGGGATTATGAGGGGGGCGCCGGTGCTCGCGGGACTATTCTA
TCTGGTGATTTTTGGATGGTTGTCGAGTGTGAATCGATTGTCGAAGATGT
TTTTGGATAATGAGAAGAAGACGACGGAGGGGTGCACGAAGACGGCAGCG
AATGGACATCATTAAGTGTGTAGGAACAAAGGAGGAAAAGGTGGAAGAAA
GGGACTTTGATTGAGGAAGAGATACTGTACATGGATTCGGAGGGAGGGCG
GCGGAAGGGAATGGGGCTTTCACGGGAAAAGGTGCGGGGGAGGAAGGCAC
ATTGGGCATTTTTTGATGCATGGGACGACATCTTTATCCCTAAGTGTGGC
AAAGAGGCAGTGCCAAGGGCAACAGCAGCAGCAGCAGCAGAAGAAGCAGC
AGCTGCTGCTGCAGCAGCGATGTGTGTGTGTGTGTGTGTGTGTGTGTGAT
AATATCAAGGAGTGGTGGTTCAGACAAGGCATACCAAATTGATTGCATGA
CTCCCTTTTTGGT back to topCoding sequence (CDS) from alignment at scaffold_9:530762..533474- >mRNA_4745 ID=mRNA_4745|Name=jgi.p|Nanoce1779_2|587739|organism=Nannochloropsis oceanica|type=CDS|length=3852bp|location=Sequence derived from alignment at scaffold_9:530762..533474- (Nannochloropsis oceanica)
ATCACACAGATCTAAGGCAAAGGACAAGCACATTGGGCAAAGTCTCACGA
TCGCACATTACAGAAGCAGTATCATCATCATTTCTATTATCTCTACCGGC
AGCAACAGCAGCTGTAGGGGCAACACAGGTCTTCCCTCTCTTGCGCCGCC
GAGGGGGCGCCTGGGACTTTATCAGAAGAGAAAAGATCGGCACAGCCAAG
GCGCTCGCCAAGCCAAAGCCTGCCAAGAAGGGTGCAGTCAACAGCAACAG
CAAAAGCAGCAGCATCAGTAGTAGCAGCAGCAGCAGCGCCACCACTACTA
AGGCCGGCAAACCCAAGAGACCGAAAGCAGCGCTCTTAACCCGGAAGGAA
GCCCCCAAGTTTTTCGCGTTAAGCCTGATGATGTTCTGCATCATCTACGT
TTTCACCATGACCCGCGACACAAAAGACACCCTCATTGTTTCTTATTGTG
GGGCGGAGGCCATCGCTTTCCTGAAAGTTTACGGCGTCGTTCCCGCCGCC
ATGGCCTTCATGGTGGGGTACTCCTGGGCTGCGAACCACCTGTCAAAGCG
CTCCTTATTCTACGTGACCATCGTCCCGTTCTTCGCATTTTATGCGCTTT
TTGCCTACGTGCTGTACCCGAACCGTCATAACCTCCACCTAGAGCAACTC
GCCCCTATTGCCGGTGCTAGTCTCCCCTACGTTCGCAATCTGTTTCGGTA
CTGGATCTTTTCGATTTATTACATCACTTCCGAGTTATGGGGCTCGGCAG
GAGTGCCCTTGTTGTTTTGGCAGTGTGCGAATGACGTGACCCCCATTGAT
CAAGCCAAGAGGTTCTATCCCCTTTTTGCCGTTTTGGGAAATATGGCTCC
GATCGTCTCGGGACAGACCACAGCGTTCGTGAGCAAGTGGATCAAGAAAC
TGCATCCGCACGACGAGCATCTCGCTTTTGAAAACACGTTGAAGGTGTTG
ACTTCCTTCATGATGGCCGCCGGCGGGATCGTCATGGCGCTCTACTGGTA
TGTGATGGACGTCAGCTCCGCGCAAGCCGCCCAAGCCCAAGCCATGCTCT
CCAAGTCGGCCTTGAAGAAACAATCCATCGCGATTGAGCACAGCAGTAAG
AAGGCGAAGCCCGGCTTGCTTGAAAGTATGAAGATTCTTTCAAAATCTCG
TTGGTTGGAATGCATTGCCGTCATGGTCGTCTCGTACGGCCTGACCATGG
AATTTACGGAAATCATTTGGAAGGCGACGGTGAAAATGGCATTTCCCAAC
AAGCAGGACTACATGGAGTTCATGGGGAATTACTCCACTGTTGTCGGGAT
TATGACCGTGTTGATGTTGTTGTTAGGCAGCAATACGATTAAGATTCTGG
GATGGAGGGTTGGGGCAATGGCGACACCTGTTTTGATGGCTACCTTGGCT
GCGCCGTTCTTTGCTTATATTTCGTTTGGGGATATGCATGGGTCGAGGCA
GGCGTTGATGACAGCTTTGACAATTGGGACGATTCAAAATATTTTAAGCA
AGGCGACGAAGTATGCTTTCTTTGACCCGACGAAGGAGATGGCGTATATT
CCCTTAGATCAGGAGGCGAAGGTGAAGGGGAAGGCAGCGATCGATGTGTT
GGGGGCACGGCTGGGCAAGAGTGGGGGCGCACTGGGTCAGCAGGCGTTGG
TATTAGCGTTTGGAGGGATTATGAGGGGGGCGCCGGTGCTCGCGGGACTA
TTCTATCTGGTGATTTTTGGATGGTTGTCGAGTGTGAATCGATTGTCGAA
GATGTTTTTGGATAATGAGAAGAAGACGACGGAGGGGTGCACGAAGACGG
CAGCGAATGGACATCATTAAATGGCGTCACGTACCCCTAGAAGGGCAGCC
TCAAGATTAATTAGATGTGTAGGGGTTGTATTGTTTTTCGTGTTTATGCA
GATAGTGATGGCGTCGGCATTGCAAGATCACACAGATCTAAGGCAAAGGA
CAAGCACATTGGGCAAAGTCTCACGATCGCACATTACAGAAGCAGTATCA
TCATCATTTCTATTATCTCTACCGGCAGCAACAGCAGCTGTAGGGGCAAC
ACAGGTCTTCCCTCTCTTGCGCCGCCGAGGGGGCGCCTGGGACTTTATCA
GAAGAGAAAAGATCGGCACAGCCAAGGCGCTCGCCAAGCCAAAGCCTGCC
AAGAAGGGTGCAGTCAACAGCAACAGCAAAAGCAGCAGCATCAGTAGTAG
CAGCAGCAGCAGCGCCACCACTACTAAGGCCGGCAAACCCAAGAGACCGA
AAGCAGCGCTCTTAACCCGGAAGGAAGCCCCCAAGTTTTTCGCGTTAAGC
CTGATGATGTTCTGCATCATCTACGTTTTCACCATGACCCGCGACACAAA
AGACACCCTCATTGTTTCTTATTGTGGGGCGGAGGCCATCGCTTTCCTGA
AAGTTTACGGCGTCGTTCCCGCCGCCATGGCCTTCATGGTGGGGTACTCC
TGGGCTGCGAACCACCTGTCAAAGCGCTCCTTATTCTACGTGACCATCGT
CCCGTTCTTCGCATTTTATGCGCTTTTTGCCTACGTGCTGTACCCGAACC
GTCATAACCTCCACCTAGAGCAACTCGCCCCTATTGCCGGTGCTAGTCTC
CCCTACGTTCGCAATCTGTTTCGGTACTGGATCTTTTCGATTTATTACAT
CACTTCCGAGTTATGGGGCTCGGCAGGAGTGCCCTTGTTGTTTTGGCAGT
GTGCGAATGACGTGACCCCCATTGATCAAGCCAAGAGGTTCTATCCCCTT
TTTGCCGTTTTGGGAAATATGGCTCCGATCGTCTCGGGACAGACCACAGC
GTTCGTGAGCAAGTGGATCAAGAAACTGCATCCGCACGACGAGCATCTCG
CTTTTGAAAACACGTTGAAGGTGTTGACTTCCTTCATGATGGCCGCCGGC
GGGATCGTCATGGCGCTCTACTGGTATGTGATGGACGTCAGCTCCGCGCA
AGCCGCCCAAGCCCAAGCCATGCTCTCCAAGTCGGCCTTGAAGAAACAAT
CCATCGCGATTGAGCACAGCAGTAAGAAGGCGAAGCCCGGCTTGCTTGAA
AGTATGAAGATTCTTTCAAAATCTCGTTGGTTGGAATGCATTGCCGTCAT
GGTCGTCTCGTACGGCCTGACCATGGAATTTACGGAAATCATTTGGAAGG
CGACGGTGAAAATGGCATTTCCCAACAAGCAGGACTACATGGAGTTCATG
GGGAATTACTCCACTGTTGTCGGGATTATGACCGTGTTGATGTTGTTGTT
AGGCAGCAATACGATTAAGATTCTGGGATGGAGGGTTGGGGCAATGGCGA
CACCTGTTTTGATGGCTACCTTGGCTGCGCCGTTCTTTGCTTATATTTCG
TTTGGGGATATGCATGGGTCGAGGCAGGCGTTGATGACAGCTTTGACAAT
TGGGACGATTCAAAATATTTTAAGCAAGGCGACGAAGTATGCTTTCTTTG
ACCCGACGAAGGAGATGGCGTATATTCCCTTAGATCAGGAGGCGAAGGTG
AAGGGGAAGGCAGCGATCGATGTGTTGGGGGCACGGCTGGGCAAGAGTGG
GGGCGCACTGGGTCAGCAGGCGTTGGTATTAGCGTTTGGAGGGATTATGA
GGGGGGCGCCGGTGCTCGCGGGACTATTCTATCTGGTGATTTTTGGATGG
TTGTCGAGTGTGAATCGATTGTCGAAGATGTTTTTGGATAATGAGAAGAA
GACGACGGAGGGGTGCACGAAGACGGCAGCGAATGGACATCATTAAATGG
CGTCACGTACCCCTAGAAGGGCAGCCTCAAGATTAATTAGATGTGTAGGG
GTTGTATTGTTTTTCGTGTTTATGCAGATAGTGATGGCGTCGGCATTGCA
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