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Properties
| Property Name | Value |
|---|
| TranscriptId | 587737 |
| Track | FilteredModels2 |
| ProteinId | 587651 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_9 | supercontig | scaffold_9:475473..476780 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_4721 ID=mRNA_4721|Name=jgi.p|Nanoce1779_2|587651|organism=Nannochloropsis oceanica|type=mRNA|length=1308bp
CCCAAATCCAGTGCTCAACACTCAGCAATCCCAATGTTTTTTCATACTTG
TCGTGAACTTTAAGATAAAACACTCCCCTTCTTACACTAAACACCCCATC
CTCTCACAGTGTCCCTCAATGGATGATCAACAACACCTAGCGAGACTCGA
GTCGCATGACTCCGACTCAGAATCATGTTTTTCCACCAACAACGCGTTTG
GACAGCTTCACTCCCCGCATACTCCTTTTAGTCGTTCTAGTCATCAGCGG
CCGCGCCGTCATGCATTCTCGTCCTACGCGCTCTTCACGTCACTGCTAAT
GTGGTTTGGAGGAGTGTCCGCCTCCAGGTCCATGCAGAGGTGGGCTTGCC
CAACCTGTCACCCATCTGGCTTTGTTGTGTCCTCGTCACCATCGCCATCG
TGTCTTTGGCGGTCTGGCCTCTCCCACCACCCTCAGCAGAACCACGCACG
CACCAGTGGCAGCCTAAGCATTTTTCCGAGAAGGTCAAGACGAGGCGATG
TCCGCTGTTCCGTAGACGCAGGCCTGGCACTTTACGACTTGCAGATCTGG
GCCAAGGAATTGGTCGACACCCAACTGACGCACCTCACGCCCGTCAGCGG
CGCCGTCCTGTATGGCGCCGGCCTCCTTACCTCCCTTTCCCCTTGCGCCC
TCTCTCTTGTTCCTCTGACTATGGCTTACCTCACGGACGATGGTACCGAC
CCTTCCCGCGACCAGAAGACCCTCCTCTTCCGCGCTGGCATGTTCACTGT
GGGGCTAGCCACATCTCTCTCCGTCCTCGGCATCTCCGCTACCTTGGCTG
GGAAGCTTTTTGGATCTGCTGGTGCAGGGGCATTGGGCGCGGCACTTCCT
TTGACGGCATCGGCTGTGGCTGTTGTCATGGGCCTTAATCTATTAGACCT
GGTTAACCTCAAGCTCCCCTCGTTTGATGCCACCTTGCAATTGGACAAAT
TTCCCCCCTCCCTTCAAGCCTTCCTCCTGGGCGCAACTTCTGCACTCATC
GCATCTCCGTGCTCCACACCCGTGCTTGCTTCCATTCTAGGATTTGTAGC
CGCGTCGGGCGAGCCATACCTTGGGGCAGGTCTGCTCTTTTCCTATTCAT
TGGGGTACTCCACCCCATTGCTGCTGGCAGGTATTTTGTCGGGAACAGTC
ACTTCATTCATCGCTAAGAGGGGGGATGGATTTTCGTGGGTCACACCCGC
GACAGCCGCCATGCTGATTTCATATGGGACGTATTCGTCGTTGTCGACCT
TGTTTCCGCCATTGGGCTAGGGGAGGGTAGGAGGAGATGATTGGGGGAGG
GAGGGCGC back to topprotein sequence of jgi.p|Nanoce1779_2|587651 >mRNA_4721-protein ID=mRNA_4721-protein|Name=jgi.p|Nanoce1779_2|587651|organism=Nannochloropsis oceanica|type=polypeptide|length=384bp
MDDQQHLARLESHDSDSESCFSTNNAFGQLHSPHTPFSRSSHQRPRRHAF
SSYALFTSLLMWFGGVSASRSMQRWACPTCHPSGFVVSSSPSPSCLWRSG
LSHHPQQNHARTSGSLSIFPRRSRRGDVRCSVDAGLALYDLQIWAKELVD
TQLTHLTPVSGAVLYGAGLLTSLSPCALSLVPLTMAYLTDDGTDPSRDQK
TLLFRAGMFTVGLATSLSVLGISATLAGKLFGSAGAGALGAALPLTASAV
AVVMGLNLLDLVNLKLPSFDATLQLDKFPPSLQAFLLGATSALIASPCST
PVLASILGFVAASGEPYLGAGLLFSYSLGYSTPLLLAGILSGTVTSFIAK
RGDGFSWVTPATAAMLISYGTYSSLSTLFPPLG* back to topmRNA from alignment at scaffold_9:475473..476780- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_4721 ID=mRNA_4721|Name=jgi.p|Nanoce1779_2|587651|organism=Nannochloropsis oceanica|type=mRNA|length=1308bp|location=Sequence derived from alignment at scaffold_9:475473..476780- (Nannochloropsis oceanica)
CCCAAATCCAGTGCTCAACACTCAGCAATCCCAATGTTTTTTCATACTTG
TCGTGAACTTTAAGATAAAACACTCCCCTTCTTACACTAAACACCCCATC
CTCTCACAGTGTCCCTCAATGGATGATCAACAACACCTAGCGAGACTCGA
GTCGCATGACTCCGACTCAGAATCATGTTTTTCCACCAACAACGCGTTTG
GACAGCTTCACTCCCCGCATACTCCTTTTAGTCGTTCTAGTCATCAGCGG
CCGCGCCGTCATGCATTCTCGTCCTACGCGCTCTTCACGTCACTGCTAAT
GTGGTTTGGAGGAGTGTCCGCCTCCAGGTCCATGCAGAGGTGGGCTTGCC
CAACCTGTCACCCATCTGGCTTTGTTGTGTCCTCGTCACCATCGCCATCG
TGTCTTTGGCGGTCTGGCCTCTCCCACCACCCTCAGCAGAACCACGCACG
CACCAGTGGCAGCCTAAGCATTTTTCCGAGAAGGTCAAGACGAGGCGATG
TCCGCTGTTCCGTAGACGCAGGCCTGGCACTTTACGACTTGCAGATCTGG
GCCAAGGAATTGGTCGACACCCAACTGACGCACCTCACGCCCGTCAGCGG
CGCCGTCCTGTATGGCGCCGGCCTCCTTACCTCCCTTTCCCCTTGCGCCC
TCTCTCTTGTTCCTCTGACTATGGCTTACCTCACGGACGATGGTACCGAC
CCTTCCCGCGACCAGAAGACCCTCCTCTTCCGCGCTGGCATGTTCACTGT
GGGGCTAGCCACATCTCTCTCCGTCCTCGGCATCTCCGCTACCTTGGCTG
GGAAGCTTTTTGGATCTGCTGGTGCAGGGGCATTGGGCGCGGCACTTCCT
TTGACGGCATCGGCTGTGGCTGTTGTCATGGGCCTTAATCTATTAGACCT
GGTTAACCTCAAGCTCCCCTCGTTTGATGCCACCTTGCAATTGGACAAAT
TTCCCCCCTCCCTTCAAGCCTTCCTCCTGGGCGCAACTTCTGCACTCATC
GCATCTCCGTGCTCCACACCCGTGCTTGCTTCCATTCTAGGATTTGTAGC
CGCGTCGGGCGAGCCATACCTTGGGGCAGGTCTGCTCTTTTCCTATTCAT
TGGGGTACTCCACCCCATTGCTGCTGGCAGGTATTTTGTCGGGAACAGTC
ACTTCATTCATCGCTAAGAGGGGGGATGGATTTTCGTGGGTCACACCCGC
GACAGCCGCCATGCTGATTTCATATGGGACGTATTCGTCGTTGTCGACCT
TGTTTCCGCCATTGGGCTAGGGGAGGGTAGGAGGAGATGATTGGGGGAGG
GAGGGCGC back to topCoding sequence (CDS) from alignment at scaffold_9:475473..476780- >mRNA_4721 ID=mRNA_4721|Name=jgi.p|Nanoce1779_2|587651|organism=Nannochloropsis oceanica|type=CDS|length=1152bp|location=Sequence derived from alignment at scaffold_9:475473..476780- (Nannochloropsis oceanica)
ATGGATGATCAACAACACCTAGCGAGACTCGAGTCGCATGACTCCGACTC
AGAATCATGTTTTTCCACCAACAACGCGTTTGGACAGCTTCACTCCCCGC
ATACTCCTTTTAGTCGTTCTAGTCATCAGCGGCCGCGCCGTCATGCATTC
TCGTCCTACGCGCTCTTCACGTCACTGCTAATGTGGTTTGGAGGAGTGTC
CGCCTCCAGGTCCATGCAGAGGTGGGCTTGCCCAACCTGTCACCCATCTG
GCTTTGTTGTGTCCTCGTCACCATCGCCATCGTGTCTTTGGCGGTCTGGC
CTCTCCCACCACCCTCAGCAGAACCACGCACGCACCAGTGGCAGCCTAAG
CATTTTTCCGAGAAGGTCAAGACGAGGCGATGTCCGCTGTTCCGTAGACG
CAGGCCTGGCACTTTACGACTTGCAGATCTGGGCCAAGGAATTGGTCGAC
ACCCAACTGACGCACCTCACGCCCGTCAGCGGCGCCGTCCTGTATGGCGC
CGGCCTCCTTACCTCCCTTTCCCCTTGCGCCCTCTCTCTTGTTCCTCTGA
CTATGGCTTACCTCACGGACGATGGTACCGACCCTTCCCGCGACCAGAAG
ACCCTCCTCTTCCGCGCTGGCATGTTCACTGTGGGGCTAGCCACATCTCT
CTCCGTCCTCGGCATCTCCGCTACCTTGGCTGGGAAGCTTTTTGGATCTG
CTGGTGCAGGGGCATTGGGCGCGGCACTTCCTTTGACGGCATCGGCTGTG
GCTGTTGTCATGGGCCTTAATCTATTAGACCTGGTTAACCTCAAGCTCCC
CTCGTTTGATGCCACCTTGCAATTGGACAAATTTCCCCCCTCCCTTCAAG
CCTTCCTCCTGGGCGCAACTTCTGCACTCATCGCATCTCCGTGCTCCACA
CCCGTGCTTGCTTCCATTCTAGGATTTGTAGCCGCGTCGGGCGAGCCATA
CCTTGGGGCAGGTCTGCTCTTTTCCTATTCATTGGGGTACTCCACCCCAT
TGCTGCTGGCAGGTATTTTGTCGGGAACAGTCACTTCATTCATCGCTAAG
AGGGGGGATGGATTTTCGTGGGTCACACCCGCGACAGCCGCCATGCTGAT
TTCATATGGGACGTATTCGTCGTTGTCGACCTTGTTTCCGCCATTGGGCT
AG back to top
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