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Properties
| Property Name | Value |
|---|
| TranscriptId | 527763 |
| Track | FilteredModels2 |
| ProteinId | 527677 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_9 | supercontig | scaffold_9:449342..450340 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_4709 ID=mRNA_4709|Name=jgi.p|Nanoce1779_2|527677|organism=Nannochloropsis oceanica|type=mRNA|length=951bp
ATGAGTAAAGGGAGCAAGCAAAGTTCATTTTTGTGCTATCGACGGGTGGA
TGCTCAGCAGCAGCAACGGCAGCCGCAGGGTGGGATATTAATTGATGAGG
ACGAGGACGATGCCAAGGAGGGCGAGGACGGGAAGGAGGAAGGGGAGGAA
GGAGGGGAGCAGCTGTTACCTTTGGTGGAAGTGGTAATTGTCGGGAAGGG
CGAGGAGCCGGGGGAGGGCTTCGAGCGACTGAATAAACCGCTGTGCAAAG
GCGACCGCCCTCTCTTCCTTTGCTATCGCCGGGCTGTGCCTGAAGGAGGA
CCAAGAGGAGGAGGAGAAGCTCTTGCATGGCCACCGGCTGGAGGAGTGAA
AGTAGGGGATCTCGTCGATTTGAAAGACAATCTGGGGAGATGGTGTGTAG
CTCAGGTACGGCTCGTCAGAAATAACAGCGGCAGCAGCAGCAACAGCAGC
GATACCACGTTGTCGCTACGTCCCCGAAATCGAAATTGGGATGAAGAGCT
GACGATGGATTCGCCCAGGCTGGCTGCTGTAGGAACGCATACAGGCATGG
TGCTTGATGGGGAAGGGAGAGGGAGGGGGGAAGGGTTGTTGAGTGTGAGA
CCGCAGGGGTCAAGATGGTACTGGACCGAGGAACAGCTGGAGGAGATGGT
GAAAAGAATGCAAGCGGGGGAAGATCAGCTCAAGGCATTAGCTGCTGATA
TGAAGGCTTTAGGTGGGGGGAAGTGTGGGAAGGAGGAACTGAACGATCTG
TGCAGGCGGGTTTTGCCTGCTTTCATGGAGATGTGCTTTGCCTGCTCGTA
CCCGGAGGAGACCGATACAATACTGAAGGCGGCTGTGGAGGCGCTTAAGG
TCGCATATTCTCTCCTGGCCCATGTGTTGATTATCTTGGGGGGGGCACCT
TGCCCCTCGACGCTGCAGAGGGCGCTGGCTATGGTCTTTCACGCCGACCC
C back to topprotein sequence of jgi.p|Nanoce1779_2|527677 >mRNA_4709-protein ID=mRNA_4709-protein|Name=jgi.p|Nanoce1779_2|527677|organism=Nannochloropsis oceanica|type=polypeptide|length=317bp
MSKGSKQSSFLCYRRVDAQQQQRQPQGGILIDEDEDDAKEGEDGKEEGEE
GGEQLLPLVEVVIVGKGEEPGEGFERLNKPLCKGDRPLFLCYRRAVPEGG
PRGGGEALAWPPAGGVKVGDLVDLKDNLGRWCVAQVRLVRNNSGSSSNSS
DTTLSLRPRNRNWDEELTMDSPRLAAVGTHTGMVLDGEGRGRGEGLLSVR
PQGSRWYWTEEQLEEMVKRMQAGEDQLKALAADMKALGGGKCGKEELNDL
CRRVLPAFMEMCFACSYPEETDTILKAAVEALKVAYSLLAHVLIILGGAP
CPSTLQRALAMVFHADP back to topmRNA from alignment at scaffold_9:449342..450340+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_4709 ID=mRNA_4709|Name=jgi.p|Nanoce1779_2|527677|organism=Nannochloropsis oceanica|type=mRNA|length=999bp|location=Sequence derived from alignment at scaffold_9:449342..450340+ (Nannochloropsis oceanica)
ATGAGTAAAGGGAGCAAGCAAAGTTCATTTTTGTGCTATCGACGGGTGGA
TGCTCAGCAGCAGCAACGGCAGCCGCAGGGTGGGATATTAATTGATGAGG
ACGAGGACGATGCCAAGGAGGGCGAGGACGGGAAGGAGGAAGGGGAGGAA
GGAGGGGAGCAGCTGTTACCTTTGGTGGAAGTGGTAATTGTCGGGAAGGG
CGAGGAGCCGGGGGAGGGCTTCGAGCGACTGAATAAACCGCTGTGCAAAG
GCGACCGCCCTCTCTTCCTTTGCTATCGCCGGGCTGTGCCTGAAGGAGGA
CCAAGAGGAGGAGGAGAAGCTCTTGCATGGCCACCGGCTGGAGGAGTGAA
AGTAGGGGATCTCGTCGATTTGAAAGACAATCTGGGGAGATGGTGTGTAG
CTCAGGTACGGCTCGTCAGAAATAACAGCGGCAGCAGCAGCAACAGCAGC
GATACCACGTTGTCGCTACGTCCCCGAAATCGAAATTGGGATGAAGAGCT
GACGATGGATTCGCCCAGGCTGGCTGCTGTAGGAACGCATACAGGCATGG
TGCTTGATGGGGAAGGGAGTGCGGGTGGGGCTGGTCCCGAGGGCGGAAGG
GAGGGAGGATGGGAAGGAGGGAGGGGGGAAGGGTTGTTGAGTGTGAGACC
GCAGGGGTCAAGATGGTACTGGACCGAGGAACAGCTGGAGGAGATGGTGA
AAAGAATGCAAGCGGGGGAAGATCAGCTCAAGGCATTAGCTGCTGATATG
AAGGCTTTAGGTGGGGGGAAGTGTGGGAAGGAGGAACTGAACGATCTGTG
CAGGCGGGTTTTGCCTGCTTTCATGGAGATGTGCTTTGCCTGCTCGTACC
CGGAGGAGACCGATACAATACTGAAGGCGGCTGTGGAGGCGCTTAAGGTC
GCATATTCTCTCCTGGCCCATGTGTTGATTATCTTGGGGGGGGCACCTTG
CCCCTCGACGCTGCAGAGGGCGCTGGCTATGGTCTTTCACGCCGACCCC back to topCoding sequence (CDS) from alignment at scaffold_9:449342..450340+ >mRNA_4709 ID=mRNA_4709|Name=jgi.p|Nanoce1779_2|527677|organism=Nannochloropsis oceanica|type=CDS|length=1902bp|location=Sequence derived from alignment at scaffold_9:449342..450340+ (Nannochloropsis oceanica)
ATGAGTAAAGGGAGCAAGCAAAGTTCATTTTTGTGCTATCGACGGGTGGA
TGCTCAGCAGCAGCAACGGCAGCCGCAGGGTGGGATATTAATTGATGAGG
ACGAGGACGATGCCAAGGAGGGCGAGGACGGGAAGGAGGAAGGGGAGGAA
GGAGGGGAGCAGCTGTTACCTTTGGTGGAAGTGGTAATTGTCGGGAAGGG
CGAGGAGCCGGGGGAGGGCTTCGAGCGACTGAATAAACCGCTGTGCAAAG
GCGACCGCCCTCTCTTCCTTTGCTATCGCCGGGCTGTGCCTGAAGGAGGA
CCAAGAGGAGGAGGAGAAGCTCTTGCATGGCCACCGGCTGGAGGAGTGAA
AGTAGGGGATCTCGTCGATTTGAAAGACAATCTGGGGAGATGGTGTGTAG
CTCAGGTACGGCTCGTCAGAAATAACAGCGGCAGCAGCAGCAACAGCAGC
GATACCACGTTGTCGCTACGTCCCCGAAATCGAAATTGGGATGAAGAGCT
GACGATGGATTCGCCCAGGCTGGCTGCTGTAGGAACGCATACAGGCATGG
TGCTTGATGGGGAAGGGAGAGGGAGGGGGGAAGGGTTGTTGAGTGTGAGA
CCGCAGGGGTCAAGATGGTACTGGACCGAGGAACAGCTGGAGGAGATGGT
GAAAAGAATGCAAGCGGGGGAAGATCAGCTCAAGGCATTAGCTGCTGATA
TGAAGGCTTTAGGTGGGGGGAAGTGTGGGAAGGAGGAACTGAACGATCTG
TGCAGGCGGGTTTTGCCTGCTTTCATGGAGATGTGCTTTGCCTGCTCGTA
CCCGGAGGAGACCGATACAATACTGAAGGCGGCTGTGGAGGCGCTTAAGG
TCGCATATTCTCTCCTGGCCCATGTGTTGATTATCTTGGGGGGGGCACCT
TGCCCCTCGACGCTGCAGAGGGCGCTGGCTATGGTCTTTCACGCCGACCC
CATGAGTAAAGGGAGCAAGCAAAGTTCATTTTTGTGCTATCGACGGGTGG
ATGCTCAGCAGCAGCAACGGCAGCCGCAGGGTGGGATATTAATTGATGAG
GACGAGGACGATGCCAAGGAGGGCGAGGACGGGAAGGAGGAAGGGGAGGA
AGGAGGGGAGCAGCTGTTACCTTTGGTGGAAGTGGTAATTGTCGGGAAGG
GCGAGGAGCCGGGGGAGGGCTTCGAGCGACTGAATAAACCGCTGTGCAAA
GGCGACCGCCCTCTCTTCCTTTGCTATCGCCGGGCTGTGCCTGAAGGAGG
ACCAAGAGGAGGAGGAGAAGCTCTTGCATGGCCACCGGCTGGAGGAGTGA
AAGTAGGGGATCTCGTCGATTTGAAAGACAATCTGGGGAGATGGTGTGTA
GCTCAGGTACGGCTCGTCAGAAATAACAGCGGCAGCAGCAGCAACAGCAG
CGATACCACGTTGTCGCTACGTCCCCGAAATCGAAATTGGGATGAAGAGC
TGACGATGGATTCGCCCAGGCTGGCTGCTGTAGGAACGCATACAGGCATG
GTGCTTGATGGGGAAGGGAGAGGGAGGGGGGAAGGGTTGTTGAGTGTGAG
ACCGCAGGGGTCAAGATGGTACTGGACCGAGGAACAGCTGGAGGAGATGG
TGAAAAGAATGCAAGCGGGGGAAGATCAGCTCAAGGCATTAGCTGCTGAT
ATGAAGGCTTTAGGTGGGGGGAAGTGTGGGAAGGAGGAACTGAACGATCT
GTGCAGGCGGGTTTTGCCTGCTTTCATGGAGATGTGCTTTGCCTGCTCGT
ACCCGGAGGAGACCGATACAATACTGAAGGCGGCTGTGGAGGCGCTTAAG
GTCGCATATTCTCTCCTGGCCCATGTGTTGATTATCTTGGGGGGGGCACC
TTGCCCCTCGACGCTGCAGAGGGCGCTGGCTATGGTCTTTCACGCCGACC
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