|
|
Properties
| Property Name | Value |
| TranscriptId | 587684 |
| Track | FilteredModels2 |
| ProteinId | 587598 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| scaffold_9 | supercontig | scaffold_9:443971..447036 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_4707 ID=mRNA_4707|Name=jgi.p|Nanoce1779_2|587598|organism=Nannochloropsis oceanica|type=mRNA|length=3066bp ACAGCATGGCAAGAAGGATGGGAAAAAGGAGCTCTTGACCAAGCTACAGG CCGCCGCCCGAATGCTCTTCAAGCATCAGCTCCCGCGGCCACTCCATGCT AAGGACACGCCCCTTCTCGAGGCAGAGGCCGCCCCGTCGACCGCCGGGTC TCCAACCTCTGTTTTAATCGCGGCTAAAGCGGGCCGTCGTCGTCTGCATA TATTCAAATGGAAACGTTTTCTGGGTGTAGTGGAGGCACCGGCGGAAGTG ACGTGTTGCAAGCTGGTGTCTATGACGGGGGAGGGTCACCAGTGCATGTC CTTGGTCGTGGGCTGTAGGTCGGGCAGCGTCTACCGTGTGGAAGACGTCG AGGCCCGCATATCTGCTGCTGCCAACGGTGATGGACGTTGTAGCACGGGG ATGCTCTGCCTGGGGTCTGAACACTTGTGCTTTAGCTTCCCAGACGACAC CTCACAAATCGACAAGCTAATGGTAGGATCAAGGGAGGGGGCAAAAGAGT CGTCGGATCAAACTGTCGTTGCCGTGGTGAGGAGAGACGCGGACACCGTC GTACACCTAGTATGGAAGGACAAGGACACGCCCCCAGCTGACTATTCCAA AGTAGAGCTGGATTCACCCGGGCATCCACTAGCATGTCTTCCGGCTCCCA CAGACGGCAACACAATCTTACTGCACGTCCGCCACGACCGAAATCAAGGC CCTCCTACGCCGTCTGGCGGCTTCCAGCTCTACTTCACACCTTTGGTACA CGATACAACAATAAAGGATCCACAAAAGAGGCAGGCGGTGCTTTTGCATG TCTTTCATAAGCAAGTGGTTGCGGTGCTACCTGTGCCCATTGGAGGGAAC AAGGGCGCGACGCTGGTGGCGGTTGAACGAGATGGTCTCCTATCACTCCT GCCCGATCCCAGGGCAATGAAAACGTCTCAATCAAAGGTGGAGCAGGTTC GCATGGCCCAGCTTTCACTCAGTCCGGCAACAGGAGGGCTCCAAGCCGCT GTCCTTGTTGGTAATAGCGACATTATCGCCTGCCTCTCTACTCGAGGCAG CGTTTGGTTCTCCCGCCTCTCCATCCTCTTTCCTGGCATATTCTTCGACA GTTCCAATCATTACAGCGCACTGGCGCCTCCCTCTTCTTCTCTGTCCTCC TCCAATATAAACTGTATGCGCGTGGACTGCGGCCCGGAAGTGATTGCCTT GGCGGCCCCTTCCTCCTCCACCACCTCCTCCTCCACTTCCTCCTCCTTTC CCTCCTCCTCTCCACAACAGCCCCCGGTTCTCTATCTACTGACCCGTCGA GGACGAATTTTGTGCTTTCAAAGCTTTCCTTCCATACCTCATCCTTATAT TTCACGTGTTTCCTTTCTGATGTCTGGGGCCGCCACCGCCGCCGCCTCTA GCACCACCCCTCATCCTCTTATCGCTGGTGCCGTAAATATTGATGCTGAT GCTTCTATAGACGAGACCGAAACCCTCCTCAACCAAATCGAACGAGCCTG TCATCAGACCAAAGCCTCCCACCAGCAAATCGCTCACACGGAGGACGCAA TTGAGAAGGTCCGCACGGCCTGGACAGTCCTTGCGGGCAAGGGCCTTCTC GAAACCTTCCTCGACGTAATCCATCCTTCCTCCTCCTCCCCTTCCCCATC CTCCTTTCTCAAAGTACGCCTTCACAACCCCGCTGAAAACGAGACCTTGC CTTTACAGGGGTGGTCGTTGATTGTACGCATCGAAGCAGCATCTGCGTCG GCCGCCCAGGGACCATCGGCCCTCCTCCTTCCTGTTATCTCTCAGCCGGC AGCGGCTGTTTTGTCGGGGGCGAGTTGGGGTTTAGATGATATTGGGCCTG GAGAAGACTTTGAAGCTCACATGGTTTTACCTGTCACTGGTTCACTCTTG CCGCACACGGTGCGTGTGACGTTGTGTTGTCCCTTTGCTGGTGCTGGTGA TGGTCGTAGTGACGCAAGGGCGTCCTCACCAAGAGTGCAACAGCAAAAGG AGGTCGGTGTGTGTTTGGAGCTGGGGTCGCGGCCGCTTGACGTGCTGGAC TTGGCTCGGCCACCCAAGACGGTGCCCTTCACACCAGCAGGGATGCGGAC AATGGAGGCAACAGCAGCGAAACGGGGCCGAAATCAGAACTGGGAAGGGA GTCTCGCGCAATTATTGTTTGAGAAGGTGACATGTAATGATAACGAGGAT GGATATGGAGGTGAGCGAAGAGGAAGGAAGGAAGAATGTGGTAAAAGGGC TGCGGGAGGGATACTTAAAGGAGGAGATGCAACAATACCCATGGCCTTGC CGAGACCGTTGATCTCCTCAACCCTGCGTATTTTGTGGCCTGCTGCGCCG ATGGAGATGGAAAAGGGGCAAACAATGGATGGGGACGCTATGTCGCCCGT TTGTTTGCCTGCCTTAGTTGATCTTTTGGGTCCTTGTGACGGGGCCAAAA TAATAGAGGAAGGGGGAGGATGGGCGCTCGCTCTGCAGGCACCGGGGAGC AAGCTACTGCTAGCCCGCTTGCTGGCGGGAAAGGCGCGGATTCGGATGGA CGACGAAGAGAACAGCGAAGCGACAGGGTTGCAGCTCTCCTTGACGGGCA CTGACCAGGGTCTCGTCAGCTTGTTGCGGGCGGCGTGTTGCCAAAGGCTG GGAGTGGGAGGTTCGGTGCGCGCGCGACGATTGCCACTGACGGGTACGCG GATGAAGACTCTAGAGACGGCGCACCATCAGGCGACAGCTTTGGCGGCCG AGCTTCAGGAGGCAATAGAGCGCGATGTAGTAGAGGTAGTAGAGGAGGAG GGGACGCTGGGACAGGCACAAGAGAAGTGTCTTCAAAAGAGATTGGCACT TGCCCGGCGAGTGGTGAAGCTGGCCGTAGTTCTGGCGAAAGAGGTTGATG AGGCTTTCCTCTTGGATCTGCGGCCGGATGGGTTTCAAGAGAGGGGATTT GAAAAGGAAGGAACGGAGGCGGACGGTATGCAGGACGAAGAAGGGTATTT TAGAAACTAACCGACATAGCCATTCGTTGAAAAAGATAAAAAATATTCTG AAATCCTATGCATCAA back to topprotein sequence of jgi.p|Nanoce1779_2|587598 >mRNA_4707-protein ID=mRNA_4707-protein|Name=jgi.p|Nanoce1779_2|587598|organism=Nannochloropsis oceanica|type=polypeptide|length=983bp MLFKHQLPRPLHAKDTPLLEAEAAPSTAGSPTSVLIAAKAGRRRLHIFKW KRFLGVVEAPAEVTCCKLVSMTGEGHQCMSLVVGCRSGSVYRVEDVEARI SAAANGDGRCSTGMLCLGSEHLCFSFPDDTSQIDKLMVGSREGAKESSDQ TVVAVVRRDADTVVHLVWKDKDTPPADYSKVELDSPGHPLACLPAPTDGN TILLHVRHDRNQGPPTPSGGFQLYFTPLVHDTTIKDPQKRQAVLLHVFHK QVVAVLPVPIGGNKGATLVAVERDGLLSLLPDPRAMKTSQSKVEQVRMAQ LSLSPATGGLQAAVLVGNSDIIACLSTRGSVWFSRLSILFPGIFFDSSNH YSALAPPSSSLSSSNINCMRVDCGPEVIALAAPSSSTTSSSTSSSFPSSS PQQPPVLYLLTRRGRILCFQSFPSIPHPYISRVSFLMSGAATAAASSTTP HPLIAGAVNIDADASIDETETLLNQIERACHQTKASHQQIAHTEDAIEKV RTAWTVLAGKGLLETFLDVIHPSSSSPSPSSFLKVRLHNPAENETLPLQG WSLIVRIEAASASAAQGPSALLLPVISQPAAAVLSGASWGLDDIGPGEDF EAHMVLPVTGSLLPHTVRVTLCCPFAGAGDGRSDARASSPRVQQQKEVGV CLELGSRPLDVLDLARPPKTVPFTPAGMRTMEATAAKRGRNQNWEGSLAQ LLFEKVTCNDNEDGYGGERRGRKEECGKRAAGGILKGGDATIPMALPRPL ISSTLRILWPAAPMEMEKGQTMDGDAMSPVCLPALVDLLGPCDGAKIIEE GGGWALALQAPGSKLLLARLLAGKARIRMDDEENSEATGLQLSLTGTDQG LVSLLRAACCQRLGVGGSVRARRLPLTGTRMKTLETAHHQATALAAELQE AIERDVVEVVEEEGTLGQAQEKCLQKRLALARRVVKLAVVLAKEVDEAFL LDLRPDGFQERGFEKEGTEADGMQDEEGYFRN* back to topmRNA from alignment at scaffold_9:443971..447036- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_4707 ID=mRNA_4707|Name=jgi.p|Nanoce1779_2|587598|organism=Nannochloropsis oceanica|type=mRNA|length=3066bp|location=Sequence derived from alignment at scaffold_9:443971..447036- (Nannochloropsis oceanica) ACAGCATGGCAAGAAGGATGGGAAAAAGGAGCTCTTGACCAAGCTACAGG
CCGCCGCCCGAATGCTCTTCAAGCATCAGCTCCCGCGGCCACTCCATGCT
AAGGACACGCCCCTTCTCGAGGCAGAGGCCGCCCCGTCGACCGCCGGGTC
TCCAACCTCTGTTTTAATCGCGGCTAAAGCGGGCCGTCGTCGTCTGCATA
TATTCAAATGGAAACGTTTTCTGGGTGTAGTGGAGGCACCGGCGGAAGTG
ACGTGTTGCAAGCTGGTGTCTATGACGGGGGAGGGTCACCAGTGCATGTC
CTTGGTCGTGGGCTGTAGGTCGGGCAGCGTCTACCGTGTGGAAGACGTCG
AGGCCCGCATATCTGCTGCTGCCAACGGTGATGGACGTTGTAGCACGGGG
ATGCTCTGCCTGGGGTCTGAACACTTGTGCTTTAGCTTCCCAGACGACAC
CTCACAAATCGACAAGCTAATGGTAGGATCAAGGGAGGGGGCAAAAGAGT
CGTCGGATCAAACTGTCGTTGCCGTGGTGAGGAGAGACGCGGACACCGTC
GTACACCTAGTATGGAAGGACAAGGACACGCCCCCAGCTGACTATTCCAA
AGTAGAGCTGGATTCACCCGGGCATCCACTAGCATGTCTTCCGGCTCCCA
CAGACGGCAACACAATCTTACTGCACGTCCGCCACGACCGAAATCAAGGC
CCTCCTACGCCGTCTGGCGGCTTCCAGCTCTACTTCACACCTTTGGTACA
CGATACAACAATAAAGGATCCACAAAAGAGGCAGGCGGTGCTTTTGCATG
TCTTTCATAAGCAAGTGGTTGCGGTGCTACCTGTGCCCATTGGAGGGAAC
AAGGGCGCGACGCTGGTGGCGGTTGAACGAGATGGTCTCCTATCACTCCT
GCCCGATCCCAGGGCAATGAAAACGTCTCAATCAAAGGTGGAGCAGGTTC
GCATGGCCCAGCTTTCACTCAGTCCGGCAACAGGAGGGCTCCAAGCCGCT
GTCCTTGTTGGTAATAGCGACATTATCGCCTGCCTCTCTACTCGAGGCAG
CGTTTGGTTCTCCCGCCTCTCCATCCTCTTTCCTGGCATATTCTTCGACA
GTTCCAATCATTACAGCGCACTGGCGCCTCCCTCTTCTTCTCTGTCCTCC
TCCAATATAAACTGTATGCGCGTGGACTGCGGCCCGGAAGTGATTGCCTT
GGCGGCCCCTTCCTCCTCCACCACCTCCTCCTCCACTTCCTCCTCCTTTC
CCTCCTCCTCTCCACAACAGCCCCCGGTTCTCTATCTACTGACCCGTCGA
GGACGAATTTTGTGCTTTCAAAGCTTTCCTTCCATACCTCATCCTTATAT
TTCACGTGTTTCCTTTCTGATGTCTGGGGCCGCCACCGCCGCCGCCTCTA
GCACCACCCCTCATCCTCTTATCGCTGGTGCCGTAAATATTGATGCTGAT
GCTTCTATAGACGAGACCGAAACCCTCCTCAACCAAATCGAACGAGCCTG
TCATCAGACCAAAGCCTCCCACCAGCAAATCGCTCACACGGAGGACGCAA
TTGAGAAGGTCCGCACGGCCTGGACAGTCCTTGCGGGCAAGGGCCTTCTC
GAAACCTTCCTCGACGTAATCCATCCTTCCTCCTCCTCCCCTTCCCCATC
CTCCTTTCTCAAAGTACGCCTTCACAACCCCGCTGAAAACGAGACCTTGC
CTTTACAGGGGTGGTCGTTGATTGTACGCATCGAAGCAGCATCTGCGTCG
GCCGCCCAGGGACCATCGGCCCTCCTCCTTCCTGTTATCTCTCAGCCGGC
AGCGGCTGTTTTGTCGGGGGCGAGTTGGGGTTTAGATGATATTGGGCCTG
GAGAAGACTTTGAAGCTCACATGGTTTTACCTGTCACTGGTTCACTCTTG
CCGCACACGGTGCGTGTGACGTTGTGTTGTCCCTTTGCTGGTGCTGGTGA
TGGTCGTAGTGACGCAAGGGCGTCCTCACCAAGAGTGCAACAGCAAAAGG
AGGTCGGTGTGTGTTTGGAGCTGGGGTCGCGGCCGCTTGACGTGCTGGAC
TTGGCTCGGCCACCCAAGACGGTGCCCTTCACACCAGCAGGGATGCGGAC
AATGGAGGCAACAGCAGCGAAACGGGGCCGAAATCAGAACTGGGAAGGGA
GTCTCGCGCAATTATTGTTTGAGAAGGTGACATGTAATGATAACGAGGAT
GGATATGGAGGTGAGCGAAGAGGAAGGAAGGAAGAATGTGGTAAAAGGGC
TGCGGGAGGGATACTTAAAGGAGGAGATGCAACAATACCCATGGCCTTGC
CGAGACCGTTGATCTCCTCAACCCTGCGTATTTTGTGGCCTGCTGCGCCG
ATGGAGATGGAAAAGGGGCAAACAATGGATGGGGACGCTATGTCGCCCGT
TTGTTTGCCTGCCTTAGTTGATCTTTTGGGTCCTTGTGACGGGGCCAAAA
TAATAGAGGAAGGGGGAGGATGGGCGCTCGCTCTGCAGGCACCGGGGAGC
AAGCTACTGCTAGCCCGCTTGCTGGCGGGAAAGGCGCGGATTCGGATGGA
CGACGAAGAGAACAGCGAAGCGACAGGGTTGCAGCTCTCCTTGACGGGCA
CTGACCAGGGTCTCGTCAGCTTGTTGCGGGCGGCGTGTTGCCAAAGGCTG
GGAGTGGGAGGTTCGGTGCGCGCGCGACGATTGCCACTGACGGGTACGCG
GATGAAGACTCTAGAGACGGCGCACCATCAGGCGACAGCTTTGGCGGCCG
AGCTTCAGGAGGCAATAGAGCGCGATGTAGTAGAGGTAGTAGAGGAGGAG
GGGACGCTGGGACAGGCACAAGAGAAGTGTCTTCAAAAGAGATTGGCACT
TGCCCGGCGAGTGGTGAAGCTGGCCGTAGTTCTGGCGAAAGAGGTTGATG
AGGCTTTCCTCTTGGATCTGCGGCCGGATGGGTTTCAAGAGAGGGGATTT
GAAAAGGAAGGAACGGAGGCGGACGGTATGCAGGACGAAGAAGGGTATTT
TAGAAACTAACCGACATAGCCATTCGTTGAAAAAGATAAAAAATATTCTG
AAATCCTATGCATCAA back to topCoding sequence (CDS) from alignment at scaffold_9:443971..447036- >mRNA_4707 ID=mRNA_4707|Name=jgi.p|Nanoce1779_2|587598|organism=Nannochloropsis oceanica|type=CDS|length=2949bp|location=Sequence derived from alignment at scaffold_9:443971..447036- (Nannochloropsis oceanica) ATGCTCTTCAAGCATCAGCTCCCGCGGCCACTCCATGCTAAGGACACGCC CCTTCTCGAGGCAGAGGCCGCCCCGTCGACCGCCGGGTCTCCAACCTCTG TTTTAATCGCGGCTAAAGCGGGCCGTCGTCGTCTGCATATATTCAAATGG AAACGTTTTCTGGGTGTAGTGGAGGCACCGGCGGAAGTGACGTGTTGCAA GCTGGTGTCTATGACGGGGGAGGGTCACCAGTGCATGTCCTTGGTCGTGG GCTGTAGGTCGGGCAGCGTCTACCGTGTGGAAGACGTCGAGGCCCGCATA TCTGCTGCTGCCAACGGTGATGGACGTTGTAGCACGGGGATGCTCTGCCT GGGGTCTGAACACTTGTGCTTTAGCTTCCCAGACGACACCTCACAAATCG ACAAGCTAATGGTAGGATCAAGGGAGGGGGCAAAAGAGTCGTCGGATCAA ACTGTCGTTGCCGTGGTGAGGAGAGACGCGGACACCGTCGTACACCTAGT ATGGAAGGACAAGGACACGCCCCCAGCTGACTATTCCAAAGTAGAGCTGG ATTCACCCGGGCATCCACTAGCATGTCTTCCGGCTCCCACAGACGGCAAC ACAATCTTACTGCACGTCCGCCACGACCGAAATCAAGGCCCTCCTACGCC GTCTGGCGGCTTCCAGCTCTACTTCACACCTTTGGTACACGATACAACAA TAAAGGATCCACAAAAGAGGCAGGCGGTGCTTTTGCATGTCTTTCATAAG CAAGTGGTTGCGGTGCTACCTGTGCCCATTGGAGGGAACAAGGGCGCGAC GCTGGTGGCGGTTGAACGAGATGGTCTCCTATCACTCCTGCCCGATCCCA GGGCAATGAAAACGTCTCAATCAAAGGTGGAGCAGGTTCGCATGGCCCAG CTTTCACTCAGTCCGGCAACAGGAGGGCTCCAAGCCGCTGTCCTTGTTGG TAATAGCGACATTATCGCCTGCCTCTCTACTCGAGGCAGCGTTTGGTTCT CCCGCCTCTCCATCCTCTTTCCTGGCATATTCTTCGACAGTTCCAATCAT TACAGCGCACTGGCGCCTCCCTCTTCTTCTCTGTCCTCCTCCAATATAAA CTGTATGCGCGTGGACTGCGGCCCGGAAGTGATTGCCTTGGCGGCCCCTT CCTCCTCCACCACCTCCTCCTCCACTTCCTCCTCCTTTCCCTCCTCCTCT CCACAACAGCCCCCGGTTCTCTATCTACTGACCCGTCGAGGACGAATTTT GTGCTTTCAAAGCTTTCCTTCCATACCTCATCCTTATATTTCACGTGTTT CCTTTCTGATGTCTGGGGCCGCCACCGCCGCCGCCTCTAGCACCACCCCT CATCCTCTTATCGCTGGTGCCGTAAATATTGATGCTGATGCTTCTATAGA CGAGACCGAAACCCTCCTCAACCAAATCGAACGAGCCTGTCATCAGACCA AAGCCTCCCACCAGCAAATCGCTCACACGGAGGACGCAATTGAGAAGGTC CGCACGGCCTGGACAGTCCTTGCGGGCAAGGGCCTTCTCGAAACCTTCCT CGACGTAATCCATCCTTCCTCCTCCTCCCCTTCCCCATCCTCCTTTCTCA AAGTACGCCTTCACAACCCCGCTGAAAACGAGACCTTGCCTTTACAGGGG TGGTCGTTGATTGTACGCATCGAAGCAGCATCTGCGTCGGCCGCCCAGGG ACCATCGGCCCTCCTCCTTCCTGTTATCTCTCAGCCGGCAGCGGCTGTTT TGTCGGGGGCGAGTTGGGGTTTAGATGATATTGGGCCTGGAGAAGACTTT GAAGCTCACATGGTTTTACCTGTCACTGGTTCACTCTTGCCGCACACGGT GCGTGTGACGTTGTGTTGTCCCTTTGCTGGTGCTGGTGATGGTCGTAGTG ACGCAAGGGCGTCCTCACCAAGAGTGCAACAGCAAAAGGAGGTCGGTGTG TGTTTGGAGCTGGGGTCGCGGCCGCTTGACGTGCTGGACTTGGCTCGGCC ACCCAAGACGGTGCCCTTCACACCAGCAGGGATGCGGACAATGGAGGCAA CAGCAGCGAAACGGGGCCGAAATCAGAACTGGGAAGGGAGTCTCGCGCAA TTATTGTTTGAGAAGGTGACATGTAATGATAACGAGGATGGATATGGAGG TGAGCGAAGAGGAAGGAAGGAAGAATGTGGTAAAAGGGCTGCGGGAGGGA TACTTAAAGGAGGAGATGCAACAATACCCATGGCCTTGCCGAGACCGTTG ATCTCCTCAACCCTGCGTATTTTGTGGCCTGCTGCGCCGATGGAGATGGA AAAGGGGCAAACAATGGATGGGGACGCTATGTCGCCCGTTTGTTTGCCTG CCTTAGTTGATCTTTTGGGTCCTTGTGACGGGGCCAAAATAATAGAGGAA GGGGGAGGATGGGCGCTCGCTCTGCAGGCACCGGGGAGCAAGCTACTGCT AGCCCGCTTGCTGGCGGGAAAGGCGCGGATTCGGATGGACGACGAAGAGA ACAGCGAAGCGACAGGGTTGCAGCTCTCCTTGACGGGCACTGACCAGGGT CTCGTCAGCTTGTTGCGGGCGGCGTGTTGCCAAAGGCTGGGAGTGGGAGG TTCGGTGCGCGCGCGACGATTGCCACTGACGGGTACGCGGATGAAGACTC TAGAGACGGCGCACCATCAGGCGACAGCTTTGGCGGCCGAGCTTCAGGAG GCAATAGAGCGCGATGTAGTAGAGGTAGTAGAGGAGGAGGGGACGCTGGG ACAGGCACAAGAGAAGTGTCTTCAAAAGAGATTGGCACTTGCCCGGCGAG TGGTGAAGCTGGCCGTAGTTCTGGCGAAAGAGGTTGATGAGGCTTTCCTC TTGGATCTGCGGCCGGATGGGTTTCAAGAGAGGGGATTTGAAAAGGAAGG AACGGAGGCGGACGGTATGCAGGACGAAGAAGGGTATTTTAGAAACTAA back to top
|