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Properties
| Property Name | Value |
|---|
| TranscriptId | 587522 |
| Track | FilteredModels2 |
| ProteinId | 587436 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_9 | supercontig | scaffold_9:342579..344374 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_4670 ID=mRNA_4670|Name=jgi.p|Nanoce1779_2|587436|organism=Nannochloropsis oceanica|type=mRNA|length=1357bp
TTTATTTTTCACGGGCGGTAAAATCGATTGGGTAAAATACGGCGCTTTTA
TGTTGTTTTCAAAGTTTCTCTCAACGGCAGACCGAGCGTTGGATCGAGAA
TTTTCCACAACATACCTCACCTCACGTACCACTTAGACCCCAAGCAAAAA
CAGATTTACAATAGATTCCAGCTTCTCGGTTGTGAGTGCTTTAGGTCCAG
TAGCAATGGCGACGACTTTAGAGGTCCCAGTAGTGTCCGACGAGGTCGTC
AAGGCCTGGCTACCCATGTACAAGCCTATAGATAAGCCTCGGCTTCGTAT
TTTGTGCTTTCCCAGCGCGGGAAGCGCCGAGAACATCTATACGGGGTTGG
CAGTCCGGGAGAAGCAACGGACGCCCAACAAGCTCATGGCTTGGGCCGTA
GACGCCCAAGCCGAGGTGCTAGCCGTCCAGTACCCCGGTCGGGAACAGCG
ACGAAAAGAGCCTTTTGTTAAGAGCTGTCAGGCAATGGCGGCAGCCCTCT
TTCCTGTCATCCAACCCAAGCTGCGGAAGGAGGACGTGCCCTACGTTATT
GTCGCGCACAGCTGTGGGAGTTGGATCGCATACGAGTTGCTGAAGCTGCT
GCGGGCACGGGACATGCCCATGCCCAAGATGTTTTTTGTGTCGTGCATGG
CCTCTCCGGACATTGCAGCGAGTGCCAAGCCGTGGAAGTCGAACAAGGAG
ATGAGCGTGGCCCAGCTACAAGCCGAGTGCCGCCTGTGGGATGTGAATGA
GGTGGTCTTTCGCCCAGACGTCTGGCCCACCTTTGAGCCTCTTCTTCGCG
CGGATTTTTCGCTCTTTGATCAGTACACATTTGCCTCTGAGGGTTTTTGC
CCCTTCAATTTTCCCATTCACTGTTACTTTGCCGCAAATGATCGCAAGAT
TTCAAGGAAAATGGTGGAGGGCTGGCAGAGGTTCACGACCTCGGACTTTG
ACGTGGATTTGGTGCAGGGGAATCATCTCTTTGTTTACAATGCAGACGTG
CGAGACGATTGGTTTGAGAGCATTACGGACTTCCTAACGGGAGAAGGCTT
TTAGTTGTTGAAACTCGCACAGAACAGCAGCCGAGAAGTGGTCGAACGCA
ACAAAACCATGTCCGCGTCAAGAAATGCAAGCAGCAGTACGCCATTGTTG
TGACACCATTTTTTCACTTTGCCTCATTCCTTGCTCAGTCTCTGAGGGAG
TTGTGATGAAGGAAGGGGGGGTGGCGATTGTGAGCTTATTCTTCTTCGCC
ATAATTTCTTCTTCGGCCTTGTCGCCTTAAGGAGGAAGGCGAACAGTGGC
GCTGCCGGATACCAAAGAAGAAATTGAAAAGAACAAATAATGCGTAATTA
ATTTGGC back to topprotein sequence of jgi.p|Nanoce1779_2|587436 >mRNA_4670-protein ID=mRNA_4670-protein|Name=jgi.p|Nanoce1779_2|587436|organism=Nannochloropsis oceanica|type=polypeptide|length=283bp
MATTLEVPVVSDEVVKAWLPMYKPIDKPRLRILCFPSAGSAENIYTGLAV
REKQRTPNKLMAWAVDAQAEVLAVQYPGREQRRKEPFVKSCQAMAAALFP
VIQPKLRKEDVPYVIVAHSCGSWIAYELLKLLRARDMPMPKMFFVSCMAS
PDIAASAKPWKSNKEMSVAQLQAECRLWDVNEVVFRPDVWPTFEPLLRAD
FSLFDQYTFASEGFCPFNFPIHCYFAANDRKISRKMVEGWQRFTTSDFDV
DLVQGNHLFVYNADVRDDWFESITDFLTGEGF* back to topmRNA from alignment at scaffold_9:342579..344374+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_4670 ID=mRNA_4670|Name=jgi.p|Nanoce1779_2|587436|organism=Nannochloropsis oceanica|type=mRNA|length=1796bp|location=Sequence derived from alignment at scaffold_9:342579..344374+ (Nannochloropsis oceanica)
TTTATTTTTCACGGGCGGTAAAATCGATTGGGTAAAATACGGCGCTTTTA
TGTTGTTTTCAAAGTTTCTCTCAACGGCAGACCGAGCGTTGGATCGAGAA
TTTTCCACAACATACCTCACCTCACGTACCACTTAGACCCCAAGCAAAAA
CAGATTTACAATAGATTCCAGCTTCTCGGTTGTGAGTGCTTTAGGTCCAG
TAGCAATGGTAAGTGGACAAGGGAACCCGTCGCGATTTCTACCTTCACGC
TCTCCTTCCCCTGTGTACCTCACCAACACTTAGGCGACGACTTTAGAGGT
CCCAGTAGTGTCCGACGAGGTCGTCAAGGCCTGGCTACCCATGTACAAGC
CTATAGATAAGCCTCGGCTTCGTATTTTGTGCTTTCCCAGCGCGGGAAGC
GCCGAGAACATCTATACGGGGTTGGCAGTCCGGGAGAAGCAACGGACGCC
CAACAAGCTCATGGCTTGGGCCGTAGACGCCCAAGCCGAGGTGCTAGCCG
TCCAGTACCCCGGTCGGGAACAGCGACGAAAAGAGCCTTTTGTTAAGAGC
TGTCAGGCAATGGCGGCAGCCCTCTTTCCTGTCATCCAACCCAAGCTGCG
GAAGGAGGACGTGCCCTACGTTATTGTCGCGCACAGCTGTGGGAGTTGGA
TCGCATACGAGTTGCTGAAGCTGCTGCGGGCACGGGACATGCCCATGCCC
AAGATGTTTTTTGTGTCGTGCATGGCCTCTCCGGACATTGCAGCGAGTGC
CAAGGTGAGTAAGTGGGGGGTTTGGGTTGGAGAGACAGACCGCTTTGTGA
GGCCTCTCGGGGATGAGGGCGTGCGTAGGTTGACGATCCACCATACGTGT
ACACATATCCATGCATAAGTTCTTATTTCTCCATTTACTCATTATCCCTA
CAGCCGTGGAAGTCGAACAAGGAGATGAGCGTGGCCCAGCTACAAGCCGA
GTGCCGCCTGTGGGATGTGAATGAGGTGGTCTTTCGCCCAGACGTCTGGC
CCACCTTTGAGCCTCTTCTTCGCGCGGATTTTTCGCTCTTTGATCAGTAC
ACATTTGCCTCTGAGGGTAAGCAGCAGAGAGAGGATGGAGTGTGTTTGCA
CGATGCCAGCTAGCTCTGTGGGCAGAAGTGATGGAGTCATCCCGGACATT
ATTTGTTGCAAGCCGTGCTTAAATTCGTTCCTTACTCGGCAAAATGCAGG
TTTTTGCCCCTTCAATTTTCCCATTCACTGTTACTTTGCCGCAAATGATC
GCAAGATTTCAAGGGTACGCACTTACAAAAACAGCTTTATGTCACCCGAT
CAAACACTGCTGCTTCTTATTTTTTTTAATTCTAACAACCCAACAGAAAA
TGGTGGAGGGCTGGCAGAGGTTCACGACCTCGGACTTTGACGTGGATTTG
GTGCAGGGGAATCATCTCTTTGTTTACAATGCAGACGTGCGAGACGATTG
GTTTGAGAGCATTACGGACTTCCTAACGGGAGAAGGCTTTTAGTTGTTGA
AACTCGCACAGAACAGCAGCCGAGAAGTGGTCGAACGCAACAAAACCATG
TCCGCGTCAAGAAATGCAAGCAGCAGTACGCCATTGTTGTGACACCATTT
TTTCACTTTGCCTCATTCCTTGCTCAGTCTCTGAGGGAGTTGTGATGAAG
GAAGGGGGGGTGGCGATTGTGAGCTTATTCTTCTTCGCCATAATTTCTTC
TTCGGCCTTGTCGCCTTAAGGAGGAAGGCGAACAGTGGCGCTGCCGGATA
CCAAAGAAGAAATTGAAAAGAACAAATAATGCGTAATTAATTTGGC back to topCoding sequence (CDS) from alignment at scaffold_9:342579..344374+ >mRNA_4670 ID=mRNA_4670|Name=jgi.p|Nanoce1779_2|587436|organism=Nannochloropsis oceanica|type=CDS|length=4245bp|location=Sequence derived from alignment at scaffold_9:342579..344374+ (Nannochloropsis oceanica)
ATGGCGACGACTTTAGAGGTCCCAGTAGTGTCCGACGAGGTCGTCAAGGC
CTGGCTACCCATGTACAAGCCTATAGATAAGCCTCGGCTTCGTATTTTGT
GCTTTCCCAGCGCGGGAAGCGCCGAGAACATCTATACGGGGTTGGCAGTC
CGGGAGAAGCAACGGACGCCCAACAAGCTCATGGCTTGGGCCGTAGACGC
CCAAGCCGAGGTGCTAGCCGTCCAGTACCCCGGTCGGGAACAGCGACGAA
AAGAGCCTTTTGTTAAGAGCTGTCAGGCAATGGCGGCAGCCCTCTTTCCT
GTCATCCAACCCAAGCTGCGGAAGGAGGACGTGCCCTACGTTATTGTCGC
GCACAGCTGTGGGAGTTGGATCGCATACGAGTTGCTGAAGCTGCTGCGGG
CACGGGACATGCCCATGCCCAAGATGTTTTTTGTGTCGTGCATGGCCTCT
CCGGACATTGCAGCGAGTGCCAAGCCGTGGAAGTCGAACAAGGAGATGAG
CGTGGCCCAGCTACAAGCCGAGTGCCGCCTGTGGGATGTGAATGAGGTGG
TCTTTCGCCCAGACGTCTGGCCCACCTTTGAGCCTCTTCTTCGCGCGGAT
TTTTCGCTCTTTGATCAGTACACATTTGCCTCTGAGGGTTTTTGCCCCTT
CAATTTTCCCATTCACTGTTACTTTGCCGCAAATGATCGCAAGATTTCAA
GGAAAATGGTGGAGGGCTGGCAGAGGTTCACGACCTCGGACTTTGACGTG
GATTTGGTGCAGGGGAATCATCTCTTTGTTTACAATGCAGACGTGCGAGA
CGATTGGTTTGAGAGCATTACGGACTTCCTAACGGGAGAAGGCTTTTAGA
TGGCGACGACTTTAGAGGTCCCAGTAGTGTCCGACGAGGTCGTCAAGGCC
TGGCTACCCATGTACAAGCCTATAGATAAGCCTCGGCTTCGTATTTTGTG
CTTTCCCAGCGCGGGAAGCGCCGAGAACATCTATACGGGGTTGGCAGTCC
GGGAGAAGCAACGGACGCCCAACAAGCTCATGGCTTGGGCCGTAGACGCC
CAAGCCGAGGTGCTAGCCGTCCAGTACCCCGGTCGGGAACAGCGACGAAA
AGAGCCTTTTGTTAAGAGCTGTCAGGCAATGGCGGCAGCCCTCTTTCCTG
TCATCCAACCCAAGCTGCGGAAGGAGGACGTGCCCTACGTTATTGTCGCG
CACAGCTGTGGGAGTTGGATCGCATACGAGTTGCTGAAGCTGCTGCGGGC
ACGGGACATGCCCATGCCCAAGATGTTTTTTGTGTCGTGCATGGCCTCTC
CGGACATTGCAGCGAGTGCCAAGCCGTGGAAGTCGAACAAGGAGATGAGC
GTGGCCCAGCTACAAGCCGAGTGCCGCCTGTGGGATGTGAATGAGGTGGT
CTTTCGCCCAGACGTCTGGCCCACCTTTGAGCCTCTTCTTCGCGCGGATT
TTTCGCTCTTTGATCAGTACACATTTGCCTCTGAGGGTTTTTGCCCCTTC
AATTTTCCCATTCACTGTTACTTTGCCGCAAATGATCGCAAGATTTCAAG
GAAAATGGTGGAGGGCTGGCAGAGGTTCACGACCTCGGACTTTGACGTGG
ATTTGGTGCAGGGGAATCATCTCTTTGTTTACAATGCAGACGTGCGAGAC
GATTGGTTTGAGAGCATTACGGACTTCCTAACGGGAGAAGGCTTTTAGAT
GGCGACGACTTTAGAGGTCCCAGTAGTGTCCGACGAGGTCGTCAAGGCCT
GGCTACCCATGTACAAGCCTATAGATAAGCCTCGGCTTCGTATTTTGTGC
TTTCCCAGCGCGGGAAGCGCCGAGAACATCTATACGGGGTTGGCAGTCCG
GGAGAAGCAACGGACGCCCAACAAGCTCATGGCTTGGGCCGTAGACGCCC
AAGCCGAGGTGCTAGCCGTCCAGTACCCCGGTCGGGAACAGCGACGAAAA
GAGCCTTTTGTTAAGAGCTGTCAGGCAATGGCGGCAGCCCTCTTTCCTGT
CATCCAACCCAAGCTGCGGAAGGAGGACGTGCCCTACGTTATTGTCGCGC
ACAGCTGTGGGAGTTGGATCGCATACGAGTTGCTGAAGCTGCTGCGGGCA
CGGGACATGCCCATGCCCAAGATGTTTTTTGTGTCGTGCATGGCCTCTCC
GGACATTGCAGCGAGTGCCAAGCCGTGGAAGTCGAACAAGGAGATGAGCG
TGGCCCAGCTACAAGCCGAGTGCCGCCTGTGGGATGTGAATGAGGTGGTC
TTTCGCCCAGACGTCTGGCCCACCTTTGAGCCTCTTCTTCGCGCGGATTT
TTCGCTCTTTGATCAGTACACATTTGCCTCTGAGGGTTTTTGCCCCTTCA
ATTTTCCCATTCACTGTTACTTTGCCGCAAATGATCGCAAGATTTCAAGG
AAAATGGTGGAGGGCTGGCAGAGGTTCACGACCTCGGACTTTGACGTGGA
TTTGGTGCAGGGGAATCATCTCTTTGTTTACAATGCAGACGTGCGAGACG
ATTGGTTTGAGAGCATTACGGACTTCCTAACGGGAGAAGGCTTTTAGATG
GCGACGACTTTAGAGGTCCCAGTAGTGTCCGACGAGGTCGTCAAGGCCTG
GCTACCCATGTACAAGCCTATAGATAAGCCTCGGCTTCGTATTTTGTGCT
TTCCCAGCGCGGGAAGCGCCGAGAACATCTATACGGGGTTGGCAGTCCGG
GAGAAGCAACGGACGCCCAACAAGCTCATGGCTTGGGCCGTAGACGCCCA
AGCCGAGGTGCTAGCCGTCCAGTACCCCGGTCGGGAACAGCGACGAAAAG
AGCCTTTTGTTAAGAGCTGTCAGGCAATGGCGGCAGCCCTCTTTCCTGTC
ATCCAACCCAAGCTGCGGAAGGAGGACGTGCCCTACGTTATTGTCGCGCA
CAGCTGTGGGAGTTGGATCGCATACGAGTTGCTGAAGCTGCTGCGGGCAC
GGGACATGCCCATGCCCAAGATGTTTTTTGTGTCGTGCATGGCCTCTCCG
GACATTGCAGCGAGTGCCAAGCCGTGGAAGTCGAACAAGGAGATGAGCGT
GGCCCAGCTACAAGCCGAGTGCCGCCTGTGGGATGTGAATGAGGTGGTCT
TTCGCCCAGACGTCTGGCCCACCTTTGAGCCTCTTCTTCGCGCGGATTTT
TCGCTCTTTGATCAGTACACATTTGCCTCTGAGGGTTTTTGCCCCTTCAA
TTTTCCCATTCACTGTTACTTTGCCGCAAATGATCGCAAGATTTCAAGGA
AAATGGTGGAGGGCTGGCAGAGGTTCACGACCTCGGACTTTGACGTGGAT
TTGGTGCAGGGGAATCATCTCTTTGTTTACAATGCAGACGTGCGAGACGA
TTGGTTTGAGAGCATTACGGACTTCCTAACGGGAGAAGGCTTTTAGATGG
CGACGACTTTAGAGGTCCCAGTAGTGTCCGACGAGGTCGTCAAGGCCTGG
CTACCCATGTACAAGCCTATAGATAAGCCTCGGCTTCGTATTTTGTGCTT
TCCCAGCGCGGGAAGCGCCGAGAACATCTATACGGGGTTGGCAGTCCGGG
AGAAGCAACGGACGCCCAACAAGCTCATGGCTTGGGCCGTAGACGCCCAA
GCCGAGGTGCTAGCCGTCCAGTACCCCGGTCGGGAACAGCGACGAAAAGA
GCCTTTTGTTAAGAGCTGTCAGGCAATGGCGGCAGCCCTCTTTCCTGTCA
TCCAACCCAAGCTGCGGAAGGAGGACGTGCCCTACGTTATTGTCGCGCAC
AGCTGTGGGAGTTGGATCGCATACGAGTTGCTGAAGCTGCTGCGGGCACG
GGACATGCCCATGCCCAAGATGTTTTTTGTGTCGTGCATGGCCTCTCCGG
ACATTGCAGCGAGTGCCAAGCCGTGGAAGTCGAACAAGGAGATGAGCGTG
GCCCAGCTACAAGCCGAGTGCCGCCTGTGGGATGTGAATGAGGTGGTCTT
TCGCCCAGACGTCTGGCCCACCTTTGAGCCTCTTCTTCGCGCGGATTTTT
CGCTCTTTGATCAGTACACATTTGCCTCTGAGGGTTTTTGCCCCTTCAAT
TTTCCCATTCACTGTTACTTTGCCGCAAATGATCGCAAGATTTCAAGGAA
AATGGTGGAGGGCTGGCAGAGGTTCACGACCTCGGACTTTGACGTGGATT
TGGTGCAGGGGAATCATCTCTTTGTTTACAATGCAGACGTGCGAGACGAT
TGGTTTGAGAGCATTACGGACTTCCTAACGGGAGAAGGCTTTTAG back to top
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